RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 GDF9O60383 454 aa9.21□□□□□ -0.94
CBX3-208ENST00000497498 HLA-CQ95604 372 aa9.21□□□□□ -0.94
CBX3-208ENST00000497498 SSTR3P32745 418 aaPredicted RBP9.2□□□□□ -0.94
CBX3-208ENST00000497498 MMP16P51512 607 aa9.2□□□□□ -0.94
CBX3-208ENST00000497498 USB1Q9BQ65 265 aaKnown RBP9.2□□□□□ -0.94
CBX3-208ENST00000497498 NUTM1Q86Y26 1132 aa9.18□□□□□ -0.94
CBX3-208ENST00000497498 DXOO77932 396 aaKnown RBP9.17□□□□□ -0.94
CBX3-208ENST00000497498 CD2BP2O95400 341 aaKnown RBP9.17□□□□□ -0.94
CBX3-208ENST00000497498 GUCA2AQ02747 115 aa9.17□□□□□ -0.94
CBX3-208ENST00000497498 PKD2L1Q9P0L9 805 aa9.17□□□□□ -0.94
CBX3-208ENST00000497498 TTLL12Q14166 644 aaPredicted RBP9.16□□□□□ -0.94
CBX3-208ENST00000497498 TNFRSF10AO00220 468 aa9.15□□□□□ -0.94
CBX3-208ENST00000497498 DGAT1O75907 488 aa9.15□□□□□ -0.94
CBX3-208ENST00000497498 GIGYF2Q6Y7W6 1299 aaKnown RBP9.15□□□□□ -0.94
CBX3-208ENST00000497498 TRIM66O15016 1216 aa9.14□□□□□ -0.95
CBX3-208ENST00000497498 SPIRE2Q8WWL2 714 aa9.14□□□□□ -0.95
CBX3-208ENST00000497498 PKDCCQ504Y2 493 aa9.13□□□□□ -0.95
CBX3-208ENST00000497498 AK7Q96M32 723 aa9.13□□□□□ -0.95
CBX3-208ENST00000497498 PCDHGC3Q9UN70 934 aa9.13□□□□□ -0.95
CBX3-208ENST00000497498 ZBTB24O43167 697 aaPredicted RBP9.12□□□□□ -0.95
CBX3-208ENST00000497498 FDX1P10109 184 aa9.12□□□□□ -0.95
CBX3-208ENST00000497498 RETREG3Q86VR2 466 aa9.12□□□□□ -0.95
CBX3-208ENST00000497498 PARP9Q8IXQ6 854 aa9.12□□□□□ -0.95
CBX3-208ENST00000497498 SYMPKQ92797 1274 aaKnown RBP9.12□□□□□ -0.95
CBX3-208ENST00000497498 MYT1Q01538 1121 aa9.11□□□□□ -0.95
CBX3-208ENST00000497498 FOXC1Q12948 553 aa9.11□□□□□ -0.95
CBX3-208ENST00000497498 BEGAINQ9BUH8 593 aa9.1□□□□□ -0.95
CBX3-208ENST00000497498 FAM187AA6NFU0 413 aa9.09□□□□□ -0.95
CBX3-208ENST00000497498 MOXD2PA6NHM9 499 aa9.09□□□□□ -0.95
CBX3-208ENST00000497498 JUNDP17535 347 aa9.09□□□□□ -0.95
CBX3-208ENST00000497498 TRIM32Q13049 653 aa9.09□□□□□ -0.95
CBX3-208ENST00000497498 TOR4AQ9NXH8 423 aa9.09□□□□□ -0.95
CBX3-208ENST00000497498 NDUFV2P19404 249 aa9.08□□□□□ -0.96
CBX3-208ENST00000497498 MS4A1P11836 297 aa9.07□□□□□ -0.96
CBX3-208ENST00000497498 GJA5P36382 358 aa9.07□□□□□ -0.96
CBX3-208ENST00000497498 C6orf229H3BNL8 230 aa9.06□□□□□ -0.96
CBX3-208ENST00000497498 WNT7AO00755 349 aa9.06□□□□□ -0.96
CBX3-208ENST00000497498 CCDC24Q8N4L8 307 aa9.06□□□□□ -0.96
CBX3-208ENST00000497498 TBC1D2Q9BYX2 928 aa9.06□□□□□ -0.96
CBX3-208ENST00000497498 DIXDC1Q155Q3 683 aa9.05□□□□□ -0.96
CBX3-208ENST00000497498 CYP4X1Q8N118 509 aa9.05□□□□□ -0.96
CBX3-208ENST00000497498 PDE4DQ08499 809 aa9.04□□□□□ -0.96
CBX3-208ENST00000497498 NUDT12Q9BQG2 462 aa9.04□□□□□ -0.96
CBX3-208ENST00000497498 SPDYE5A6NIY4 337 aa9.03□□□□□ -0.96
CBX3-208ENST00000497498 AVPP01185 164 aa9.03□□□□□ -0.96
CBX3-208ENST00000497498 ZNF787Q6DD87 383 aa9.03□□□□□ -0.96
CBX3-208ENST00000497498 RSBN1LQ6PCB5 846 aaPredicted RBP9.03□□□□□ -0.96
CBX3-208ENST00000497498 SLC24A3Q9HC58 644 aa9.03□□□□□ -0.96
CBX3-208ENST00000497498 WNT7BP56706 349 aa9.02□□□□□ -0.97
CBX3-208ENST00000497498 SKOR1P84550 965 aa9.02□□□□□ -0.97
CBX3-208ENST00000497498 MTMR2Q13614 643 aa9.02□□□□□ -0.97
CBX3-208ENST00000497498 CRIPAKQ8N1N5 446 aa9.02□□□□□ -0.97
CBX3-208ENST00000497498 AAASQ9NRG9 546 aa9.02□□□□□ -0.97
CBX3-208ENST00000497498 SPTLC1O15269 473 aa9.01□□□□□ -0.97
CBX3-208ENST00000497498 DESI1Q6ICB0 168 aa9.01□□□□□ -0.97
CBX3-208ENST00000497498 PTCRAQ6ISU1 281 aaPredicted RBP9.01□□□□□ -0.97
CBX3-208ENST00000497498 SNIP1Q8TAD8 396 aaKnown RBP9.01□□□□□ -0.97
CBX3-208ENST00000497498 MRGPRX2Q96LB1 330 aa9.01□□□□□ -0.97
CBX3-208ENST00000497498 TTC24A2A3L6 582 aaPredicted RBP9□□□□□ -0.97
CBX3-208ENST00000497498 CCNYL3P0C7X3 344 aa9□□□□□ -0.97
CBX3-208ENST00000497498 PTPRNQ16849 979 aa9□□□□□ -0.97
CBX3-208ENST00000497498 RC3H1Q5TC82 1133 aaKnown RBP9□□□□□ -0.97
CBX3-208ENST00000497498 PRR7Q8TB68 274 aa9□□□□□ -0.97
CBX3-208ENST00000497498 PCDHB15Q9Y5E8 787 aa9□□□□□ -0.97
CBX3-208ENST00000497498 ST8SIA5O15466 376 aa8.99□□□□□ -0.97
CBX3-208ENST00000497498 EVA1BQ9NVM1 165 aa8.99□□□□□ -0.97
CBX3-208ENST00000497498 SMPD1P17405 629 aa8.98□□□□□ -0.97
CBX3-208ENST00000497498 CTC1Q2NKJ3 1217 aa8.98□□□□□ -0.97
CBX3-208ENST00000497498 RIC3Q7Z5B4 369 aa8.98□□□□□ -0.97
CBX3-208ENST00000497498 SMCPP49901 116 aaPredicted RBP8.97□□□□□ -0.97
CBX3-208ENST00000497498 PRPF38BQ5VTL8 546 aaKnown RBP8.97□□□□□ -0.97
CBX3-208ENST00000497498 POTECB2RU33 542 aa8.96□□□□□ -0.98
CBX3-208ENST00000497498 HRCP23327 699 aa8.96□□□□□ -0.98
CBX3-208ENST00000497498 ZBTB3Q9H5J0 574 aa8.96□□□□□ -0.98
CBX3-208ENST00000497498 J3QL48 77 aa8.95□□□□□ -0.98
CBX3-208ENST00000497498 KCNH2Q12809 1159 aa8.95□□□□□ -0.98
CBX3-208ENST00000497498 TUSC1Q2TAM9 212 aa8.95□□□□□ -0.98
CBX3-208ENST00000497498 MYSM1Q5VVJ2 828 aa8.95□□□□□ -0.98
CBX3-208ENST00000497498 LYPD8Q6UX82 237 aa8.95□□□□□ -0.98
CBX3-208ENST00000497498 BCANQ96GW7 911 aa8.95□□□□□ -0.98
CBX3-208ENST00000497498 CFAP99D6REC4 459 aa8.94□□□□□ -0.98
CBX3-208ENST00000497498 AXIN1O15169 862 aa8.94□□□□□ -0.98
CBX3-208ENST00000497498 UNC93B1Q9H1C4 597 aa8.94□□□□□ -0.98
CBX3-208ENST00000497498 SIAH2O43255 324 aa8.93□□□□□ -0.98
CBX3-208ENST00000497498 SLC24A1O60721 1099 aa8.93□□□□□ -0.98
CBX3-208ENST00000497498 SH3BP2P78314 561 aa8.93□□□□□ -0.98
CBX3-208ENST00000497498 LIMD1Q9UGP4 676 aa8.93□□□□□ -0.98
CBX3-208ENST00000497498 DACH1Q9UI36 760 aa8.93□□□□□ -0.98
CBX3-208ENST00000497498 CABLES1Q8TDN4 633 aa8.92□□□□□ -0.98
CBX3-208ENST00000497498 EHBP1Q8NDI1 1231 aa8.91□□□□□ -0.98
CBX3-208ENST00000497498 ZNF775Q96BV0 537 aaPredicted RBP8.91□□□□□ -0.98
CBX3-208ENST00000497498 LILRB3O75022 631 aa8.9□□□□□ -0.98
CBX3-208ENST00000497498 QPCTQ16769 361 aa8.9□□□□□ -0.98
CBX3-208ENST00000497498 BAP1Q92560 729 aa8.9□□□□□ -0.98
CBX3-208ENST00000497498 HPS1Q92902 700 aa8.9□□□□□ -0.98
CBX3-208ENST00000497498 F12P00748 615 aaPredicted RBP8.89□□□□□ -0.99
CBX3-208ENST00000497498 CSPP1Q1MSJ5 1256 aa8.89□□□□□ -0.99
CBX3-208ENST00000497498 ALDH1A1P00352 501 aa8.88□□□□□ -0.99
CBX3-208ENST00000497498 ZNF511Q8NB15 262 aa8.88□□□□□ -0.99
CBX3-208ENST00000497498 RSPH6AQ9H0K4 717 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms