RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 KIF13AQ9H1H9 1805 aa11.05□□□□□ -0.64
CDC42-205ENST00000498236 ZMYM4Q5VZL5 1548 aa11.04□□□□□ -0.64
CDC42-205ENST00000498236 EMP3P54852 163 aa11.04□□□□□ -0.64
CDC42-205ENST00000498236 BCORL1Q5H9F3 1711 aa11.04□□□□□ -0.64
CDC42-205ENST00000498236 VWDEQ8N2E2 1590 aa11.03□□□□□ -0.64
CDC42-205ENST00000498236 NEUROD1Q13562 356 aa11.03□□□□□ -0.64
CDC42-205ENST00000498236 KCNV2Q8TDN2 545 aa11.03□□□□□ -0.64
CDC42-205ENST00000498236 A2MP01023 1474 aa11.03□□□□□ -0.64
CDC42-205ENST00000498236 FRMPD1Q5SYB0 1578 aa11.03□□□□□ -0.64
CDC42-205ENST00000498236 TONSLQ96HA7 1378 aa11.03□□□□□ -0.64
CDC42-205ENST00000498236 G3V3G9 751 aa11.02□□□□□ -0.65
CDC42-205ENST00000498236 ILDR1Q86SU0 546 aaPredicted RBP11.02□□□□□ -0.65
CDC42-205ENST00000498236 PRDM15P57071 1507 aaPredicted RBP11.02□□□□□ -0.65
CDC42-205ENST00000498236 ATP10AO60312 1499 aa11.01□□□□□ -0.65
CDC42-205ENST00000498236 PPP1R15AO75807 674 aaPredicted RBP11.01□□□□□ -0.65
CDC42-205ENST00000498236 RNF17Q9BXT8 1623 aaKnown RBP11.01□□□□□ -0.65
CDC42-205ENST00000498236 ABCA6Q8N139 1617 aa11□□□□□ -0.65
CDC42-205ENST00000498236 RAPGEF3O95398 923 aa11□□□□□ -0.65
CDC42-205ENST00000498236 DIP2CQ9Y2E4 1556 aa10.99□□□□□ -0.65
CDC42-205ENST00000498236 MROH1Q8NDA8 1641 aa10.99□□□□□ -0.65
CDC42-205ENST00000498236 KANK1Q14678 1352 aa10.99□□□□□ -0.65
CDC42-205ENST00000498236 LMTK2Q8IWU2 1503 aa10.99□□□□□ -0.65
CDC42-205ENST00000498236 PDE4AP27815 886 aa10.98□□□□□ -0.65
CDC42-205ENST00000498236 MYT1LQ9UL68 1186 aa10.98□□□□□ -0.65
CDC42-205ENST00000498236 REREQ9P2R6 1566 aa10.98□□□□□ -0.65
CDC42-205ENST00000498236 ZNF316A6NFI3 1004 aaPredicted RBP10.97□□□□□ -0.65
CDC42-205ENST00000498236 KIF3BO15066 747 aa10.97□□□□□ -0.65
CDC42-205ENST00000498236 E2F4Q16254 413 aa10.97□□□□□ -0.65
CDC42-205ENST00000498236 TET3O43151 1660 aa10.97□□□□□ -0.65
CDC42-205ENST00000498236 TSPOAP1O95153 1857 aa10.97□□□□□ -0.65
CDC42-205ENST00000498236 PLA2R1Q13018 1463 aa10.96□□□□□ -0.65
CDC42-205ENST00000498236 NCKAP5LQ9HCH0 1330 aa10.96□□□□□ -0.65
CDC42-205ENST00000498236 DPY19L2Q6NUT2 758 aa10.96□□□□□ -0.65
CDC42-205ENST00000498236 LARP6Q9BRS8 491 aaKnown RBP10.96□□□□□ -0.65
CDC42-205ENST00000498236 BOLA1Q9Y3E2 137 aa10.96□□□□□ -0.65
CDC42-205ENST00000498236 PTPRTO14522 1441 aa10.95□□□□□ -0.66
CDC42-205ENST00000498236 YEATS2Q9ULM3 1422 aa10.95□□□□□ -0.66
CDC42-205ENST00000498236 FAM205CA6NFA0 338 aa10.95□□□□□ -0.66
CDC42-205ENST00000498236 ARHGEF1Q92888 912 aaKnown RBP10.95□□□□□ -0.66
CDC42-205ENST00000498236 L3MBTL2Q969R5 705 aa10.95□□□□□ -0.66
CDC42-205ENST00000498236 HS3ST6Q96QI5 342 aa10.94□□□□□ -0.66
CDC42-205ENST00000498236 CRISPLD2Q9H0B8 497 aa10.94□□□□□ -0.66
CDC42-205ENST00000498236 E9PCH4 1651 aa10.94□□□□□ -0.66
CDC42-205ENST00000498236 AGLP35573 1532 aa10.94□□□□□ -0.66
CDC42-205ENST00000498236 COL17A1Q9UMD9 1497 aaPredicted RBP10.93□□□□□ -0.66
CDC42-205ENST00000498236 CCDC144AA2RUR9 1427 aa10.93□□□□□ -0.66
CDC42-205ENST00000498236 TRPM2O94759 1503 aa10.93□□□□□ -0.66
CDC42-205ENST00000498236 EFCAB6Q5THR3 1501 aa10.93□□□□□ -0.66
CDC42-205ENST00000498236 MFSD10Q14728 455 aa10.92□□□□□ -0.66
CDC42-205ENST00000498236 ARHGEF40Q8TER5 1519 aa10.91□□□□□ -0.66
CDC42-205ENST00000498236 UHRF1BP1Q6BDS2 1440 aa10.91□□□□□ -0.66
CDC42-205ENST00000498236 NEURL4Q96JN8 1562 aa10.9□□□□□ -0.66
CDC42-205ENST00000498236 ABCC3O15438 1527 aa10.9□□□□□ -0.66
CDC42-205ENST00000498236 ZC3H13Q5T200 1668 aaKnown RBP10.9□□□□□ -0.66
CDC42-205ENST00000498236 DDX27Q96GQ7 796 aaKnown RBP10.9□□□□□ -0.66
CDC42-205ENST00000498236 SPHKAPQ2M3C7 1700 aa10.89□□□□□ -0.67
CDC42-205ENST00000498236 POTEB3A0JP26 581 aa10.89□□□□□ -0.67
CDC42-205ENST00000498236 POTEBQ6S5H4 581 aa10.89□□□□□ -0.67
CDC42-205ENST00000498236 ZNF710Q8N1W2 664 aa10.89□□□□□ -0.67
CDC42-205ENST00000498236 ARHGAP31Q2M1Z3 1444 aa10.89□□□□□ -0.67
CDC42-205ENST00000498236 SPATA31E1Q6ZUB1 1445 aa10.87□□□□□ -0.67
CDC42-205ENST00000498236 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
CDC42-205ENST00000498236 KRTAP3-2Q9BYR7 98 aa10.87□□□□□ -0.67
CDC42-205ENST00000498236 CEP152O94986 1710 aa10.87□□□□□ -0.67
CDC42-205ENST00000498236 WASHC2CQ9Y4E1 1318 aa10.86□□□□□ -0.67
CDC42-205ENST00000498236 NPATQ14207 1427 aa10.86□□□□□ -0.67
CDC42-205ENST00000498236 HOXB3P14651 431 aaPredicted RBP10.86□□□□□ -0.67
CDC42-205ENST00000498236 DOK7Q18PE1 504 aa10.86□□□□□ -0.67
CDC42-205ENST00000498236 GGT6Q6P531 493 aa10.86□□□□□ -0.67
CDC42-205ENST00000498236 STAC3Q96MF2 364 aa10.86□□□□□ -0.67
CDC42-205ENST00000498236 CAMSAP1Q5T5Y3 1602 aa10.86□□□□□ -0.67
CDC42-205ENST00000498236 CNTLNQ9NXG0 1405 aa10.85□□□□□ -0.67
CDC42-205ENST00000498236 TULP1O00294 542 aaPredicted RBP10.85□□□□□ -0.67
CDC42-205ENST00000498236 NBPF8Q3BBV2 869 aa10.85□□□□□ -0.67
CDC42-205ENST00000498236 CLTCL1P53675 1640 aa10.84□□□□□ -0.67
CDC42-205ENST00000498236 HOXB1P14653 301 aaPredicted RBP10.84□□□□□ -0.67
CDC42-205ENST00000498236 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.84□□□□□ -0.671e-7■■■■□ 25.8
CDC42-205ENST00000498236 NOS1P29475 1434 aa10.84□□□□□ -0.67
CDC42-205ENST00000498236 RALGAPBQ86X10 1494 aa10.83□□□□□ -0.68
CDC42-205ENST00000498236 MICALL2Q8IY33 904 aa10.83□□□□□ -0.68
CDC42-205ENST00000498236 GPHNQ9NQX3 736 aaPredicted RBP10.83□□□□□ -0.68
CDC42-205ENST00000498236 RIMBP2O15034 1052 aa10.82□□□□□ -0.68
CDC42-205ENST00000498236 CAMK2BQ13554 666 aa10.82□□□□□ -0.68
CDC42-205ENST00000498236 DIEXFQ68CQ4 756 aaKnown RBP10.82□□□□□ -0.68
CDC42-205ENST00000498236 LMOD2Q6P5Q4 547 aa10.82□□□□□ -0.68
CDC42-205ENST00000498236 ARIH1Q9Y4X5 557 aaPredicted RBP10.82□□□□□ -0.68
CDC42-205ENST00000498236 PRAG1Q86YV5 1406 aa10.82□□□□□ -0.68
CDC42-205ENST00000498236 SIGLEC1Q9BZZ2 1709 aa10.81□□□□□ -0.68
CDC42-205ENST00000498236 PPP1R15BQ5SWA1 713 aa10.81□□□□□ -0.68
CDC42-205ENST00000498236 DCAF11Q8TEB1 546 aa10.81□□□□□ -0.68
CDC42-205ENST00000498236 ERBB3P21860 1342 aa10.81□□□□□ -0.68
CDC42-205ENST00000498236 PIK3C2BO00750 1634 aa10.8□□□□□ -0.68
CDC42-205ENST00000498236 EIF4G2P78344 907 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDC42-205ENST00000498236 ADGRB3O60242 1522 aa10.79□□□□□ -0.68
CDC42-205ENST00000498236 SEMA3EO15041 775 aa10.79□□□□□ -0.68
CDC42-205ENST00000498236 GPRASP1Q5JY77 1395 aa10.78□□□□□ -0.68
CDC42-205ENST00000498236 TESPA1A2RU30 521 aaPredicted RBP10.78□□□□□ -0.68
CDC42-205ENST00000498236 SLC52A1Q9NWF4 448 aa10.78□□□□□ -0.68
CDC42-205ENST00000498236 KIF1BO60333 1816 aa10.78□□□□□ -0.68
CDC42-205ENST00000498236 MYOM2P54296 1465 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms