RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 IVLP07476 585 aa6.54□□□□□ -1.36
PALMD-202ENST00000496843 RBBP5Q15291 538 aaKnown RBP6.54□□□□□ -1.36
PALMD-202ENST00000496843 CCDC174Q6PII3 467 aa6.54□□□□□ -1.36
PALMD-202ENST00000496843 BTN2A1Q7KYR7 527 aa6.54□□□□□ -1.36
PALMD-202ENST00000496843 CEP120Q8N960 986 aa6.54□□□□□ -1.36
PALMD-202ENST00000496843 WHAMMQ8TF30 809 aa6.54□□□□□ -1.36
PALMD-202ENST00000496843 DDX12PQ92771 950 aa6.54□□□□□ -1.36
PALMD-202ENST00000496843 P3H3Q8IVL6 736 aa6.53□□□□□ -1.36
PALMD-202ENST00000496843 NOL3O60936 208 aaKnown RBP6.53□□□□□ -1.36
PALMD-202ENST00000496843 SASS6Q6UVJ0 657 aa6.53□□□□□ -1.36
PALMD-202ENST00000496843 NOL10Q9BSC4 688 aaKnown RBP6.53□□□□□ -1.36
PALMD-202ENST00000496843 LIMCH1Q9UPQ0 1083 aa6.53□□□□□ -1.36
PALMD-202ENST00000496843 PRPF40AO75400 957 aaKnown RBP6.53□□□□□ -1.36
PALMD-202ENST00000496843 NFKBIBQ15653 356 aa6.53□□□□□ -1.36
PALMD-202ENST00000496843 CCDC158Q5M9N0 1113 aa6.53□□□□□ -1.36
PALMD-202ENST00000496843 SH2D4BQ5SQS7 431 aa6.53□□□□□ -1.36
PALMD-202ENST00000496843 PRPF31Q8WWY3 499 aaKnown RBP6.53□□□□□ -1.36
PALMD-202ENST00000496843 RWDD1Q9H446 243 aaPredicted RBP6.53□□□□□ -1.36
PALMD-202ENST00000496843 HSPA4P34932 840 aa6.53□□□□□ -1.36
PALMD-202ENST00000496843 ANAPC15P60006 121 aa6.53□□□□□ -1.36
PALMD-202ENST00000496843 FOXD4L5Q5VV16 416 aaPredicted RBP6.53□□□□□ -1.36
PALMD-202ENST00000496843 KLHL10Q6JEL2 608 aa6.53□□□□□ -1.36
PALMD-202ENST00000496843 RPUSD2Q8IZ73 545 aaKnown RBP6.53□□□□□ -1.36
PALMD-202ENST00000496843 FOXD4L4Q8WXT5 416 aaPredicted RBP6.53□□□□□ -1.36
PALMD-202ENST00000496843 DNAJC21Q5F1R6 531 aaKnown RBP6.52□□□□□ -1.37
PALMD-202ENST00000496843 C6orf163Q5TEZ5 329 aa6.52□□□□□ -1.37
PALMD-202ENST00000496843 RPAINQ86UA6 219 aa6.52□□□□□ -1.37
PALMD-202ENST00000496843 SREK1Q8WXA9 508 aaKnown RBP6.52□□□□□ -1.37
PALMD-202ENST00000496843 CHMP4CQ96CF2 233 aa6.52□□□□□ -1.37
PALMD-202ENST00000496843 CRACR2AQ9BSW2 395 aa6.52□□□□□ -1.37
PALMD-202ENST00000496843 UBXN4Q92575 508 aa6.52□□□□□ -1.37
PALMD-202ENST00000496843 A0A1B0GUL7 405 aa6.52□□□□□ -1.37
PALMD-202ENST00000496843 GMNNO75496 209 aa6.52□□□□□ -1.37
PALMD-202ENST00000496843 GCOM1H8Y6P7 765 aaPredicted RBP6.51□□□□□ -1.37
PALMD-202ENST00000496843 NEBLO76041 1014 aa6.51□□□□□ -1.37
PALMD-202ENST00000496843 MYZAPP0CAP1 466 aa6.51□□□□□ -1.37
PALMD-202ENST00000496843 CEP57Q86XR8 500 aa6.51□□□□□ -1.37
PALMD-202ENST00000496843 CCDC47Q96A33 483 aaKnown RBP6.51□□□□□ -1.37
PALMD-202ENST00000496843 GBP7Q8N8V2 638 aaPredicted RBP6.51□□□□□ -1.37
PALMD-202ENST00000496843 USP6NLQ92738 828 aa6.51□□□□□ -1.37
PALMD-202ENST00000496843 LUC7L2Q9Y383 392 aaKnown RBP6.51□□□□□ -1.37
PALMD-202ENST00000496843 SLC4A3P48751 1232 aa6.51□□□□□ -1.37
PALMD-202ENST00000496843 GOLGA2Q08379 1002 aa6.51□□□□□ -1.37
PALMD-202ENST00000496843 FBF1Q8TES7 1133 aa6.51□□□□□ -1.37
PALMD-202ENST00000496843 RABGAP1Q9Y3P9 1069 aa6.51□□□□□ -1.37
PALMD-202ENST00000496843 KIF2AO00139 706 aaPredicted RBP6.5□□□□□ -1.37
PALMD-202ENST00000496843 ZNF853P0CG23 659 aa6.5□□□□□ -1.37
PALMD-202ENST00000496843 SPECC1LQ69YQ0 1117 aa6.5□□□□□ -1.37
PALMD-202ENST00000496843 IQCEQ6IPM2 695 aa6.5□□□□□ -1.37
PALMD-202ENST00000496843 FEZ1Q99689 392 aa6.5□□□□□ -1.37
PALMD-202ENST00000496843 FILIP1LQ4L180 1135 aa6.5□□□□□ -1.37
PALMD-202ENST00000496843 TRIM63Q969Q1 353 aa6.5□□□□□ -1.37
PALMD-202ENST00000496843 H3BQV1 296 aa6.5□□□□□ -1.37
PALMD-202ENST00000496843 KIF20AO95235 890 aa6.5□□□□□ -1.37
PALMD-202ENST00000496843 CLNS1AP54105 237 aaKnown RBP6.5□□□□□ -1.37
PALMD-202ENST00000496843 IFFO2Q5TF58 517 aa6.5□□□□□ -1.37
PALMD-202ENST00000496843 LRRC43Q8N309 656 aa6.5□□□□□ -1.37
PALMD-202ENST00000496843 MICALL1Q8N3F8 863 aa6.5□□□□□ -1.37
PALMD-202ENST00000496843 NAT10Q9H0A0 1025 aaKnown RBP6.5□□□□□ -1.37
PALMD-202ENST00000496843 FAM114A2Q9NRY5 505 aa6.5□□□□□ -1.37
PALMD-202ENST00000496843 EIF4G2P78344 907 aaKnown RBP eCLIP6.5□□□□□ -1.37
PALMD-202ENST00000496843 ZWINTO95229 277 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 STMN1P16949 149 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 ATP6V1AP38606 617 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 PDE1CQ14123 709 aaPredicted RBP6.49□□□□□ -1.37
PALMD-202ENST00000496843 WHAMMP3Q1A5X7 153 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 PPP4R3BQ5MIZ7 849 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 CEP128Q6ZU80 1094 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 CCDC144CPQ8IYA2 1237 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 SMAP1Q8IYB5 467 aaPredicted RBP6.49□□□□□ -1.37
PALMD-202ENST00000496843 TSPYL2Q9H2G4 693 aaPredicted RBP6.49□□□□□ -1.37
PALMD-202ENST00000496843 TRIM5Q9C035 493 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 SPATS2LQ9NUQ6 558 aaKnown RBP6.49□□□□□ -1.37
PALMD-202ENST00000496843 TRIM35Q9UPQ4 493 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 ANKRD18BA2A2Z9 1011 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 TACC1O75410 805 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 PDE4AP27815 886 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 LMAN1P49257 510 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 SETDB1Q15047 1291 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 ERC1Q8IUD2 1116 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 GCKP35557 465 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 DIXDC1Q155Q3 683 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 CCDC92Q53HC0 331 aaPredicted RBP6.49□□□□□ -1.37
PALMD-202ENST00000496843 FILIP1Q7Z7B0 1213 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 ZSCAN30Q86W11 494 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 PDILTQ8N807 584 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 MORC4Q8TE76 937 aa6.49□□□□□ -1.37
PALMD-202ENST00000496843 KIF4AO95239 1232 aa6.48□□□□□ -1.37
PALMD-202ENST00000496843 MAP9Q49MG5 647 aa6.48□□□□□ -1.37
PALMD-202ENST00000496843 WDR63Q8IWG1 891 aa6.48□□□□□ -1.37
PALMD-202ENST00000496843 SMARCC1Q92922 1105 aaPredicted RBP6.48□□□□□ -1.37
PALMD-202ENST00000496843 DRC1Q96MC2 740 aa6.48□□□□□ -1.37
PALMD-202ENST00000496843 CEP104O60308 925 aa6.48□□□□□ -1.37
PALMD-202ENST00000496843 TERF2IPQ9NYB0 399 aa6.48□□□□□ -1.37
PALMD-202ENST00000496843 DYNC1I1O14576 645 aa6.48□□□□□ -1.37
PALMD-202ENST00000496843 TXLNAP40222 546 aa6.48□□□□□ -1.37
PALMD-202ENST00000496843 JAKMIP3Q5VZ66 844 aa6.48□□□□□ -1.37
PALMD-202ENST00000496843 ARMCX6Q7L4S7 300 aa6.48□□□□□ -1.37
PALMD-202ENST00000496843 MIER3Q7Z3K6 550 aa6.48□□□□□ -1.37
PALMD-202ENST00000496843 BICD2Q8TD16 824 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms