RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 ADGRB2O60241 1585 aa16.65■□□□□ 0.26
HPS1-213ENST00000497527 PANK3Q9H999 370 aa16.65■□□□□ 0.26
HPS1-213ENST00000497527 NPHP4O75161 1426 aaPredicted RBP16.64■□□□□ 0.25
HPS1-213ENST00000497527 RALBP1Q15311 655 aa16.64■□□□□ 0.25
HPS1-213ENST00000497527 SLC26A8Q96RN1 970 aa16.64■□□□□ 0.25
HPS1-213ENST00000497527 SAFB2Q14151 953 aaKnown RBP eCLIP16.63■□□□□ 0.25
HPS1-213ENST00000497527 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
HPS1-213ENST00000497527 MINK1Q8N4C8 1332 aaPredicted RBP16.63■□□□□ 0.25
HPS1-213ENST00000497527 PER1O15534 1290 aaPredicted RBP16.62■□□□□ 0.25
HPS1-213ENST00000497527 SRPK2P78362 688 aaKnown RBP16.62■□□□□ 0.25
HPS1-213ENST00000497527 KNSTRNQ9Y448 316 aa16.62■□□□□ 0.25
HPS1-213ENST00000497527 USP32Q8NFA0 1604 aa16.62■□□□□ 0.25
HPS1-213ENST00000497527 NPC1L1Q9UHC9 1359 aa16.62■□□□□ 0.25
HPS1-213ENST00000497527 PTPRUQ92729 1446 aa16.61■□□□□ 0.25
HPS1-213ENST00000497527 AMOTL2Q9Y2J4 779 aa16.6■□□□□ 0.25
HPS1-213ENST00000497527 ROBO2Q9HCK4 1378 aa16.6■□□□□ 0.25
HPS1-213ENST00000497527 PLEKHH1Q9ULM0 1364 aa16.6■□□□□ 0.25
HPS1-213ENST00000497527 KDM4FA0A1W2PPD8 638 aa16.59■□□□□ 0.25
HPS1-213ENST00000497527 WAPLQ7Z5K2 1190 aa16.59■□□□□ 0.25
HPS1-213ENST00000497527 TMC1Q8TDI8 760 aa16.58■□□□□ 0.24
HPS1-213ENST00000497527 CDK19Q9BWU1 502 aa16.58■□□□□ 0.24
HPS1-213ENST00000497527 ANKRD36BQ8N2N9 1353 aa16.58■□□□□ 0.24
HPS1-213ENST00000497527 PARD3Q8TEW0 1356 aa16.58■□□□□ 0.24
HPS1-213ENST00000497527 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.58■□□□□ 0.24
HPS1-213ENST00000497527 ITSN1Q15811 1721 aa16.57■□□□□ 0.24
HPS1-213ENST00000497527 WASLO00401 505 aaPredicted RBP16.57■□□□□ 0.24
HPS1-213ENST00000497527 CABP2Q9NPB3 220 aa16.57■□□□□ 0.24
HPS1-213ENST00000497527 NWD1Q149M9 1564 aa16.56■□□□□ 0.24
HPS1-213ENST00000497527 MYBBP1AQ9BQG0 1328 aaKnown RBP16.56■□□□□ 0.24
HPS1-213ENST00000497527 ATP7BP35670 1465 aa16.55■□□□□ 0.24
HPS1-213ENST00000497527 TERF2IPQ9NYB0 399 aa16.55■□□□□ 0.24
HPS1-213ENST00000497527 BRD4O60885 1362 aaPredicted RBP16.53■□□□□ 0.24
HPS1-213ENST00000497527 NSD2O96028 1365 aa16.53■□□□□ 0.24
HPS1-213ENST00000497527 CENPBP07199 599 aaPredicted RBP16.53■□□□□ 0.24
HPS1-213ENST00000497527 SLC12A5Q9H2X9 1139 aa16.53■□□□□ 0.24
HPS1-213ENST00000497527 HDGFL2Q7Z4V5 671 aaPredicted RBP16.52■□□□□ 0.24
HPS1-213ENST00000497527 MRS2Q9HD23 443 aa16.52■□□□□ 0.24
HPS1-213ENST00000497527 ANKRD26Q9UPS8 1709 aa16.52■□□□□ 0.24
HPS1-213ENST00000497527 LMTK3Q96Q04 1460 aa16.52■□□□□ 0.23
HPS1-213ENST00000497527 TOPAZ1Q8N9V7 1692 aa16.52■□□□□ 0.23
HPS1-213ENST00000497527 NSD3Q9BZ95 1437 aa16.52■□□□□ 0.23
HPS1-213ENST00000497527 AKAP12Q02952 1782 aa16.51■□□□□ 0.23
HPS1-213ENST00000497527 NCKAP5LQ9HCH0 1330 aa16.51■□□□□ 0.23
HPS1-213ENST00000497527 NKTRP30414 1462 aaKnown RBP16.51■□□□□ 0.23
HPS1-213ENST00000497527 AMER1Q5JTC6 1135 aaPredicted RBP16.51■□□□□ 0.23
HPS1-213ENST00000497527 CC2D1BQ5T0F9 858 aaKnown RBP16.51■□□□□ 0.23
HPS1-213ENST00000497527 NLRP13Q86W25 1043 aa16.51■□□□□ 0.23
HPS1-213ENST00000497527 KIF20BQ96Q89 1820 aa16.51■□□□□ 0.23
HPS1-213ENST00000497527 FMN2Q9NZ56 1722 aa16.5■□□□□ 0.23
HPS1-213ENST00000497527 CGNL1Q0VF96 1302 aa16.5■□□□□ 0.23
HPS1-213ENST00000497527 KCNA6P17658 529 aa16.5■□□□□ 0.23
HPS1-213ENST00000497527 CDC42BPGQ6DT37 1551 aa16.5■□□□□ 0.23
HPS1-213ENST00000497527 PPIP5K1Q6PFW1 1433 aa16.49■□□□□ 0.23
HPS1-213ENST00000497527 MON2Q7Z3U7 1717 aa16.49■□□□□ 0.23
HPS1-213ENST00000497527 NALCNQ8IZF0 1738 aa16.49■□□□□ 0.23
HPS1-213ENST00000497527 CCDC61Q9Y6R9 512 aa16.49■□□□□ 0.23
HPS1-213ENST00000497527 A0A1W2PP64 1363 aa16.49■□□□□ 0.23
HPS1-213ENST00000497527 NUDT16Q96DE0 195 aaKnown RBP16.48■□□□□ 0.23
HPS1-213ENST00000497527 YTHDC1Q96MU7 727 aaKnown RBP16.48■□□□□ 0.23
HPS1-213ENST00000497527 ANKARQ7Z5J8 1434 aa16.47■□□□□ 0.23
HPS1-213ENST00000497527 CNGB1Q14028 1251 aaPredicted RBP16.47■□□□□ 0.23
HPS1-213ENST00000497527 CARD14Q9BXL6 1004 aa16.47■□□□□ 0.23
HPS1-213ENST00000497527 CD163L1Q9NR16 1453 aa16.47■□□□□ 0.23
HPS1-213ENST00000497527 STRCQ7RTU9 1775 aa16.46■□□□□ 0.23
HPS1-213ENST00000497527 CABP1Q9NZU7 370 aa16.46■□□□□ 0.23
HPS1-213ENST00000497527 ADGRL3Q9HAR2 1447 aa16.45■□□□□ 0.22
HPS1-213ENST00000497527 RGPD8O14715 1765 aaPredicted RBP16.44■□□□□ 0.22
HPS1-213ENST00000497527 ZNF692Q9BU19 519 aaPredicted RBP16.44■□□□□ 0.22
HPS1-213ENST00000497527 CPSF1Q10570 1443 aaKnown RBP16.44■□□□□ 0.22
HPS1-213ENST00000497527 HSPA2P54652 639 aa16.43■□□□□ 0.22
HPS1-213ENST00000497527 EDC4Q6P2E9 1401 aaKnown RBP16.43■□□□□ 0.22
HPS1-213ENST00000497527 NCOA3Q9Y6Q9 1424 aa16.42■□□□□ 0.22
HPS1-213ENST00000497527 PLEKHG3A1L390 1219 aa16.41■□□□□ 0.22
HPS1-213ENST00000497527 PPP2R1AP30153 589 aa16.41■□□□□ 0.22
HPS1-213ENST00000497527 MORC1Q86VD1 984 aa16.41■□□□□ 0.22
HPS1-213ENST00000497527 PRR36Q9H6K5 1346 aa16.41■□□□□ 0.22
HPS1-213ENST00000497527 CCDC184Q52MB2 194 aa16.4■□□□□ 0.22
HPS1-213ENST00000497527 NRKQ7Z2Y5 1582 aa16.39■□□□□ 0.21
HPS1-213ENST00000497527 C14orf37Q86TY3 774 aa16.39■□□□□ 0.21
HPS1-213ENST00000497527 STRCP1A6NGW2 1772 aa16.38■□□□□ 0.21
HPS1-213ENST00000497527 PROSER2Q86WR7 435 aaPredicted RBP16.38■□□□□ 0.21
HPS1-213ENST00000497527 FAM9BQ8IZU0 186 aa16.38■□□□□ 0.21
HPS1-213ENST00000497527 INSRP06213 1382 aa16.38■□□□□ 0.21
HPS1-213ENST00000497527 PNISRQ8TF01 805 aaKnown RBP16.37■□□□□ 0.21
HPS1-213ENST00000497527 DMRT2Q9Y5R5 561 aa16.37■□□□□ 0.21
HPS1-213ENST00000497527 POLR3AO14802 1390 aaPredicted RBP16.36■□□□□ 0.21
HPS1-213ENST00000497527 DCCP43146 1447 aa16.36■□□□□ 0.21
HPS1-213ENST00000497527 ACEP12821 1306 aa16.35■□□□□ 0.21
HPS1-213ENST00000497527 USP6P35125 1406 aa16.35■□□□□ 0.21
HPS1-213ENST00000497527 KIF1AQ12756 1690 aa16.34■□□□□ 0.21
HPS1-213ENST00000497527 FYB1O15117 783 aa16.34■□□□□ 0.21
HPS1-213ENST00000497527 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
HPS1-213ENST00000497527 NGDNQ8NEJ9 315 aaKnown RBP16.33■□□□□ 0.2
HPS1-213ENST00000497527 CFAP53Q96M91 514 aa16.33■□□□□ 0.2
HPS1-213ENST00000497527 TTC21AQ8NDW8 1320 aa16.33■□□□□ 0.2
HPS1-213ENST00000497527 NUTM2FA1L443 756 aa16.32■□□□□ 0.2
HPS1-213ENST00000497527 C19orf44Q9H6X5 657 aa16.32■□□□□ 0.2
HPS1-213ENST00000497527 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
HPS1-213ENST00000497527 TMEM94Q12767 1356 aa16.31■□□□□ 0.2
HPS1-213ENST00000497527 HNRNPUQ00839 825 aaKnown RBP eCLIP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms