RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 ZC3H13Q5T200 1668 aaKnown RBP21.23■□□□□ 0.99
PCBP4-216ENST00000497390 POLR3AO14802 1390 aaPredicted RBP21.23■□□□□ 0.99
PCBP4-216ENST00000497390 RAPGEF3O95398 923 aa21.23■□□□□ 0.99
PCBP4-216ENST00000497390 FRAT1Q92837 279 aaPredicted RBP21.23■□□□□ 0.99
PCBP4-216ENST00000497390 MTHFSP49914 203 aa21.22■□□□□ 0.99
PCBP4-216ENST00000497390 SIGLEC1Q9BZZ2 1709 aa21.22■□□□□ 0.99
PCBP4-216ENST00000497390 FAM161AQ3B820 660 aa21.21■□□□□ 0.99
PCBP4-216ENST00000497390 SBNO2Q9Y2G9 1366 aa21.21■□□□□ 0.99
PCBP4-216ENST00000497390 LMTK2Q8IWU2 1503 aa21.21■□□□□ 0.99
PCBP4-216ENST00000497390 TCP11L2Q8N4U5 519 aa21.21■□□□□ 0.99
PCBP4-216ENST00000497390 CABP2Q9NPB3 220 aa21.19■□□□□ 0.98
PCBP4-216ENST00000497390 RLBP1P12271 317 aa21.18■□□□□ 0.98
PCBP4-216ENST00000497390 CD109Q6YHK3 1445 aa21.18■□□□□ 0.98
PCBP4-216ENST00000497390 SETBP1Q9Y6X0 1596 aa21.18■□□□□ 0.98
PCBP4-216ENST00000497390 POGZQ7Z3K3 1410 aa21.18■□□□□ 0.98
PCBP4-216ENST00000497390 CANXP27824 592 aaKnown RBP21.17■□□□□ 0.98
PCBP4-216ENST00000497390 SEC24BO95487 1268 aa21.15■□□□□ 0.98
PCBP4-216ENST00000497390 CLUAP1Q96AJ1 413 aa21.15■□□□□ 0.98
PCBP4-216ENST00000497390 RUNDC1Q96C34 613 aa21.15■□□□□ 0.98
PCBP4-216ENST00000497390 STK26Q9P289 416 aa21.15■□□□□ 0.98
PCBP4-216ENST00000497390 TULP4Q9NRJ4 1543 aa21.14■□□□□ 0.98
PCBP4-216ENST00000497390 IQSEC2Q5JU85 1478 aa21.14■□□□□ 0.98
PCBP4-216ENST00000497390 ABCC3O15438 1527 aa21.14■□□□□ 0.97
PCBP4-216ENST00000497390 GLI2P10070 1586 aa21.14■□□□□ 0.97
PCBP4-216ENST00000497390 RARSP54136 660 aaKnown RBP21.14■□□□□ 0.97
PCBP4-216ENST00000497390 HECW2Q9P2P5 1572 aa21.13■□□□□ 0.97
PCBP4-216ENST00000497390 SLC24A1O60721 1099 aa21.13■□□□□ 0.97
PCBP4-216ENST00000497390 DDRGK1Q96HY6 314 aa21.12■□□□□ 0.97
PCBP4-216ENST00000497390 NPM1P06748 294 aaKnown RBP eCLIP21.12■□□□□ 0.97
PCBP4-216ENST00000497390 PCDHB15Q9Y5E8 787 aa21.11■□□□□ 0.97
PCBP4-216ENST00000497390 ARHGEF28Q8N1W1 1705 aaKnown RBP21.11■□□□□ 0.97
PCBP4-216ENST00000497390 CGNL1Q0VF96 1302 aa21.1■□□□□ 0.97
PCBP4-216ENST00000497390 PDE3AQ14432 1141 aa21.1■□□□□ 0.97
PCBP4-216ENST00000497390 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
PCBP4-216ENST00000497390 U2AF1L5P0DN76 240 aaPredicted RBP21.09■□□□□ 0.97
PCBP4-216ENST00000497390 U2AF1Q01081 240 aaKnown RBP eCLIP21.09■□□□□ 0.97
PCBP4-216ENST00000497390 IDI1Q13907 227 aa21.09■□□□□ 0.97
PCBP4-216ENST00000497390 NFKBIBQ15653 356 aa21.09■□□□□ 0.97
PCBP4-216ENST00000497390 CAMSAP1Q5T5Y3 1602 aa21.09■□□□□ 0.97
PCBP4-216ENST00000497390 MLH3Q9UHC1 1453 aa21.09■□□□□ 0.97
PCBP4-216ENST00000497390 USP19O94966 1318 aa21.09■□□□□ 0.97
PCBP4-216ENST00000497390 GGNBP2Q9H3C7 697 aa21.08■□□□□ 0.97
PCBP4-216ENST00000497390 TSR2Q969E8 191 aaKnown RBP21.08■□□□□ 0.96
PCBP4-216ENST00000497390 NEXMIFQ5QGS0 1516 aa21.07■□□□□ 0.96
PCBP4-216ENST00000497390 MYO5BQ9ULV0 1848 aa21.07■□□□□ 0.96
PCBP4-216ENST00000497390 IL27Q8NEV9 243 aa21.07■□□□□ 0.96
PCBP4-216ENST00000497390 PPM1GO15355 546 aaPredicted RBP21.07■□□□□ 0.96
PCBP4-216ENST00000497390 EVC2Q86UK5 1308 aa21.05■□□□□ 0.96
PCBP4-216ENST00000497390 A0A1W2PP64 1363 aa21.04■□□□□ 0.96
PCBP4-216ENST00000497390 ANKRD36BQ8N2N9 1353 aa21.04■□□□□ 0.96
PCBP4-216ENST00000497390 MINK1Q8N4C8 1332 aaPredicted RBP21.03■□□□□ 0.96
PCBP4-216ENST00000497390 VIRMAQ69YN4 1812 aaKnown RBP21.03■□□□□ 0.96
PCBP4-216ENST00000497390 PIK3C2BO00750 1634 aa21.03■□□□□ 0.96
PCBP4-216ENST00000497390 FBLN1P23142 703 aa21.03■□□□□ 0.96
PCBP4-216ENST00000497390 SRPK2P78362 688 aaKnown RBP21.03■□□□□ 0.96
PCBP4-216ENST00000497390 NGEFQ8N5V2 710 aa21.03■□□□□ 0.96
PCBP4-216ENST00000497390 USP32Q8NFA0 1604 aa21.02■□□□□ 0.96
PCBP4-216ENST00000497390 RPGRIP1LQ68CZ1 1315 aa21.02■□□□□ 0.96
PCBP4-216ENST00000497390 U2SURPO15042 1029 aaKnown RBP21.02■□□□□ 0.96
PCBP4-216ENST00000497390 USP35Q9P2H5 1018 aa21.02■□□□□ 0.96
PCBP4-216ENST00000497390 DAXXQ9UER7 740 aaPredicted RBP21.02■□□□□ 0.96
PCBP4-216ENST00000497390 VGFO15240 615 aaPredicted RBP21.02■□□□□ 0.95
PCBP4-216ENST00000497390 YEATS2Q9ULM3 1422 aa21.01■□□□□ 0.95
PCBP4-216ENST00000497390 CFAP53Q96M91 514 aa21.01■□□□□ 0.95
PCBP4-216ENST00000497390 WDR63Q8IWG1 891 aa21■□□□□ 0.95
PCBP4-216ENST00000497390 FRAT2O75474 233 aaPredicted RBP21■□□□□ 0.95
PCBP4-216ENST00000497390 RTN4Q9NQC3 1192 aaKnown RBP21■□□□□ 0.95
PCBP4-216ENST00000497390 DIP2CQ9Y2E4 1556 aa21■□□□□ 0.95
PCBP4-216ENST00000497390 FBXO31Q5XUX0 539 aaPredicted RBP20.99■□□□□ 0.95
PCBP4-216ENST00000497390 OSCARQ8IYS5 282 aa20.99■□□□□ 0.95
PCBP4-216ENST00000497390 PDZRN3Q9UPQ7 1066 aa20.98■□□□□ 0.95
PCBP4-216ENST00000497390 PRAM1Q96QH2 718 aa20.97■□□□□ 0.95
PCBP4-216ENST00000497390 CFAP74Q9C0B2 1584 aa20.97■□□□□ 0.95
PCBP4-216ENST00000497390 EXOSC9Q06265 439 aaKnown RBP20.96■□□□□ 0.95
PCBP4-216ENST00000497390 PLEKHF1Q96S99 279 aa20.96■□□□□ 0.95
PCBP4-216ENST00000497390 TRIM35Q9UPQ4 493 aa20.96■□□□□ 0.95
PCBP4-216ENST00000497390 FYB1O15117 783 aa20.96■□□□□ 0.95
PCBP4-216ENST00000497390 CCDC27Q2M243 656 aa20.96■□□□□ 0.95
PCBP4-216ENST00000497390 NLRP1Q9C000 1473 aa20.96■□□□□ 0.95
PCBP4-216ENST00000497390 NINLQ9Y2I6 1382 aa20.95■□□□□ 0.94
PCBP4-216ENST00000497390 ADGRB2O60241 1585 aa20.94■□□□□ 0.94
PCBP4-216ENST00000497390 ABCC11Q96J66 1382 aa20.93■□□□□ 0.94
PCBP4-216ENST00000497390 TMPOP42166 694 aaKnown RBP20.93■□□□□ 0.94
PCBP4-216ENST00000497390 CD163L1Q9NR16 1453 aa20.93■□□□□ 0.94
PCBP4-216ENST00000497390 PTPRMP28827 1452 aa20.92■□□□□ 0.94
PCBP4-216ENST00000497390 COL3A1P02461 1466 aaPredicted RBP20.92■□□□□ 0.94
PCBP4-216ENST00000497390 MYH16Q9H6N6 1097 aa20.92■□□□□ 0.94
PCBP4-216ENST00000497390 MAPK8IP3Q9UPT6 1336 aa20.92■□□□□ 0.94
PCBP4-216ENST00000497390 MVPQ14764 893 aaKnown RBP20.91■□□□□ 0.94
PCBP4-216ENST00000497390 SSH1Q8WYL5 1049 aa20.91■□□□□ 0.94
PCBP4-216ENST00000497390 TRIM27P14373 513 aa20.9■□□□□ 0.94
PCBP4-216ENST00000497390 GSE1Q14687 1217 aa20.9■□□□□ 0.94
PCBP4-216ENST00000497390 SLKQ9H2G2 1235 aaPredicted RBP20.9■□□□□ 0.94
PCBP4-216ENST00000497390 SMC4Q9NTJ3 1288 aa20.9■□□□□ 0.94
PCBP4-216ENST00000497390 RICTORQ6R327 1708 aa20.9■□□□□ 0.94
PCBP4-216ENST00000497390 PMFBP1Q8TBY8 1022 aa20.9■□□□□ 0.94
PCBP4-216ENST00000497390 BRPF3Q9ULD4 1205 aa20.9■□□□□ 0.94
PCBP4-216ENST00000497390 POGKQ9P215 609 aa20.89■□□□□ 0.94
PCBP4-216ENST00000497390 NSD2O96028 1365 aa20.89■□□□□ 0.93
PCBP4-216ENST00000497390 ZKSCAN2Q63HK3 967 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms