RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 QRICH2Q9H0J4 1663 aa30.58■■■□□ 2.49
C9orf3-222ENST00000496567 SLC24A1O60721 1099 aa30.57■■■□□ 2.48
C9orf3-222ENST00000496567 SBNO2Q9Y2G9 1366 aa30.56■■■□□ 2.48
C9orf3-222ENST00000496567 ADGRL3Q9HAR2 1447 aa30.55■■■□□ 2.48
C9orf3-222ENST00000496567 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.55■■■□□ 2.48
C9orf3-222ENST00000496567 MINK1Q8N4C8 1332 aaPredicted RBP30.54■■■□□ 2.48
C9orf3-222ENST00000496567 XIRP1Q702N8 1843 aaKnown RBP30.53■■■□□ 2.48
C9orf3-222ENST00000496567 C19orf44Q9H6X5 657 aa30.53■■■□□ 2.48
C9orf3-222ENST00000496567 NALCNQ8IZF0 1738 aa30.52■■■□□ 2.48
C9orf3-222ENST00000496567 MSH6P52701 1360 aa30.51■■■□□ 2.47
C9orf3-222ENST00000496567 TESK2Q96S53 571 aa30.5■■■□□ 2.47
C9orf3-222ENST00000496567 HIRIP3Q9BW71 556 aaPredicted RBP30.5■■■□□ 2.47
C9orf3-222ENST00000496567 ADGRB2O60241 1585 aa30.5■■■□□ 2.47
C9orf3-222ENST00000496567 EVC2Q86UK5 1308 aa30.47■■■□□ 2.47
C9orf3-222ENST00000496567 DCCP43146 1447 aa30.46■■■□□ 2.47
C9orf3-222ENST00000496567 CDC42BPGQ6DT37 1551 aa30.45■■■□□ 2.47
C9orf3-222ENST00000496567 WASLO00401 505 aaPredicted RBP30.45■■■□□ 2.46
C9orf3-222ENST00000496567 IQSEC2Q5JU85 1478 aa30.44■■■□□ 2.46
C9orf3-222ENST00000496567 ATF3P18847 181 aa30.44■■■□□ 2.46
C9orf3-222ENST00000496567 TMF1P82094 1093 aa30.44■■■□□ 2.46
C9orf3-222ENST00000496567 CADPS2Q86UW7 1296 aa30.43■■■□□ 2.46
C9orf3-222ENST00000496567 CERKQ8TCT0 537 aa30.43■■■□□ 2.46
C9orf3-222ENST00000496567 CDK19Q9BWU1 502 aa30.41■■■□□ 2.46
C9orf3-222ENST00000496567 TULP4Q9NRJ4 1543 aa30.4■■■□□ 2.46
C9orf3-222ENST00000496567 SRPK2P78362 688 aaKnown RBP30.38■■■□□ 2.45
C9orf3-222ENST00000496567 CDCA8Q53HL2 280 aa30.38■■■□□ 2.45
C9orf3-222ENST00000496567 FMN2Q9NZ56 1722 aa30.36■■■□□ 2.45
C9orf3-222ENST00000496567 DISP3Q9P2K9 1392 aa30.36■■■□□ 2.45
C9orf3-222ENST00000496567 PUS7Q96PZ0 661 aaKnown RBP30.35■■■□□ 2.45
C9orf3-222ENST00000496567 CABP2Q9NPB3 220 aa30.33■■■□□ 2.45
C9orf3-222ENST00000496567 ANKARQ7Z5J8 1434 aa30.32■■■□□ 2.44
C9orf3-222ENST00000496567 NUTM2FA1L443 756 aa30.31■■■□□ 2.44
C9orf3-222ENST00000496567 MST1RQ04912 1400 aa30.3■■■□□ 2.44
C9orf3-222ENST00000496567 ATAD2Q6PL18 1390 aa30.3■■■□□ 2.44
C9orf3-222ENST00000496567 TOM1O60784 492 aa30.29■■■□□ 2.44
C9orf3-222ENST00000496567 NUDT16Q96DE0 195 aaKnown RBP30.29■■■□□ 2.44
C9orf3-222ENST00000496567 SLAIN2Q9P270 581 aa30.28■■■□□ 2.44
C9orf3-222ENST00000496567 ATP7BP35670 1465 aa30.27■■■□□ 2.44
C9orf3-222ENST00000496567 C1orf167Q5SNV9 1468 aa30.27■■■□□ 2.44
C9orf3-222ENST00000496567 PRR36Q9H6K5 1346 aa30.26■■■□□ 2.44
C9orf3-222ENST00000496567 C11orf95C9JLR9 678 aaPredicted RBP30.26■■■□□ 2.43
C9orf3-222ENST00000496567 CCDC61Q9Y6R9 512 aa30.26■■■□□ 2.43
C9orf3-222ENST00000496567 USP32Q8NFA0 1604 aa30.25■■■□□ 2.43
C9orf3-222ENST00000496567 ITSN1Q15811 1721 aa30.23■■■□□ 2.43
C9orf3-222ENST00000496567 UBAP1LF5GYI3 381 aa30.23■■■□□ 2.43
C9orf3-222ENST00000496567 POLR3GLQ9BT43 218 aa30.23■■■□□ 2.43
C9orf3-222ENST00000496567 KIF7Q2M1P5 1343 aa30.22■■■□□ 2.43
C9orf3-222ENST00000496567 RGPD8O14715 1765 aaPredicted RBP30.21■■■□□ 2.43
C9orf3-222ENST00000496567 ESCO1Q5FWF5 840 aa30.21■■■□□ 2.43
C9orf3-222ENST00000496567 TOPAZ1Q8N9V7 1692 aa30.19■■■□□ 2.42
C9orf3-222ENST00000496567 CCDC7Q96M83 1385 aa30.19■■■□□ 2.42
C9orf3-222ENST00000496567 NINLQ9Y2I6 1382 aa30.19■■■□□ 2.42
C9orf3-222ENST00000496567 PPIP5K1Q6PFW1 1433 aa30.19■■■□□ 2.42
C9orf3-222ENST00000496567 ZNF316A6NFI3 1004 aaPredicted RBP30.19■■■□□ 2.42
C9orf3-222ENST00000496567 WASHC2AQ641Q2 1341 aa30.19■■■□□ 2.42
C9orf3-222ENST00000496567 ORAI2Q96SN7 254 aa30.18■■■□□ 2.42
C9orf3-222ENST00000496567 TMC1Q8TDI8 760 aa30.17■■■□□ 2.42
C9orf3-222ENST00000496567 CABP1Q9NZU7 370 aa30.17■■■□□ 2.42
C9orf3-222ENST00000496567 PHF8Q9UPP1 1060 aa30.17■■■□□ 2.42
C9orf3-222ENST00000496567 PLEKHG3A1L390 1219 aa30.16■■■□□ 2.42
C9orf3-222ENST00000496567 KIF1AQ12756 1690 aa30.14■■■□□ 2.42
C9orf3-222ENST00000496567 BRINP3Q76B58 766 aa30.14■■■□□ 2.42
C9orf3-222ENST00000496567 PMFBP1Q8TBY8 1022 aa30.13■■■□□ 2.41
C9orf3-222ENST00000496567 SLC12A5Q9H2X9 1139 aa30.12■■■□□ 2.41
C9orf3-222ENST00000496567 PIP4K2BP78356 416 aa30.11■■■□□ 2.41
C9orf3-222ENST00000496567 NGDNQ8NEJ9 315 aaKnown RBP30.11■■■□□ 2.41
C9orf3-222ENST00000496567 MYOM1P52179 1685 aa30.1■■■□□ 2.41
C9orf3-222ENST00000496567 ROBO1Q9Y6N7 1651 aa30.1■■■□□ 2.41
C9orf3-222ENST00000496567 SCAF1Q9H7N4 1312 aaKnown RBP30.09■■■□□ 2.41
C9orf3-222ENST00000496567 TERF2IPQ9NYB0 399 aa30.09■■■□□ 2.41
C9orf3-222ENST00000496567 ACEP12821 1306 aa30.08■■■□□ 2.41
C9orf3-222ENST00000496567 POLR3AO14802 1390 aaPredicted RBP30.08■■■□□ 2.41
C9orf3-222ENST00000496567 HDGFL2Q7Z4V5 671 aaPredicted RBP30.07■■■□□ 2.4
C9orf3-222ENST00000496567 ZNF692Q9BU19 519 aaPredicted RBP30.06■■■□□ 2.4
C9orf3-222ENST00000496567 NPHP3Q7Z494 1330 aa30.05■■■□□ 2.4
C9orf3-222ENST00000496567 FOXO3O43524 673 aa30.05■■■□□ 2.4
C9orf3-222ENST00000496567 ANKRD36BQ8N2N9 1353 aa30.04■■■□□ 2.4
C9orf3-222ENST00000496567 CPSF1Q10570 1443 aaKnown RBP30.04■■■□□ 2.4
C9orf3-222ENST00000496567 CD163L1Q9NR16 1453 aa30.03■■■□□ 2.4
C9orf3-222ENST00000496567 PSME1Q06323 249 aa30.03■■■□□ 2.4
C9orf3-222ENST00000496567 A0A1W2PP64 1363 aa30.01■■■□□ 2.39
C9orf3-222ENST00000496567 AKAP12Q02952 1782 aa30■■■□□ 2.39
C9orf3-222ENST00000496567 KTN1Q86UP2 1357 aaKnown RBP30■■■□□ 2.39
C9orf3-222ENST00000496567 NHSL1Q5SYE7 1610 aa29.99■■■□□ 2.39
C9orf3-222ENST00000496567 PANK3Q9H999 370 aa29.98■■■□□ 2.39
C9orf3-222ENST00000496567 KRT28Q7Z3Y7 464 aa29.98■■■□□ 2.39
C9orf3-222ENST00000496567 BRD4O60885 1362 aaPredicted RBP29.97■■■□□ 2.39
C9orf3-222ENST00000496567 AHDC1Q5TGY3 1603 aaPredicted RBP29.97■■■□□ 2.39
C9orf3-222ENST00000496567 USP6P35125 1406 aa29.97■■■□□ 2.39
C9orf3-222ENST00000496567 DDX17Q92841 729 aaKnown RBP29.97■■■□□ 2.39
C9orf3-222ENST00000496567 MON2Q7Z3U7 1717 aa29.95■■■□□ 2.38
C9orf3-222ENST00000496567 XPCQ01831 940 aaPredicted RBP29.94■■■□□ 2.38
C9orf3-222ENST00000496567 SOS2Q07890 1332 aaPredicted RBP29.94■■■□□ 2.38
C9orf3-222ENST00000496567 PXDNQ92626 1479 aa29.94■■■□□ 2.38
C9orf3-222ENST00000496567 EDC4Q6P2E9 1401 aaKnown RBP29.93■■■□□ 2.38
C9orf3-222ENST00000496567 DDX10Q13206 875 aaKnown RBP29.92■■■□□ 2.38
C9orf3-222ENST00000496567 FBXO41Q8TF61 875 aa29.9■■■□□ 2.38
C9orf3-222ENST00000496567 CARD14Q9BXL6 1004 aa29.9■■■□□ 2.38
C9orf3-222ENST00000496567 PHLPP1O60346 1717 aa29.9■■■□□ 2.38
C9orf3-222ENST00000496567 SBNO1A3KN83 1393 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms