RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-222ENST00000496574 MCM2P49736 904 aa17.17■□□□□ 0.34
PKD1-222ENST00000496574 HDGFP51858 240 aaKnown RBP17.17■□□□□ 0.34
PKD1-222ENST00000496574 WDR63Q8IWG1 891 aa17.17■□□□□ 0.34
PKD1-222ENST00000496574 CCAR2Q8N163 923 aaKnown RBP17.16■□□□□ 0.34
PKD1-222ENST00000496574 CCDC34Q96HJ3 373 aa17.16■□□□□ 0.34
PKD1-222ENST00000496574 SASS6Q6UVJ0 657 aa17.16■□□□□ 0.34
PKD1-222ENST00000496574 ATF7IPQ6VMQ6 1270 aa17.16■□□□□ 0.34
PKD1-222ENST00000496574 TSR2Q969E8 191 aaKnown RBP17.16■□□□□ 0.34
PKD1-222ENST00000496574 LETM1O95202 739 aaPredicted RBP17.15■□□□□ 0.34
PKD1-222ENST00000496574 GPS2Q13227 327 aa17.15■□□□□ 0.34
PKD1-222ENST00000496574 CT47B1P0C2W7 299 aaPredicted RBP17.15■□□□□ 0.34
PKD1-222ENST00000496574 HOMER1Q86YM7 354 aa17.15■□□□□ 0.34
PKD1-222ENST00000496574 NOB1Q9ULX3 412 aaKnown RBP17.14■□□□□ 0.34
PKD1-222ENST00000496574 CCDC66A2RUB6 948 aa17.14■□□□□ 0.33
PKD1-222ENST00000496574 MPNDQ8N594 471 aa17.14■□□□□ 0.33
PKD1-222ENST00000496574 A0A0G2JS52 829 aa17.14■□□□□ 0.33
PKD1-222ENST00000496574 DUSP27Q5VZP5 1158 aa17.14■□□□□ 0.33
PKD1-222ENST00000496574 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
PKD1-222ENST00000496574 VGFO15240 615 aaPredicted RBP17.14■□□□□ 0.33
PKD1-222ENST00000496574 CHD1LQ86WJ1 897 aa17.14■□□□□ 0.33
PKD1-222ENST00000496574 ERBINQ96RT1 1412 aa17.13■□□□□ 0.33
PKD1-222ENST00000496574 XRCC6P12956 609 aaKnown RBP eCLIP17.13■□□□□ 0.33
PKD1-222ENST00000496574 WWC1Q8IX03 1113 aa17.13■□□□□ 0.33
PKD1-222ENST00000496574 C1orf115Q9H7X2 142 aa17.12■□□□□ 0.33
PKD1-222ENST00000496574 GGNBP2Q9H3C7 697 aa17.12■□□□□ 0.33
PKD1-222ENST00000496574 ARGLU1Q9NWB6 273 aaPredicted RBP17.11■□□□□ 0.33
PKD1-222ENST00000496574 LRPPRCP42704 1394 aaKnown RBP17.11■□□□□ 0.33
PKD1-222ENST00000496574 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.11■□□□□ 0.33
PKD1-222ENST00000496574 TBC1D32Q96NH3 1257 aa17.11■□□□□ 0.33
PKD1-222ENST00000496574 TRIM5Q9C035 493 aa17.11■□□□□ 0.33
PKD1-222ENST00000496574 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
PKD1-222ENST00000496574 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.1■□□□□ 0.33
PKD1-222ENST00000496574 DAPK1P53355 1430 aa17.1■□□□□ 0.33
PKD1-222ENST00000496574 MINK1Q8N4C8 1332 aaPredicted RBP17.1■□□□□ 0.33
PKD1-222ENST00000496574 TPD52L1Q16890 204 aaPredicted RBP17.1■□□□□ 0.33
PKD1-222ENST00000496574 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
PKD1-222ENST00000496574 COG3Q96JB2 828 aa17.1■□□□□ 0.33
PKD1-222ENST00000496574 SCAPERQ9BY12 1400 aa17.09■□□□□ 0.33
PKD1-222ENST00000496574 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
PKD1-222ENST00000496574 CFAP70Q5T0N1 1121 aa17.09■□□□□ 0.33
PKD1-222ENST00000496574 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
PKD1-222ENST00000496574 PANK2Q9BZ23 570 aa17.09■□□□□ 0.33
PKD1-222ENST00000496574 FIBPO43427 364 aa17.08■□□□□ 0.33
PKD1-222ENST00000496574 C8orf34Q49A92 452 aa17.08■□□□□ 0.33
PKD1-222ENST00000496574 MNS1Q8NEH6 495 aa17.08■□□□□ 0.33
PKD1-222ENST00000496574 HMOX1P09601 288 aa17.08■□□□□ 0.32
PKD1-222ENST00000496574 NKTRP30414 1462 aaKnown RBP17.08■□□□□ 0.32
PKD1-222ENST00000496574 RARSP54136 660 aaKnown RBP17.08■□□□□ 0.32
PKD1-222ENST00000496574 XPCQ01831 940 aaPredicted RBP17.08■□□□□ 0.32
PKD1-222ENST00000496574 RPRD2Q5VT52 1461 aaKnown RBP17.07■□□□□ 0.32
PKD1-222ENST00000496574 CCDC27Q2M243 656 aa17.07■□□□□ 0.32
PKD1-222ENST00000496574 SPC24Q8NBT2 197 aa17.07■□□□□ 0.32
PKD1-222ENST00000496574 FKBP5Q13451 457 aaPredicted RBP17.07■□□□□ 0.32
PKD1-222ENST00000496574 AMPHP49418 695 aa17.07■□□□□ 0.32
PKD1-222ENST00000496574 RNF20Q5VTR2 975 aa17.07■□□□□ 0.32
PKD1-222ENST00000496574 SYCE3A1L190 88 aa17.06■□□□□ 0.32
PKD1-222ENST00000496574 IGHDP01880 384 aa17.06■□□□□ 0.32
PKD1-222ENST00000496574 CCDC73Q6ZRK6 1079 aa17.06■□□□□ 0.32
PKD1-222ENST00000496574 ERC2O15083 957 aa17.06■□□□□ 0.32
PKD1-222ENST00000496574 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.05■□□□□ 0.32
PKD1-222ENST00000496574 GORABQ5T7V8 394 aa17.05■□□□□ 0.32
PKD1-222ENST00000496574 WDR33Q9C0J8 1336 aaKnown RBP17.05■□□□□ 0.32
PKD1-222ENST00000496574 PCF11O94913 1555 aaKnown RBP17.05■□□□□ 0.32
PKD1-222ENST00000496574 PTPRGP23470 1445 aa17.05■□□□□ 0.32
PKD1-222ENST00000496574 MLECQ14165 292 aa17.05■□□□□ 0.32
PKD1-222ENST00000496574 SLC12A5Q9H2X9 1139 aa17.05■□□□□ 0.32
PKD1-222ENST00000496574 SUPT6HQ7KZ85 1726 aaKnown RBP17.04■□□□□ 0.32
PKD1-222ENST00000496574 SSFA2P28290 1259 aa17.04■□□□□ 0.32
PKD1-222ENST00000496574 CCDC112Q8NEF3 446 aa17.04■□□□□ 0.32
PKD1-222ENST00000496574 PDCL2Q8N4E4 241 aa17.03■□□□□ 0.32
PKD1-222ENST00000496574 PRDM10Q9NQV6 1147 aa17.03■□□□□ 0.32
PKD1-222ENST00000496574 IFIT2P09913 472 aaKnown RBP17.03■□□□□ 0.32
PKD1-222ENST00000496574 CCDC192P0DO97 292 aa17.03■□□□□ 0.32
PKD1-222ENST00000496574 CREBRFQ8IUR6 639 aa17.03■□□□□ 0.32
PKD1-222ENST00000496574 TWISTNBQ3B726 338 aaPredicted RBP17.03■□□□□ 0.32
PKD1-222ENST00000496574 TMEM57Q8N5G2 664 aa17.03■□□□□ 0.32
PKD1-222ENST00000496574 C9orf84Q5VXU9 1444 aa17.03■□□□□ 0.32
PKD1-222ENST00000496574 AQRO60306 1485 aaKnown RBP eCLIP17.02■□□□□ 0.317e-7■■■■■ 49.8
PKD1-222ENST00000496574 PRKAR2BP31323 418 aa17.02■□□□□ 0.31
PKD1-222ENST00000496574 NOC3LQ8WTT2 800 aaKnown RBP17.01■□□□□ 0.31
PKD1-222ENST00000496574 SETQ01105 290 aaPredicted RBP17.01■□□□□ 0.31
PKD1-222ENST00000496574 CABP2Q9NPB3 220 aa17.01■□□□□ 0.31
PKD1-222ENST00000496574 PTPN23Q9H3S7 1636 aa17.01■□□□□ 0.31
PKD1-222ENST00000496574 TULP1O00294 542 aaPredicted RBP17.01■□□□□ 0.31
PKD1-222ENST00000496574 PDCP20941 246 aa17.01■□□□□ 0.31
PKD1-222ENST00000496574 TMEM132EQ6IEE7 984 aa17.01■□□□□ 0.31
PKD1-222ENST00000496574 NECTIN2Q92692 538 aa17.01■□□□□ 0.31
PKD1-222ENST00000496574 FBXW7Q969H0 707 aa17.01■□□□□ 0.31
PKD1-222ENST00000496574 NESP48681 1621 aa17■□□□□ 0.31
PKD1-222ENST00000496574 CC2D2AQ9P2K1 1620 aa17■□□□□ 0.31
PKD1-222ENST00000496574 HSP90AB4PQ58FF6 505 aa17■□□□□ 0.31
PKD1-222ENST00000496574 TPM1P09493 284 aa16.99■□□□□ 0.31
PKD1-222ENST00000496574 MCM5P33992 734 aa16.99■□□□□ 0.31
PKD1-222ENST00000496574 KLHL40Q2TBA0 621 aa16.99■□□□□ 0.31
PKD1-222ENST00000496574 LTV1Q96GA3 475 aaPredicted RBP16.99■□□□□ 0.31
PKD1-222ENST00000496574 CBX1P83916 185 aa16.99■□□□□ 0.31
PKD1-222ENST00000496574 NAT10Q9H0A0 1025 aaKnown RBP16.99■□□□□ 0.31
PKD1-222ENST00000496574 C9orf78Q9NZ63 289 aaPredicted RBP16.99■□□□□ 0.31
PKD1-222ENST00000496574 SDF4Q9BRK5 362 aa16.99■□□□□ 0.31
PKD1-222ENST00000496574 HMGXB3Q12766 1538 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms