RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 DDX17Q92841 729 aaKnown RBP17.41■□□□□ 0.38
NUDCD3-211ENST00000497978 IFT172Q9UG01 1749 aa17.39■□□□□ 0.37
NUDCD3-211ENST00000497978 STK26Q9P289 416 aa17.39■□□□□ 0.37
NUDCD3-211ENST00000497978 ORAI2Q96SN7 254 aa17.38■□□□□ 0.37
NUDCD3-211ENST00000497978 LRPPRCP42704 1394 aaKnown RBP17.37■□□□□ 0.37
NUDCD3-211ENST00000497978 PNPLA6Q8IY17 1366 aa17.37■□□□□ 0.37
NUDCD3-211ENST00000497978 PIK3C2GO75747 1445 aa17.37■□□□□ 0.37
NUDCD3-211ENST00000497978 RAB3GAP2Q9H2M9 1393 aa17.36■□□□□ 0.37
NUDCD3-211ENST00000497978 TMEM132EQ6IEE7 984 aa17.35■□□□□ 0.37
NUDCD3-211ENST00000497978 ABCC11Q96J66 1382 aa17.35■□□□□ 0.37
NUDCD3-211ENST00000497978 TECPR2O15040 1411 aa17.35■□□□□ 0.37
NUDCD3-211ENST00000497978 CDC42BPGQ6DT37 1551 aa17.35■□□□□ 0.37
NUDCD3-211ENST00000497978 LAMC1P11047 1609 aa17.35■□□□□ 0.37
NUDCD3-211ENST00000497978 RXRBP28702 533 aa17.34■□□□□ 0.37
NUDCD3-211ENST00000497978 AFF2P51816 1311 aa17.34■□□□□ 0.37
NUDCD3-211ENST00000497978 SOS2Q07890 1332 aaPredicted RBP17.34■□□□□ 0.37
NUDCD3-211ENST00000497978 ESCO1Q5FWF5 840 aa17.34■□□□□ 0.37
NUDCD3-211ENST00000497978 WAPLQ7Z5K2 1190 aa17.34■□□□□ 0.37
NUDCD3-211ENST00000497978 C8orf37Q96NL8 207 aa17.33■□□□□ 0.36
NUDCD3-211ENST00000497978 KNDC1Q76NI1 1749 aa17.33■□□□□ 0.36
NUDCD3-211ENST00000497978 YTHDC2Q9H6S0 1430 aaKnown RBP17.32■□□□□ 0.36
NUDCD3-211ENST00000497978 NPHP3Q7Z494 1330 aa17.32■□□□□ 0.36
NUDCD3-211ENST00000497978 C14orf93Q9H972 538 aaKnown RBP17.31■□□□□ 0.36
NUDCD3-211ENST00000497978 MYOM2P54296 1465 aa17.31■□□□□ 0.36
NUDCD3-211ENST00000497978 ADAMTS2O95450 1211 aa17.3■□□□□ 0.36
NUDCD3-211ENST00000497978 SIRT1Q96EB6 747 aa17.3■□□□□ 0.36
NUDCD3-211ENST00000497978 DHX57Q6P158 1386 aaKnown RBP17.29■□□□□ 0.36
NUDCD3-211ENST00000497978 HOXD11P31277 338 aaPredicted RBP17.29■□□□□ 0.36
NUDCD3-211ENST00000497978 NGLY1Q96IV0 654 aa17.29■□□□□ 0.36
NUDCD3-211ENST00000497978 NRXN1Q9ULB1 1477 aa17.29■□□□□ 0.36
NUDCD3-211ENST00000497978 PLEKHH1Q9ULM0 1364 aa17.28■□□□□ 0.36
NUDCD3-211ENST00000497978 NUTM2FA1L443 756 aa17.28■□□□□ 0.36
NUDCD3-211ENST00000497978 CFAP70Q5T0N1 1121 aa17.28■□□□□ 0.36
NUDCD3-211ENST00000497978 CDK12Q9NYV4 1490 aaPredicted RBP17.27■□□□□ 0.36
NUDCD3-211ENST00000497978 FOXO3O43524 673 aa17.27■□□□□ 0.36
NUDCD3-211ENST00000497978 QTRT2Q9H974 415 aaKnown RBP17.27■□□□□ 0.36
NUDCD3-211ENST00000497978 HRCP23327 699 aa17.26■□□□□ 0.35
NUDCD3-211ENST00000497978 RBM6P78332 1123 aaKnown RBP17.25■□□□□ 0.35
NUDCD3-211ENST00000497978 COL22A1Q8NFW1 1626 aaPredicted RBP17.25■□□□□ 0.35
NUDCD3-211ENST00000497978 PXDNQ92626 1479 aa17.24■□□□□ 0.35
NUDCD3-211ENST00000497978 FMN2Q9NZ56 1722 aa17.24■□□□□ 0.35
NUDCD3-211ENST00000497978 XPCQ01831 940 aaPredicted RBP17.24■□□□□ 0.35
NUDCD3-211ENST00000497978 POGKQ9P215 609 aa17.23■□□□□ 0.35
NUDCD3-211ENST00000497978 STAC3Q96MF2 364 aa17.22■□□□□ 0.35
NUDCD3-211ENST00000497978 PRAM1Q96QH2 718 aa17.22■□□□□ 0.35
NUDCD3-211ENST00000497978 USP21Q9UK80 565 aa17.22■□□□□ 0.35
NUDCD3-211ENST00000497978 KIF1AQ12756 1690 aa17.22■□□□□ 0.35
NUDCD3-211ENST00000497978 SAFB2Q14151 953 aaKnown RBP eCLIP17.21■□□□□ 0.35
NUDCD3-211ENST00000497978 DCAF11Q8TEB1 546 aa17.21■□□□□ 0.35
NUDCD3-211ENST00000497978 UPF1Q92900 1129 aaKnown RBP eCLIP17.21■□□□□ 0.35
NUDCD3-211ENST00000497978 KDM2AQ9Y2K7 1162 aa17.21■□□□□ 0.35
NUDCD3-211ENST00000497978 TRPC5Q9UL62 973 aaPredicted RBP17.2■□□□□ 0.34
NUDCD3-211ENST00000497978 DLC1Q96QB1 1528 aa17.2■□□□□ 0.34
NUDCD3-211ENST00000497978 KRT28Q7Z3Y7 464 aa17.19■□□□□ 0.34
NUDCD3-211ENST00000497978 FNBP4Q8N3X1 1017 aaPredicted RBP17.19■□□□□ 0.34
NUDCD3-211ENST00000497978 PHF8Q9UPP1 1060 aa17.19■□□□□ 0.34
NUDCD3-211ENST00000497978 PSME1Q06323 249 aa17.18■□□□□ 0.34
NUDCD3-211ENST00000497978 RGS12O14924 1447 aa17.17■□□□□ 0.34
NUDCD3-211ENST00000497978 TRAK1Q9UPV9 953 aa17.17■□□□□ 0.34
NUDCD3-211ENST00000497978 SPATA31A3Q5VYP0 1347 aa17.17■□□□□ 0.34
NUDCD3-211ENST00000497978 RGPD8O14715 1765 aaPredicted RBP17.16■□□□□ 0.34
NUDCD3-211ENST00000497978 ADGRB1O14514 1584 aa17.15■□□□□ 0.34
NUDCD3-211ENST00000497978 MARF1Q9Y4F3 1742 aaKnown RBP17.15■□□□□ 0.34
NUDCD3-211ENST00000497978 ANKARQ7Z5J8 1434 aa17.14■□□□□ 0.33
NUDCD3-211ENST00000497978 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
NUDCD3-211ENST00000497978 EIF3AQ14152 1382 aaKnown RBP17.14■□□□□ 0.33
NUDCD3-211ENST00000497978 ATRNO75882 1429 aa17.13■□□□□ 0.33
NUDCD3-211ENST00000497978 TNS3Q68CZ2 1445 aa17.13■□□□□ 0.33
NUDCD3-211ENST00000497978 ADGRB2O60241 1585 aa17.12■□□□□ 0.33
NUDCD3-211ENST00000497978 HIRIP3Q9BW71 556 aaPredicted RBP17.12■□□□□ 0.33
NUDCD3-211ENST00000497978 MINK1Q8N4C8 1332 aaPredicted RBP17.12■□□□□ 0.33
NUDCD3-211ENST00000497978 SBNO1A3KN83 1393 aa17.12■□□□□ 0.33
NUDCD3-211ENST00000497978 LMOD2Q6P5Q4 547 aa17.11■□□□□ 0.33
NUDCD3-211ENST00000497978 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
NUDCD3-211ENST00000497978 BCL9LQ86UU0 1499 aa17.11■□□□□ 0.33
NUDCD3-211ENST00000497978 ARHGEF10O15013 1369 aa17.1■□□□□ 0.33
NUDCD3-211ENST00000497978 UNC5CLQ8IV45 518 aa17.09■□□□□ 0.33
NUDCD3-211ENST00000497978 ATAD2Q6PL18 1390 aa17.09■□□□□ 0.33
NUDCD3-211ENST00000497978 USP32Q8NFA0 1604 aa17.08■□□□□ 0.32
NUDCD3-211ENST00000497978 GPRASP1Q5JY77 1395 aa17.08■□□□□ 0.32
NUDCD3-211ENST00000497978 WASLO00401 505 aaPredicted RBP17.08■□□□□ 0.32
NUDCD3-211ENST00000497978 GJD4Q96KN9 370 aaPredicted RBP17.08■□□□□ 0.32
NUDCD3-211ENST00000497978 PLEKHG5O94827 1062 aa17.07■□□□□ 0.32
NUDCD3-211ENST00000497978 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.07■□□□□ 0.32
NUDCD3-211ENST00000497978 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
NUDCD3-211ENST00000497978 CABLES1Q8TDN4 633 aa17.06■□□□□ 0.32
NUDCD3-211ENST00000497978 SLIT2O94813 1529 aa17.06■□□□□ 0.32
NUDCD3-211ENST00000497978 PRR36Q9H6K5 1346 aa17.04■□□□□ 0.32
NUDCD3-211ENST00000497978 NGDNQ8NEJ9 315 aaKnown RBP17.04■□□□□ 0.32
NUDCD3-211ENST00000497978 ARHGEF28Q8N1W1 1705 aaKnown RBP17.04■□□□□ 0.32
NUDCD3-211ENST00000497978 RALGAPBQ86X10 1494 aa17.02■□□□□ 0.32
NUDCD3-211ENST00000497978 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
NUDCD3-211ENST00000497978 ABCA3Q99758 1704 aa17.01■□□□□ 0.31
NUDCD3-211ENST00000497978 TRPM3Q9HCF6 1732 aaPredicted RBP17.01■□□□□ 0.31
NUDCD3-211ENST00000497978 PAK3O75914 559 aaPredicted RBP17■□□□□ 0.31
NUDCD3-211ENST00000497978 ITSN1Q15811 1721 aa17■□□□□ 0.31
NUDCD3-211ENST00000497978 VPS72Q15906 364 aa17■□□□□ 0.31
NUDCD3-211ENST00000497978 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
NUDCD3-211ENST00000497978 CCDC9Q9Y3X0 531 aaKnown RBP17■□□□□ 0.31
NUDCD3-211ENST00000497978 NWD2Q9ULI1 1742 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms