RNA–Protein interactions for RNA: ENST00000498122.4

CHEK1-205, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-205ENST00000498122 CCER1Q8TC90 406 aaPredicted RBP12.81□□□□□ -0.36
CHEK1-205ENST00000498122 XIRP1Q702N8 1843 aaKnown RBP12.81□□□□□ -0.36
CHEK1-205ENST00000498122 CLSPNQ9HAW4 1339 aa12.8□□□□□ -0.36
CHEK1-205ENST00000498122 TONSLQ96HA7 1378 aa12.8□□□□□ -0.36
CHEK1-205ENST00000498122 NCOA3Q9Y6Q9 1424 aa12.79□□□□□ -0.36
CHEK1-205ENST00000498122 TRAK1Q9UPV9 953 aa12.78□□□□□ -0.36
CHEK1-205ENST00000498122 C19orf44Q9H6X5 657 aa12.77□□□□□ -0.37
CHEK1-205ENST00000498122 SIRT1Q96EB6 747 aa12.76□□□□□ -0.37
CHEK1-205ENST00000498122 PRAM1Q96QH2 718 aa12.76□□□□□ -0.37
CHEK1-205ENST00000498122 ADGRL3Q9HAR2 1447 aa12.76□□□□□ -0.37
CHEK1-205ENST00000498122 LAMC1P11047 1609 aa12.75□□□□□ -0.37
CHEK1-205ENST00000498122 MSH6P52701 1360 aa12.75□□□□□ -0.37
CHEK1-205ENST00000498122 PIP4K2BP78356 416 aa12.75□□□□□ -0.37
CHEK1-205ENST00000498122 FAM135BQ49AJ0 1406 aa12.75□□□□□ -0.37
CHEK1-205ENST00000498122 C14orf37Q86TY3 774 aa12.75□□□□□ -0.37
CHEK1-205ENST00000498122 TOM1O60784 492 aa12.74□□□□□ -0.37
CHEK1-205ENST00000498122 SAFB2Q14151 953 aaKnown RBP eCLIP12.74□□□□□ -0.37
CHEK1-205ENST00000498122 DLC1Q96QB1 1528 aa12.73□□□□□ -0.37
CHEK1-205ENST00000498122 GPRASP1Q5JY77 1395 aa12.72□□□□□ -0.37
CHEK1-205ENST00000498122 KNDC1Q76NI1 1749 aa12.72□□□□□ -0.37
CHEK1-205ENST00000498122 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.72□□□□□ -0.37
CHEK1-205ENST00000498122 SLAIN2Q9P270 581 aa12.72□□□□□ -0.37
CHEK1-205ENST00000498122 DCCP43146 1447 aa12.71□□□□□ -0.37
CHEK1-205ENST00000498122 MST1RQ04912 1400 aa12.71□□□□□ -0.37
CHEK1-205ENST00000498122 NALCNQ8IZF0 1738 aa12.71□□□□□ -0.37
CHEK1-205ENST00000498122 KIAA1210Q9ULL0 1709 aa12.71□□□□□ -0.37
CHEK1-205ENST00000498122 TRPM1Q7Z4N2 1603 aa12.71□□□□□ -0.37
CHEK1-205ENST00000498122 ROCK2O75116 1388 aaKnown RBP12.7□□□□□ -0.38
CHEK1-205ENST00000498122 ATF3P18847 181 aa12.7□□□□□ -0.38
CHEK1-205ENST00000498122 HSPA1LP34931 641 aa12.7□□□□□ -0.38
CHEK1-205ENST00000498122 CADPS2Q86UW7 1296 aa12.7□□□□□ -0.38
CHEK1-205ENST00000498122 POGKQ9P215 609 aa12.7□□□□□ -0.38
CHEK1-205ENST00000498122 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
CHEK1-205ENST00000498122 RALGAPBQ86X10 1494 aa12.7□□□□□ -0.38
CHEK1-205ENST00000498122 MINK1Q8N4C8 1332 aaPredicted RBP12.69□□□□□ -0.38
CHEK1-205ENST00000498122 HIRIP3Q9BW71 556 aaPredicted RBP12.69□□□□□ -0.38
CHEK1-205ENST00000498122 NUTM2FA1L443 756 aa12.68□□□□□ -0.38
CHEK1-205ENST00000498122 BRINP3Q76B58 766 aa12.68□□□□□ -0.38
CHEK1-205ENST00000498122 C1orf167Q5SNV9 1468 aa12.67□□□□□ -0.38
CHEK1-205ENST00000498122 ORAI2Q96SN7 254 aa12.67□□□□□ -0.38
CHEK1-205ENST00000498122 CARD11Q9BXL7 1154 aa12.67□□□□□ -0.38
CHEK1-205ENST00000498122 CDC42BPGQ6DT37 1551 aa12.66□□□□□ -0.38
CHEK1-205ENST00000498122 DDX17Q92841 729 aaKnown RBP12.66□□□□□ -0.38
CHEK1-205ENST00000498122 ARHGEF28Q8N1W1 1705 aaKnown RBP12.65□□□□□ -0.38
CHEK1-205ENST00000498122 PRR36Q9H6K5 1346 aa12.65□□□□□ -0.38
CHEK1-205ENST00000498122 CENPJQ9HC77 1338 aaPredicted RBP12.64□□□□□ -0.39
CHEK1-205ENST00000498122 WASLO00401 505 aaPredicted RBP12.64□□□□□ -0.39
CHEK1-205ENST00000498122 ABCB7O75027 752 aa12.63□□□□□ -0.39
CHEK1-205ENST00000498122 NPM3O75607 178 aaKnown RBP12.63□□□□□ -0.39
CHEK1-205ENST00000498122 ADGRB2O60241 1585 aa12.63□□□□□ -0.39
CHEK1-205ENST00000498122 MED1Q15648 1581 aaPredicted RBP12.63□□□□□ -0.39
CHEK1-205ENST00000498122 ROBO1Q9Y6N7 1651 aa12.63□□□□□ -0.39
CHEK1-205ENST00000498122 CDK19Q9BWU1 502 aa12.62□□□□□ -0.39
CHEK1-205ENST00000498122 ESCO1Q5FWF5 840 aa12.61□□□□□ -0.39
CHEK1-205ENST00000498122 FMN2Q9NZ56 1722 aa12.6□□□□□ -0.39
CHEK1-205ENST00000498122 TESK2Q96S53 571 aa12.6□□□□□ -0.39
CHEK1-205ENST00000498122 TULP4Q9NRJ4 1543 aa12.6□□□□□ -0.39
CHEK1-205ENST00000498122 USP32Q8NFA0 1604 aa12.59□□□□□ -0.39
CHEK1-205ENST00000498122 ST20-MTHFSA0A0A6YYL1 179 aa12.59□□□□□ -0.39
CHEK1-205ENST00000498122 CABP2Q9NPB3 220 aa12.59□□□□□ -0.39
CHEK1-205ENST00000498122 ATP7BP35670 1465 aa12.59□□□□□ -0.39
CHEK1-205ENST00000498122 USP47Q96K76 1375 aa12.58□□□□□ -0.4
CHEK1-205ENST00000498122 FOXO3O43524 673 aa12.58□□□□□ -0.4
CHEK1-205ENST00000498122 ANKARQ7Z5J8 1434 aa12.58□□□□□ -0.4
CHEK1-205ENST00000498122 NUDT16Q96DE0 195 aaKnown RBP12.58□□□□□ -0.4
CHEK1-205ENST00000498122 AHDC1Q5TGY3 1603 aaPredicted RBP12.58□□□□□ -0.4
CHEK1-205ENST00000498122 EIF3AQ14152 1382 aaKnown RBP12.57□□□□□ -0.4
CHEK1-205ENST00000498122 XPCQ01831 940 aaPredicted RBP12.57□□□□□ -0.4
CHEK1-205ENST00000498122 PMFBP1Q8TBY8 1022 aa12.57□□□□□ -0.4
CHEK1-205ENST00000498122 PHF8Q9UPP1 1060 aa12.57□□□□□ -0.4
CHEK1-205ENST00000498122 SOS2Q07890 1332 aaPredicted RBP12.57□□□□□ -0.4
CHEK1-205ENST00000498122 SBNO2Q9Y2G9 1366 aa12.56□□□□□ -0.4
CHEK1-205ENST00000498122 COL16A1Q07092 1604 aaPredicted RBP12.55□□□□□ -0.4
CHEK1-205ENST00000498122 QRICH2Q9H0J4 1663 aa12.55□□□□□ -0.4
CHEK1-205ENST00000498122 SRPK2P78362 688 aaKnown RBP12.54□□□□□ -0.4
CHEK1-205ENST00000498122 NHSL1Q5SYE7 1610 aa12.54□□□□□ -0.4
CHEK1-205ENST00000498122 PXDNQ92626 1479 aa12.53□□□□□ -0.4
CHEK1-205ENST00000498122 CHRDL2Q6WN34 429 aa12.53□□□□□ -0.4
CHEK1-205ENST00000498122 CCDC61Q9Y6R9 512 aa12.53□□□□□ -0.4
CHEK1-205ENST00000498122 EVC2Q86UK5 1308 aa12.53□□□□□ -0.4
CHEK1-205ENST00000498122 PLEKHG3A1L390 1219 aa12.52□□□□□ -0.41
CHEK1-205ENST00000498122 HSPA5P11021 654 aaKnown RBP12.52□□□□□ -0.41
CHEK1-205ENST00000498122 CABP1Q9NZU7 370 aa12.52□□□□□ -0.41
CHEK1-205ENST00000498122 NPHP3Q7Z494 1330 aa12.52□□□□□ -0.41
CHEK1-205ENST00000498122 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
CHEK1-205ENST00000498122 RGPD8O14715 1765 aaPredicted RBP12.51□□□□□ -0.41
CHEK1-205ENST00000498122 KRT28Q7Z3Y7 464 aa12.51□□□□□ -0.41
CHEK1-205ENST00000498122 LRRC59Q96AG4 307 aaKnown RBP12.5□□□□□ -0.41
CHEK1-205ENST00000498122 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
CHEK1-205ENST00000498122 ACEP12821 1306 aa12.5□□□□□ -0.41
CHEK1-205ENST00000498122 POLR3AO14802 1390 aaPredicted RBP12.5□□□□□ -0.41
CHEK1-205ENST00000498122 PNPLA6Q8IY17 1366 aa12.5□□□□□ -0.41
CHEK1-205ENST00000498122 JCADQ9P266 1359 aa12.5□□□□□ -0.41
CHEK1-205ENST00000498122 PPIP5K1Q6PFW1 1433 aa12.5□□□□□ -0.41
CHEK1-205ENST00000498122 SPATA31A3Q5VYP0 1347 aa12.49□□□□□ -0.41
CHEK1-205ENST00000498122 NGDNQ8NEJ9 315 aaKnown RBP12.49□□□□□ -0.41
CHEK1-205ENST00000498122 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
CHEK1-205ENST00000498122 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
CHEK1-205ENST00000498122 TOPAZ1Q8N9V7 1692 aa12.48□□□□□ -0.41
CHEK1-205ENST00000498122 C11orf95C9JLR9 678 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms