RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 PNPLA6Q8IY17 1366 aa30.01■■■□□ 2.39
LMBR1-219ENST00000498034 LAMC1P11047 1609 aa30■■■□□ 2.39
LMBR1-219ENST00000498034 KNDC1Q76NI1 1749 aa29.99■■■□□ 2.39
LMBR1-219ENST00000498034 CDC42BPGQ6DT37 1551 aa29.99■■■□□ 2.39
LMBR1-219ENST00000498034 ZNF772Q68DY9 489 aaPredicted RBP29.99■■■□□ 2.39
LMBR1-219ENST00000498034 C14orf93Q9H972 538 aaKnown RBP29.99■■■□□ 2.39
LMBR1-219ENST00000498034 PLEKHH1Q9ULM0 1364 aa29.99■■■□□ 2.39
LMBR1-219ENST00000498034 YTHDC2Q9H6S0 1430 aaKnown RBP29.98■■■□□ 2.39
LMBR1-219ENST00000498034 NRXN1Q9ULB1 1477 aa29.98■■■□□ 2.39
LMBR1-219ENST00000498034 CFAP70Q5T0N1 1121 aa29.97■■■□□ 2.39
LMBR1-219ENST00000498034 MYOM2P54296 1465 aa29.97■■■□□ 2.39
LMBR1-219ENST00000498034 SOS2Q07890 1332 aaPredicted RBP29.96■■■□□ 2.39
LMBR1-219ENST00000498034 ESCO1Q5FWF5 840 aa29.96■■■□□ 2.39
LMBR1-219ENST00000498034 NUTM2FA1L443 756 aa29.94■■■□□ 2.38
LMBR1-219ENST00000498034 AFF2P51816 1311 aa29.92■■■□□ 2.38
LMBR1-219ENST00000498034 HRCP23327 699 aa29.91■■■□□ 2.38
LMBR1-219ENST00000498034 DHX57Q6P158 1386 aaKnown RBP29.9■■■□□ 2.38
LMBR1-219ENST00000498034 SIRT1Q96EB6 747 aa29.89■■■□□ 2.38
LMBR1-219ENST00000498034 C8orf37Q96NL8 207 aa29.88■■■□□ 2.37
LMBR1-219ENST00000498034 NPHP3Q7Z494 1330 aa29.87■■■□□ 2.37
LMBR1-219ENST00000498034 FOXO3O43524 673 aa29.86■■■□□ 2.37
LMBR1-219ENST00000498034 ADAMTS2O95450 1211 aa29.86■■■□□ 2.37
LMBR1-219ENST00000498034 FMN2Q9NZ56 1722 aa29.85■■■□□ 2.37
LMBR1-219ENST00000498034 XPCQ01831 940 aaPredicted RBP29.85■■■□□ 2.37
LMBR1-219ENST00000498034 KDM2AQ9Y2K7 1162 aa29.85■■■□□ 2.37
LMBR1-219ENST00000498034 RXRBP28702 533 aa29.84■■■□□ 2.37
LMBR1-219ENST00000498034 PXDNQ92626 1479 aa29.83■■■□□ 2.37
LMBR1-219ENST00000498034 SAFB2Q14151 953 aaKnown RBP eCLIP29.82■■■□□ 2.36
LMBR1-219ENST00000498034 DCAF11Q8TEB1 546 aa29.82■■■□□ 2.36
LMBR1-219ENST00000498034 PRAM1Q96QH2 718 aa29.81■■■□□ 2.36
LMBR1-219ENST00000498034 NGLY1Q96IV0 654 aa29.8■■■□□ 2.36
LMBR1-219ENST00000498034 COL22A1Q8NFW1 1626 aaPredicted RBP29.78■■■□□ 2.36
LMBR1-219ENST00000498034 ADGRB1O14514 1584 aa29.77■■■□□ 2.36
LMBR1-219ENST00000498034 QTRT2Q9H974 415 aaKnown RBP29.77■■■□□ 2.36
LMBR1-219ENST00000498034 POGKQ9P215 609 aa29.76■■■□□ 2.35
LMBR1-219ENST00000498034 DLC1Q96QB1 1528 aa29.76■■■□□ 2.35
LMBR1-219ENST00000498034 RGPD8O14715 1765 aaPredicted RBP29.75■■■□□ 2.35
LMBR1-219ENST00000498034 TRAK1Q9UPV9 953 aa29.75■■■□□ 2.35
LMBR1-219ENST00000498034 KIF1AQ12756 1690 aa29.74■■■□□ 2.35
LMBR1-219ENST00000498034 CDK12Q9NYV4 1490 aaPredicted RBP29.72■■■□□ 2.35
LMBR1-219ENST00000498034 STAC3Q96MF2 364 aa29.71■■■□□ 2.35
LMBR1-219ENST00000498034 PHF8Q9UPP1 1060 aa29.71■■■□□ 2.35
LMBR1-219ENST00000498034 RBM6P78332 1123 aaKnown RBP29.7■■■□□ 2.35
LMBR1-219ENST00000498034 KRT28Q7Z3Y7 464 aa29.7■■■□□ 2.35
LMBR1-219ENST00000498034 USP21Q9UK80 565 aa29.7■■■□□ 2.35
LMBR1-219ENST00000498034 SPATA31A3Q5VYP0 1347 aa29.68■■■□□ 2.34
LMBR1-219ENST00000498034 FNBP4Q8N3X1 1017 aaPredicted RBP29.67■■■□□ 2.34
LMBR1-219ENST00000498034 HIRIP3Q9BW71 556 aaPredicted RBP29.67■■■□□ 2.34
LMBR1-219ENST00000498034 UPF1Q92900 1129 aaKnown RBP eCLIP29.66■■■□□ 2.34
LMBR1-219ENST00000498034 MINK1Q8N4C8 1332 aaPredicted RBP29.65■■■□□ 2.34
LMBR1-219ENST00000498034 ADGRB2O60241 1585 aa29.64■■■□□ 2.34
LMBR1-219ENST00000498034 USP32Q8NFA0 1604 aa29.64■■■□□ 2.34
LMBR1-219ENST00000498034 RGS12O14924 1447 aa29.64■■■□□ 2.34
LMBR1-219ENST00000498034 MARF1Q9Y4F3 1742 aaKnown RBP29.64■■■□□ 2.34
LMBR1-219ENST00000498034 PMFBP1Q8TBY8 1022 aa29.62■■■□□ 2.33
LMBR1-219ENST00000498034 TRPC5Q9UL62 973 aaPredicted RBP29.62■■■□□ 2.33
LMBR1-219ENST00000498034 PSME1Q06323 249 aa29.61■■■□□ 2.33
LMBR1-219ENST00000498034 ANKARQ7Z5J8 1434 aa29.61■■■□□ 2.33
LMBR1-219ENST00000498034 TNS3Q68CZ2 1445 aa29.59■■■□□ 2.33
LMBR1-219ENST00000498034 ATRNO75882 1429 aa29.58■■■□□ 2.33
LMBR1-219ENST00000498034 BCL9LQ86UU0 1499 aa29.57■■■□□ 2.32
LMBR1-219ENST00000498034 PRR36Q9H6K5 1346 aa29.56■■■□□ 2.32
LMBR1-219ENST00000498034 WASLO00401 505 aaPredicted RBP29.56■■■□□ 2.32
LMBR1-219ENST00000498034 ARHGEF28Q8N1W1 1705 aaKnown RBP29.56■■■□□ 2.32
LMBR1-219ENST00000498034 SBNO1A3KN83 1393 aa29.55■■■□□ 2.32
LMBR1-219ENST00000498034 PLEKHG5O94827 1062 aa29.55■■■□□ 2.32
LMBR1-219ENST00000498034 LMOD2Q6P5Q4 547 aa29.54■■■□□ 2.32
LMBR1-219ENST00000498034 CABLES1Q8TDN4 633 aa29.54■■■□□ 2.32
LMBR1-219ENST00000498034 TULP4Q9NRJ4 1543 aa29.53■■■□□ 2.32
LMBR1-219ENST00000498034 EIF3AQ14152 1382 aaKnown RBP29.52■■■□□ 2.32
LMBR1-219ENST00000498034 HAP1P54257 671 aaPredicted RBP29.51■■■□□ 2.31
LMBR1-219ENST00000498034 KIAA1210Q9ULL0 1709 aa29.48■■■□□ 2.31
LMBR1-219ENST00000498034 SLIT2O94813 1529 aa29.48■■■□□ 2.31
LMBR1-219ENST00000498034 ARHGEF10O15013 1369 aa29.48■■■□□ 2.31
LMBR1-219ENST00000498034 NBPF1Q3BBV0 1214 aa29.47■■■□□ 2.31
LMBR1-219ENST00000498034 TRPM3Q9HCF6 1732 aaPredicted RBP29.47■■■□□ 2.31
LMBR1-219ENST00000498034 UNC5CLQ8IV45 518 aa29.46■■■□□ 2.31
LMBR1-219ENST00000498034 GJD4Q96KN9 370 aaPredicted RBP29.46■■■□□ 2.31
LMBR1-219ENST00000498034 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.45■■■□□ 2.31
LMBR1-219ENST00000498034 GPRASP1Q5JY77 1395 aa29.45■■■□□ 2.31
LMBR1-219ENST00000498034 ABCA3Q99758 1704 aa29.45■■■□□ 2.3
LMBR1-219ENST00000498034 NGDNQ8NEJ9 315 aaKnown RBP29.43■■■□□ 2.3
LMBR1-219ENST00000498034 NUDT16Q96DE0 195 aaKnown RBP29.43■■■□□ 2.3
LMBR1-219ENST00000498034 ATP7BP35670 1465 aa29.42■■■□□ 2.3
LMBR1-219ENST00000498034 CDK19Q9BWU1 502 aa29.41■■■□□ 2.3
LMBR1-219ENST00000498034 ALS2Q96Q42 1657 aa29.4■■■□□ 2.3
LMBR1-219ENST00000498034 ATAD2Q6PL18 1390 aa29.4■■■□□ 2.3
LMBR1-219ENST00000498034 SIN3AQ96ST3 1273 aa29.4■■■□□ 2.3
LMBR1-219ENST00000498034 ITSN1Q15811 1721 aa29.39■■■□□ 2.3
LMBR1-219ENST00000498034 GLI3P10071 1580 aa29.39■■■□□ 2.29
LMBR1-219ENST00000498034 RALGAPBQ86X10 1494 aa29.38■■■□□ 2.29
LMBR1-219ENST00000498034 L3MBTL2Q969R5 705 aa29.38■■■□□ 2.29
LMBR1-219ENST00000498034 PLCH1Q4KWH8 1693 aa29.37■■■□□ 2.29
LMBR1-219ENST00000498034 PAK3O75914 559 aaPredicted RBP29.37■■■□□ 2.29
LMBR1-219ENST00000498034 FAM83GA6ND36 823 aa29.36■■■□□ 2.29
LMBR1-219ENST00000498034 NWD2Q9ULI1 1742 aa29.34■■■□□ 2.29
LMBR1-219ENST00000498034 NEUROD1Q13562 356 aa29.33■■■□□ 2.29
LMBR1-219ENST00000498034 VPS72Q15906 364 aa29.33■■■□□ 2.29
LMBR1-219ENST00000498034 CCDC9Q9Y3X0 531 aaKnown RBP29.31■■■□□ 2.28
LMBR1-219ENST00000498034 TOPAZ1Q8N9V7 1692 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms