RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 EXOC6Q8TAG9 804 aa10.3□□□□□ -0.76
HLA-DMB-262ENST00000498020 CDCA7LQ96GN5 454 aa10.3□□□□□ -0.76
HLA-DMB-262ENST00000498020 E9PSI1 815 aa10.29□□□□□ -0.76
HLA-DMB-262ENST00000498020 TCERG1O14776 1098 aaKnown RBP10.29□□□□□ -0.76
HLA-DMB-262ENST00000498020 U2AF1L5P0DN76 240 aaPredicted RBP10.29□□□□□ -0.76
HLA-DMB-262ENST00000498020 U2AF1Q01081 240 aaKnown RBP eCLIP10.29□□□□□ -0.76
HLA-DMB-262ENST00000498020 ZFYVE16Q7Z3T8 1539 aa10.29□□□□□ -0.76
HLA-DMB-262ENST00000498020 LRPPRCP42704 1394 aaKnown RBP10.29□□□□□ -0.76
HLA-DMB-262ENST00000498020 AMER1Q5JTC6 1135 aaPredicted RBP10.29□□□□□ -0.76
HLA-DMB-262ENST00000498020 SLC12A5Q9H2X9 1139 aa10.29□□□□□ -0.76
HLA-DMB-262ENST00000498020 TRPM2O94759 1503 aa10.28□□□□□ -0.76
HLA-DMB-262ENST00000498020 IDI1Q13907 227 aa10.28□□□□□ -0.76
HLA-DMB-262ENST00000498020 PMFBP1Q8TBY8 1022 aa10.28□□□□□ -0.76
HLA-DMB-262ENST00000498020 MAGI2Q86UL8 1455 aa10.27□□□□□ -0.77
HLA-DMB-262ENST00000498020 NEO1Q92859 1461 aa10.26□□□□□ -0.77
HLA-DMB-262ENST00000498020 FBXO31Q5XUX0 539 aaPredicted RBP10.26□□□□□ -0.77
HLA-DMB-262ENST00000498020 NLRP2Q9NX02 1062 aa10.26□□□□□ -0.77
HLA-DMB-262ENST00000498020 FANCIQ9NVI1 1328 aa10.26□□□□□ -0.77
HLA-DMB-262ENST00000498020 PLIN1O60240 522 aa10.26□□□□□ -0.77
HLA-DMB-262ENST00000498020 MS4A1P11836 297 aa10.26□□□□□ -0.77
HLA-DMB-262ENST00000498020 MYH16Q9H6N6 1097 aa10.26□□□□□ -0.77
HLA-DMB-262ENST00000498020 CABP2Q9NPB3 220 aa10.26□□□□□ -0.77
HLA-DMB-262ENST00000498020 FRAT1Q92837 279 aaPredicted RBP10.25□□□□□ -0.77
HLA-DMB-262ENST00000498020 RUNDC1Q96C34 613 aa10.25□□□□□ -0.77
HLA-DMB-262ENST00000498020 BCORL1Q5H9F3 1711 aa10.25□□□□□ -0.77
HLA-DMB-262ENST00000498020 INSRP06213 1382 aa10.25□□□□□ -0.77
HLA-DMB-262ENST00000498020 MLH3Q9UHC1 1453 aa10.25□□□□□ -0.77
HLA-DMB-262ENST00000498020 PRDM15P57071 1507 aaPredicted RBP10.25□□□□□ -0.77
HLA-DMB-262ENST00000498020 NPC1L1Q9UHC9 1359 aa10.25□□□□□ -0.77
HLA-DMB-262ENST00000498020 G3V3G9 751 aa10.25□□□□□ -0.77
HLA-DMB-262ENST00000498020 DCAF8Q5TAQ9 597 aa10.25□□□□□ -0.77
HLA-DMB-262ENST00000498020 CRBNQ96SW2 442 aa10.25□□□□□ -0.77
HLA-DMB-262ENST00000498020 ASXL1Q8IXJ9 1541 aa10.25□□□□□ -0.77
HLA-DMB-262ENST00000498020 PRDM11Q9NQV5 511 aa10.24□□□□□ -0.77
HLA-DMB-262ENST00000498020 ABCA9Q8IUA7 1624 aa10.24□□□□□ -0.77
HLA-DMB-262ENST00000498020 MTHFSP49914 203 aa10.24□□□□□ -0.77
HLA-DMB-262ENST00000498020 TSPOAP1O95153 1857 aa10.24□□□□□ -0.77
HLA-DMB-262ENST00000498020 PUS7Q96PZ0 661 aaKnown RBP10.23□□□□□ -0.77
HLA-DMB-262ENST00000498020 LMTK3Q96Q04 1460 aa10.23□□□□□ -0.77
HLA-DMB-262ENST00000498020 NSD3Q9BZ95 1437 aa10.23□□□□□ -0.77
HLA-DMB-262ENST00000498020 CFAP74Q9C0B2 1584 aa10.23□□□□□ -0.77
HLA-DMB-262ENST00000498020 TRPM1Q7Z4N2 1603 aa10.23□□□□□ -0.77
HLA-DMB-262ENST00000498020 C8orf37Q96NL8 207 aa10.23□□□□□ -0.77
HLA-DMB-262ENST00000498020 PRAM1Q96QH2 718 aa10.23□□□□□ -0.77
HLA-DMB-262ENST00000498020 TET3O43151 1660 aa10.23□□□□□ -0.77
HLA-DMB-262ENST00000498020 FTSJ3Q8IY81 847 aaKnown RBP10.22□□□□□ -0.77
HLA-DMB-262ENST00000498020 NPATQ14207 1427 aa10.22□□□□□ -0.77
HLA-DMB-262ENST00000498020 ATAD2Q6PL18 1390 aa10.22□□□□□ -0.77
HLA-DMB-262ENST00000498020 DDRGK1Q96HY6 314 aa10.22□□□□□ -0.77
HLA-DMB-262ENST00000498020 RTF1Q92541 710 aaKnown RBP10.22□□□□□ -0.77
HLA-DMB-262ENST00000498020 PIK3C2GO75747 1445 aa10.22□□□□□ -0.77
HLA-DMB-262ENST00000498020 MYOM2P54296 1465 aa10.21□□□□□ -0.77
HLA-DMB-262ENST00000498020 NOP58Q9Y2X3 529 aaKnown RBP10.21□□□□□ -0.77
HLA-DMB-262ENST00000498020 RRP7AQ9Y3A4 280 aaKnown RBP10.21□□□□□ -0.77
HLA-DMB-262ENST00000498020 NLRP6P59044 892 aa10.21□□□□□ -0.77
HLA-DMB-262ENST00000498020 CENPQQ7L2Z9 268 aaPredicted RBP10.21□□□□□ -0.78
HLA-DMB-262ENST00000498020 RNF123Q5XPI4 1314 aa10.21□□□□□ -0.78
HLA-DMB-262ENST00000498020 SBNO2Q9Y2G9 1366 aa10.21□□□□□ -0.78
HLA-DMB-262ENST00000498020 FOXO3O43524 673 aa10.2□□□□□ -0.78
HLA-DMB-262ENST00000498020 SLFN5Q08AF3 891 aa10.2□□□□□ -0.78
HLA-DMB-262ENST00000498020 NCKAP5LQ9HCH0 1330 aa10.2□□□□□ -0.78
HLA-DMB-262ENST00000498020 GGNBP2Q9H3C7 697 aa10.2□□□□□ -0.78
HLA-DMB-262ENST00000498020 TCP11L2Q8N4U5 519 aa10.2□□□□□ -0.78
HLA-DMB-262ENST00000498020 RGS3P49796 1198 aa10.19□□□□□ -0.78
HLA-DMB-262ENST00000498020 ZC3H6P61129 1189 aaKnown RBP10.19□□□□□ -0.78
HLA-DMB-262ENST00000498020 ABTB2Q8N961 1025 aa10.19□□□□□ -0.78
HLA-DMB-262ENST00000498020 CALD1Q05682 793 aaKnown RBP10.19□□□□□ -0.78
HLA-DMB-262ENST00000498020 DIAPH1O60610 1272 aaKnown RBP10.18□□□□□ -0.78
HLA-DMB-262ENST00000498020 NSD2O96028 1365 aa10.18□□□□□ -0.78
HLA-DMB-262ENST00000498020 NINLQ9Y2I6 1382 aa10.18□□□□□ -0.78
HLA-DMB-262ENST00000498020 CARD14Q9BXL6 1004 aa10.18□□□□□ -0.78
HLA-DMB-262ENST00000498020 POLR1AO95602 1720 aaPredicted RBP10.18□□□□□ -0.78
HLA-DMB-262ENST00000498020 EFCAB6Q5THR3 1501 aa10.18□□□□□ -0.78
HLA-DMB-262ENST00000498020 LAMC1P11047 1609 aa10.18□□□□□ -0.78
HLA-DMB-262ENST00000498020 CDK19Q9BWU1 502 aa10.18□□□□□ -0.78
HLA-DMB-262ENST00000498020 DUSP27Q5VZP5 1158 aa10.17□□□□□ -0.78
HLA-DMB-262ENST00000498020 TOM1L2Q6ZVM7 507 aa10.17□□□□□ -0.78
HLA-DMB-262ENST00000498020 INO80Q9ULG1 1556 aaPredicted RBP10.17□□□□□ -0.78
HLA-DMB-262ENST00000498020 CLTCL1P53675 1640 aa10.17□□□□□ -0.78
HLA-DMB-262ENST00000498020 PDE4AP27815 886 aa10.17□□□□□ -0.78
HLA-DMB-262ENST00000498020 WDR63Q8IWG1 891 aa10.17□□□□□ -0.78
HLA-DMB-262ENST00000498020 CHMP4BQ9H444 224 aaKnown RBP10.17□□□□□ -0.78
HLA-DMB-262ENST00000498020 DIP2BQ9P265 1576 aa10.17□□□□□ -0.78
HLA-DMB-262ENST00000498020 IPO8O15397 1037 aaKnown RBP10.16□□□□□ -0.78
HLA-DMB-262ENST00000498020 DDX54Q8TDD1 881 aaKnown RBP10.16□□□□□ -0.78
HLA-DMB-262ENST00000498020 POLR3AO14802 1390 aaPredicted RBP10.16□□□□□ -0.78
HLA-DMB-262ENST00000498020 BLMP54132 1417 aaPredicted RBP10.16□□□□□ -0.78
HLA-DMB-262ENST00000498020 E9PCH4 1651 aa10.16□□□□□ -0.78
HLA-DMB-262ENST00000498020 HECW2Q9P2P5 1572 aa10.16□□□□□ -0.78
HLA-DMB-262ENST00000498020 UGGT1Q9NYU2 1555 aa10.16□□□□□ -0.78
HLA-DMB-262ENST00000498020 IPO9Q96P70 1041 aaKnown RBP10.16□□□□□ -0.78
HLA-DMB-262ENST00000498020 LMTK2Q8IWU2 1503 aa10.15□□□□□ -0.78
HLA-DMB-262ENST00000498020 ANKRD36BQ8N2N9 1353 aa10.15□□□□□ -0.78
HLA-DMB-262ENST00000498020 SPHKAPQ2M3C7 1700 aa10.15□□□□□ -0.78
HLA-DMB-262ENST00000498020 WWC1Q8IX03 1113 aa10.15□□□□□ -0.78
HLA-DMB-262ENST00000498020 COG3Q96JB2 828 aa10.15□□□□□ -0.78
HLA-DMB-262ENST00000498020 CABP1Q9NZU7 370 aa10.15□□□□□ -0.78
HLA-DMB-262ENST00000498020 RAPGEF4Q8WZA2 1011 aa10.15□□□□□ -0.78
HLA-DMB-262ENST00000498020 AAMPQ13685 434 aa10.15□□□□□ -0.79
HLA-DMB-262ENST00000498020 PDE3AQ14432 1141 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms