RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 NOC3LQ8WTT2 800 aaKnown RBP10.61□□□□□ -0.71
MACF1-224ENST00000496804 VPS37CA5D8V6 355 aaPredicted RBP10.61□□□□□ -0.71
MACF1-224ENST00000496804 UTP14CQ5TAP6 766 aaKnown RBP10.61□□□□□ -0.71
MACF1-224ENST00000496804 KRT222Q8N1A0 295 aa10.61□□□□□ -0.71
MACF1-224ENST00000496804 ACBD3Q9H3P7 528 aa10.61□□□□□ -0.71
MACF1-224ENST00000496804 LRPPRCP42704 1394 aaKnown RBP10.61□□□□□ -0.71
MACF1-224ENST00000496804 GORABQ5T7V8 394 aa10.61□□□□□ -0.71
MACF1-224ENST00000496804 SEC24BO95487 1268 aa10.61□□□□□ -0.71
MACF1-224ENST00000496804 GTF2F1P35269 517 aaKnown RBP eCLIP10.61□□□□□ -0.71
MACF1-224ENST00000496804 DUSP27Q5VZP5 1158 aa10.61□□□□□ -0.71
MACF1-224ENST00000496804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.61□□□□□ -0.71
MACF1-224ENST00000496804 FSD2A1L4K1 749 aa10.6□□□□□ -0.71
MACF1-224ENST00000496804 RNF20Q5VTR2 975 aa10.6□□□□□ -0.71
MACF1-224ENST00000496804 CUX1P39880 1505 aa10.6□□□□□ -0.71
MACF1-224ENST00000496804 LRSAM1Q6UWE0 723 aa10.6□□□□□ -0.71
MACF1-224ENST00000496804 FEZ1Q99689 392 aa10.6□□□□□ -0.71
MACF1-224ENST00000496804 FIBPO43427 364 aa10.6□□□□□ -0.71
MACF1-224ENST00000496804 HSP90B1P14625 803 aaKnown RBP10.6□□□□□ -0.71
MACF1-224ENST00000496804 RBM25P49756 843 aaKnown RBP10.6□□□□□ -0.71
MACF1-224ENST00000496804 NOL10Q9BSC4 688 aaKnown RBP10.6□□□□□ -0.71
MACF1-224ENST00000496804 RBM27Q9P2N5 1060 aaKnown RBP10.6□□□□□ -0.71
MACF1-224ENST00000496804 RDXP35241 583 aaKnown RBP10.59□□□□□ -0.71
MACF1-224ENST00000496804 CCDC144AA2RUR9 1427 aa10.59□□□□□ -0.71
MACF1-224ENST00000496804 H0YHG0 523 aa10.59□□□□□ -0.71
MACF1-224ENST00000496804 GCC1Q96CN9 775 aa10.59□□□□□ -0.71
MACF1-224ENST00000496804 OGFRQ9NZT2 677 aa10.59□□□□□ -0.71
MACF1-224ENST00000496804 GTF2A1P52655 376 aaPredicted RBP10.59□□□□□ -0.71
MACF1-224ENST00000496804 CHD1LQ86WJ1 897 aa10.59□□□□□ -0.71
MACF1-224ENST00000496804 GPATCH11Q8N954 259 aa10.59□□□□□ -0.71
MACF1-224ENST00000496804 WDR33Q9C0J8 1336 aaKnown RBP10.59□□□□□ -0.71
MACF1-224ENST00000496804 TNNT1P13805 278 aa10.58□□□□□ -0.72
MACF1-224ENST00000496804 TRIM34Q9BYJ4 488 aa10.58□□□□□ -0.72
MACF1-224ENST00000496804 ELL2O00472 640 aaPredicted RBP10.58□□□□□ -0.72
MACF1-224ENST00000496804 ADCY5O95622 1261 aa10.58□□□□□ -0.72
MACF1-224ENST00000496804 CCDC27Q2M243 656 aa10.58□□□□□ -0.72
MACF1-224ENST00000496804 MYRIPQ8NFW9 859 aa10.58□□□□□ -0.72
MACF1-224ENST00000496804 IPO4Q8TEX9 1081 aaKnown RBP10.58□□□□□ -0.72
MACF1-224ENST00000496804 ZNF830Q96NB3 372 aaPredicted RBP10.58□□□□□ -0.72
MACF1-224ENST00000496804 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
MACF1-224ENST00000496804 EIF4G1Q04637 1599 aaKnown RBP10.58□□□□□ -0.72
MACF1-224ENST00000496804 H3BQV1 296 aa10.58□□□□□ -0.72
MACF1-224ENST00000496804 PRIM1P49642 420 aaKnown RBP10.58□□□□□ -0.72
MACF1-224ENST00000496804 RAB3GAP1Q15042 981 aa10.58□□□□□ -0.72
MACF1-224ENST00000496804 IFFO2Q5TF58 517 aa10.58□□□□□ -0.72
MACF1-224ENST00000496804 TCP11L2Q8N4U5 519 aa10.58□□□□□ -0.72
MACF1-224ENST00000496804 C16orf45Q96MC5 204 aaPredicted RBP10.58□□□□□ -0.72
MACF1-224ENST00000496804 SENP3Q9H4L4 574 aaPredicted RBP10.58□□□□□ -0.72
MACF1-224ENST00000496804 NAIPQ13075 1403 aa10.58□□□□□ -0.72
MACF1-224ENST00000496804 TMCO3Q6UWJ1 677 aa10.57□□□□□ -0.72
MACF1-224ENST00000496804 SF3A1Q15459 793 aaKnown RBP10.57□□□□□ -0.72
MACF1-224ENST00000496804 KDM2BQ8NHM5 1336 aa10.57□□□□□ -0.72
MACF1-224ENST00000496804 USP8P40818 1118 aa10.57□□□□□ -0.72
MACF1-224ENST00000496804 UVSSAQ2YD98 709 aa10.57□□□□□ -0.72
MACF1-224ENST00000496804 NKTRP30414 1462 aaKnown RBP10.57□□□□□ -0.72
MACF1-224ENST00000496804 RTF1Q92541 710 aaKnown RBP10.57□□□□□ -0.72
MACF1-224ENST00000496804 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.57□□□□□ -0.72
MACF1-224ENST00000496804 NCOA2Q15596 1464 aa10.56□□□□□ -0.72
MACF1-224ENST00000496804 PRXQ9BXM0 1461 aa10.56□□□□□ -0.72
MACF1-224ENST00000496804 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
MACF1-224ENST00000496804 FAM177BA6PVY3 158 aa10.56□□□□□ -0.72
MACF1-224ENST00000496804 PTPN14Q15678 1187 aa10.56□□□□□ -0.72
MACF1-224ENST00000496804 SLC4A10Q6U841 1118 aa10.56□□□□□ -0.72
MACF1-224ENST00000496804 SNX21Q969T3 373 aa10.56□□□□□ -0.72
MACF1-224ENST00000496804 SMC5Q8IY18 1101 aa10.56□□□□□ -0.72
MACF1-224ENST00000496804 POLR3GO15318 223 aaPredicted RBP10.55□□□□□ -0.72
MACF1-224ENST00000496804 UBXN4Q92575 508 aa10.55□□□□□ -0.72
MACF1-224ENST00000496804 PPP1R9BQ96SB3 815 aa10.55□□□□□ -0.72
MACF1-224ENST00000496804 API5Q9BZZ5 524 aaKnown RBP10.55□□□□□ -0.72
MACF1-224ENST00000496804 SYNJ1O43426 1573 aa10.55□□□□□ -0.72
MACF1-224ENST00000496804 GABPB1Q06547 395 aaPredicted RBP10.55□□□□□ -0.72
MACF1-224ENST00000496804 BMS1Q14692 1282 aaKnown RBP10.55□□□□□ -0.72
MACF1-224ENST00000496804 CCDC183Q5T5S1 534 aa10.55□□□□□ -0.72
MACF1-224ENST00000496804 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.55□□□□□ -0.72
MACF1-224ENST00000496804 CCP110O43303 1012 aa10.55□□□□□ -0.72
MACF1-224ENST00000496804 ZNF500O60304 480 aaPredicted RBP10.55□□□□□ -0.72
MACF1-224ENST00000496804 SMARCA4P51532 1647 aa10.55□□□□□ -0.72
MACF1-224ENST00000496804 CASKIN1Q8WXD9 1431 aa10.55□□□□□ -0.72
MACF1-224ENST00000496804 SRPK2P78362 688 aaKnown RBP10.55□□□□□ -0.72
MACF1-224ENST00000496804 TTC12Q9H892 705 aaPredicted RBP10.55□□□□□ -0.72
MACF1-224ENST00000496804 KIF18AQ8NI77 898 aa10.54□□□□□ -0.72
MACF1-224ENST00000496804 PAXBP1Q9Y5B6 917 aa10.54□□□□□ -0.72
MACF1-224ENST00000496804 KIF2AO00139 706 aaPredicted RBP10.54□□□□□ -0.72
MACF1-224ENST00000496804 U2AF2P26368 475 aaKnown RBP eCLIP10.54□□□□□ -0.72
MACF1-224ENST00000496804 PATL2C9JE40 543 aaKnown RBP10.54□□□□□ -0.72
MACF1-224ENST00000496804 ERCC4Q92889 916 aaPredicted RBP10.54□□□□□ -0.72
MACF1-224ENST00000496804 NAT10Q9H0A0 1025 aaKnown RBP10.54□□□□□ -0.72
MACF1-224ENST00000496804 ATF7IPQ6VMQ6 1270 aa10.53□□□□□ -0.72
MACF1-224ENST00000496804 CCDC73Q6ZRK6 1079 aa10.53□□□□□ -0.72
MACF1-224ENST00000496804 FBXW7Q969H0 707 aa10.53□□□□□ -0.72
MACF1-224ENST00000496804 EXOSC9Q06265 439 aaKnown RBP10.53□□□□□ -0.72
MACF1-224ENST00000496804 RBSNQ9H1K0 784 aa10.53□□□□□ -0.72
MACF1-224ENST00000496804 SKIDA1Q1XH10 827 aa10.53□□□□□ -0.72
MACF1-224ENST00000496804 TXLNBQ8N3L3 684 aa10.53□□□□□ -0.72
MACF1-224ENST00000496804 TNMDQ9H2S6 317 aa10.53□□□□□ -0.72
MACF1-224ENST00000496804 CCDC70Q6NSX1 233 aa10.53□□□□□ -0.72
MACF1-224ENST00000496804 NOB1Q9ULX3 412 aaKnown RBP10.53□□□□□ -0.72
MACF1-224ENST00000496804 ERC2O15083 957 aa10.52□□□□□ -0.72
MACF1-224ENST00000496804 RARSP54136 660 aaKnown RBP10.52□□□□□ -0.72
MACF1-224ENST00000496804 FILIP1Q7Z7B0 1213 aa10.52□□□□□ -0.72
MACF1-224ENST00000496804 IGF1RP08069 1367 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms