RNA–Protein interactions for RNA: ENST00000496892.5

POLR1A-210, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-210ENST00000496892 PTCH1Q13635 1447 aa20.53■□□□□ 0.88
POLR1A-210ENST00000496892 TRPC5Q9UL62 973 aaPredicted RBP20.53■□□□□ 0.88
POLR1A-210ENST00000496892 DHX57Q6P158 1386 aaKnown RBP20.53■□□□□ 0.88
POLR1A-210ENST00000496892 ROBO2Q9HCK4 1378 aa20.53■□□□□ 0.88
POLR1A-210ENST00000496892 FNBP4Q8N3X1 1017 aaPredicted RBP20.51■□□□□ 0.87
POLR1A-210ENST00000496892 KIF1BO60333 1816 aa20.49■□□□□ 0.87
POLR1A-210ENST00000496892 ATRNO75882 1429 aa20.49■□□□□ 0.87
POLR1A-210ENST00000496892 COL22A1Q8NFW1 1626 aaPredicted RBP20.47■□□□□ 0.87
POLR1A-210ENST00000496892 PRAG1Q86YV5 1406 aa20.46■□□□□ 0.87
POLR1A-210ENST00000496892 VGFO15240 615 aaPredicted RBP20.46■□□□□ 0.87
POLR1A-210ENST00000496892 ZRANB1Q9UGI0 708 aa20.46■□□□□ 0.87
POLR1A-210ENST00000496892 MYOM2P54296 1465 aa20.44■□□□□ 0.86
POLR1A-210ENST00000496892 FOXD1Q16676 465 aa20.43■□□□□ 0.86
POLR1A-210ENST00000496892 BCL9LQ86UU0 1499 aa20.43■□□□□ 0.86
POLR1A-210ENST00000496892 ESCO1Q5FWF5 840 aa20.42■□□□□ 0.86
POLR1A-210ENST00000496892 EP400Q96L91 3159 aa20.41■□□□□ 0.86
POLR1A-210ENST00000496892 NPHP3Q7Z494 1330 aa20.41■□□□□ 0.86
POLR1A-210ENST00000496892 PXDNQ92626 1479 aa20.4■□□□□ 0.86
POLR1A-210ENST00000496892 RPGRIP1LQ68CZ1 1315 aa20.39■□□□□ 0.85
POLR1A-210ENST00000496892 XPCQ01831 940 aaPredicted RBP20.39■□□□□ 0.85
POLR1A-210ENST00000496892 CCDC125Q86Z20 511 aa20.39■□□□□ 0.85
POLR1A-210ENST00000496892 CDC42BPGQ6DT37 1551 aa20.38■□□□□ 0.85
POLR1A-210ENST00000496892 MARF1Q9Y4F3 1742 aaKnown RBP20.38■□□□□ 0.85
POLR1A-210ENST00000496892 FOXO3O43524 673 aa20.37■□□□□ 0.85
POLR1A-210ENST00000496892 GJD4Q96KN9 370 aaPredicted RBP20.37■□□□□ 0.85
POLR1A-210ENST00000496892 MPHOSPH9Q99550 1183 aa20.37■□□□□ 0.85
POLR1A-210ENST00000496892 PPLO60437 1756 aa20.36■□□□□ 0.85
POLR1A-210ENST00000496892 SLC4A1APQ9BWU0 796 aaKnown RBP20.33■□□□□ 0.85
POLR1A-210ENST00000496892 LRPPRCP42704 1394 aaKnown RBP20.33■□□□□ 0.84
POLR1A-210ENST00000496892 NUTM2FA1L443 756 aa20.32■□□□□ 0.84
POLR1A-210ENST00000496892 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.31■□□□□ 0.84
POLR1A-210ENST00000496892 WAPLQ7Z5K2 1190 aa20.31■□□□□ 0.84
POLR1A-210ENST00000496892 UNC5CLQ8IV45 518 aa20.31■□□□□ 0.84
POLR1A-210ENST00000496892 RALGAPBQ86X10 1494 aa20.3■□□□□ 0.84
POLR1A-210ENST00000496892 GLI3P10071 1580 aa20.3■□□□□ 0.84
POLR1A-210ENST00000496892 STK26Q9P289 416 aa20.3■□□□□ 0.84
POLR1A-210ENST00000496892 SLIT2O94813 1529 aa20.3■□□□□ 0.84
POLR1A-210ENST00000496892 ADGRF5Q8IZF2 1346 aa20.29■□□□□ 0.84
POLR1A-210ENST00000496892 BLMP54132 1417 aaPredicted RBP20.29■□□□□ 0.84
POLR1A-210ENST00000496892 TIMELESSQ9UNS1 1208 aa20.29■□□□□ 0.84
POLR1A-210ENST00000496892 SPATA31A3Q5VYP0 1347 aa20.27■□□□□ 0.84
POLR1A-210ENST00000496892 TECPR2O15040 1411 aa20.27■□□□□ 0.84
POLR1A-210ENST00000496892 PLEKHH1Q9ULM0 1364 aa20.26■□□□□ 0.83
POLR1A-210ENST00000496892 DEFB132Q7Z7B7 95 aa20.25■□□□□ 0.83
POLR1A-210ENST00000496892 BRWD3Q6RI45 1802 aa20.25■□□□□ 0.83
POLR1A-210ENST00000496892 USP32Q8NFA0 1604 aa20.24■□□□□ 0.83
POLR1A-210ENST00000496892 TMEM132EQ6IEE7 984 aa20.24■□□□□ 0.83
POLR1A-210ENST00000496892 FMN2Q9NZ56 1722 aa20.24■□□□□ 0.83
POLR1A-210ENST00000496892 ABCC11Q96J66 1382 aa20.23■□□□□ 0.83
POLR1A-210ENST00000496892 KIF1AQ12756 1690 aa20.23■□□□□ 0.83
POLR1A-210ENST00000496892 CCDC144AA2RUR9 1427 aa20.23■□□□□ 0.83
POLR1A-210ENST00000496892 SEPT12Q8IYM1 358 aa20.23■□□□□ 0.83
POLR1A-210ENST00000496892 RGL3Q3MIN7 710 aa20.22■□□□□ 0.83
POLR1A-210ENST00000496892 KRT28Q7Z3Y7 464 aa20.22■□□□□ 0.83
POLR1A-210ENST00000496892 KNDC1Q76NI1 1749 aa20.22■□□□□ 0.83
POLR1A-210ENST00000496892 SF3B2Q13435 895 aaKnown RBP20.2■□□□□ 0.82
POLR1A-210ENST00000496892 NEUROD1Q13562 356 aa20.2■□□□□ 0.82
POLR1A-210ENST00000496892 VPS72Q15906 364 aa20.2■□□□□ 0.82
POLR1A-210ENST00000496892 ANKRD30BQ9BXX2 1392 aa20.2■□□□□ 0.82
POLR1A-210ENST00000496892 SPATA31E1Q6ZUB1 1445 aa20.19■□□□□ 0.82
POLR1A-210ENST00000496892 HAP1P54257 671 aaPredicted RBP20.19■□□□□ 0.82
POLR1A-210ENST00000496892 CABLES1Q8TDN4 633 aa20.19■□□□□ 0.82
POLR1A-210ENST00000496892 IFT172Q9UG01 1749 aa20.19■□□□□ 0.82
POLR1A-210ENST00000496892 TNS3Q68CZ2 1445 aa20.19■□□□□ 0.82
POLR1A-210ENST00000496892 SIN3AQ96ST3 1273 aa20.18■□□□□ 0.82
POLR1A-210ENST00000496892 YTHDC2Q9H6S0 1430 aaKnown RBP20.18■□□□□ 0.82
POLR1A-210ENST00000496892 PLEKHG5O94827 1062 aa20.17■□□□□ 0.82
POLR1A-210ENST00000496892 PHF8Q9UPP1 1060 aa20.17■□□□□ 0.82
POLR1A-210ENST00000496892 CCDC9Q9Y3X0 531 aaKnown RBP20.17■□□□□ 0.82
POLR1A-210ENST00000496892 PIK3C2GO75747 1445 aa20.17■□□□□ 0.82
POLR1A-210ENST00000496892 ONECUT3O60422 494 aaPredicted RBP20.16■□□□□ 0.82
POLR1A-210ENST00000496892 PLCH1Q4KWH8 1693 aa20.16■□□□□ 0.82
POLR1A-210ENST00000496892 RGPD8O14715 1765 aaPredicted RBP20.16■□□□□ 0.82
POLR1A-210ENST00000496892 PSME1Q06323 249 aa20.15■□□□□ 0.82
POLR1A-210ENST00000496892 KRT27Q7Z3Y8 459 aa20.15■□□□□ 0.82
POLR1A-210ENST00000496892 NWD2Q9ULI1 1742 aa20.15■□□□□ 0.82
POLR1A-210ENST00000496892 LRP5O75197 1615 aa20.14■□□□□ 0.81
POLR1A-210ENST00000496892 SBNO1A3KN83 1393 aa20.13■□□□□ 0.81
POLR1A-210ENST00000496892 TONSLQ96HA7 1378 aa20.13■□□□□ 0.81
POLR1A-210ENST00000496892 SIRT1Q96EB6 747 aa20.13■□□□□ 0.81
POLR1A-210ENST00000496892 ABCA3Q99758 1704 aa20.13■□□□□ 0.81
POLR1A-210ENST00000496892 LMOD2Q6P5Q4 547 aa20.12■□□□□ 0.81
POLR1A-210ENST00000496892 NRXN1Q9ULB1 1477 aa20.11■□□□□ 0.81
POLR1A-210ENST00000496892 ARHGEF10O15013 1369 aa20.1■□□□□ 0.81
POLR1A-210ENST00000496892 PSDA5PKW4 1024 aaPredicted RBP20.1■□□□□ 0.81
POLR1A-210ENST00000496892 FAM83GA6ND36 823 aa20.1■□□□□ 0.81
POLR1A-210ENST00000496892 A0A0G2JS52 829 aa20.09■□□□□ 0.81
POLR1A-210ENST00000496892 MYT1Q01538 1121 aa20.09■□□□□ 0.81
POLR1A-210ENST00000496892 C14orf93Q9H972 538 aaKnown RBP20.09■□□□□ 0.81
POLR1A-210ENST00000496892 BAG6P46379 1132 aa20.08■□□□□ 0.81
POLR1A-210ENST00000496892 SAFB2Q14151 953 aaKnown RBP eCLIP20.08■□□□□ 0.81
POLR1A-210ENST00000496892 FAM98CQ17RN3 349 aaKnown RBP20.07■□□□□ 0.8
POLR1A-210ENST00000496892 CFAP70Q5T0N1 1121 aa20.06■□□□□ 0.8
POLR1A-210ENST00000496892 PMFBP1Q8TBY8 1022 aa20.06■□□□□ 0.8
POLR1A-210ENST00000496892 PRAM1Q96QH2 718 aa20.06■□□□□ 0.8
POLR1A-210ENST00000496892 NRAPQ86VF7 1730 aa20.05■□□□□ 0.8
POLR1A-210ENST00000496892 BTG4Q9NY30 223 aa20.04■□□□□ 0.8
POLR1A-210ENST00000496892 EN1Q05925 392 aaPredicted RBP20.03■□□□□ 0.8
POLR1A-210ENST00000496892 ANKARQ7Z5J8 1434 aa20.02■□□□□ 0.8
POLR1A-210ENST00000496892 FAM182BQ5T319 152 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms