RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 CRACR2AQ9BSW2 395 aa9.81□□□□□ -0.84
NPHP1-211ENST00000496524 UQCRHLA0A096LP55 91 aa9.81□□□□□ -0.84
NPHP1-211ENST00000496524 VPS37CA5D8V6 355 aaPredicted RBP9.81□□□□□ -0.84
NPHP1-211ENST00000496524 UQCRHP07919 91 aa9.81□□□□□ -0.84
NPHP1-211ENST00000496524 SSR1P43307 286 aaKnown RBP9.81□□□□□ -0.84
NPHP1-211ENST00000496524 PABPN1Q86U42 306 aaKnown RBP eCLIP9.81□□□□□ -0.84
NPHP1-211ENST00000496524 PRKCSHP14314 528 aaPredicted RBP9.8□□□□□ -0.84
NPHP1-211ENST00000496524 ANKRD18BA2A2Z9 1011 aa9.8□□□□□ -0.84
NPHP1-211ENST00000496524 SMC2O95347 1197 aa9.8□□□□□ -0.84
NPHP1-211ENST00000496524 BCCIPQ9P287 314 aaKnown RBP eCLIP9.8□□□□□ -0.84
NPHP1-211ENST00000496524 TMCO3Q6UWJ1 677 aa9.8□□□□□ -0.84
NPHP1-211ENST00000496524 CCDC192P0DO97 292 aa9.8□□□□□ -0.84
NPHP1-211ENST00000496524 PPFIBP1Q86W92 1011 aa9.8□□□□□ -0.84
NPHP1-211ENST00000496524 PDCL3Q9H2J4 239 aa9.8□□□□□ -0.84
NPHP1-211ENST00000496524 TERF2IPQ9NYB0 399 aa9.79□□□□□ -0.84
NPHP1-211ENST00000496524 FHAD1B1AJZ9 1412 aa9.79□□□□□ -0.84
NPHP1-211ENST00000496524 NFXL1Q6ZNB6 911 aa9.79□□□□□ -0.84
NPHP1-211ENST00000496524 RBM10P98175 930 aaKnown RBP9.79□□□□□ -0.84
NPHP1-211ENST00000496524 DAAM2Q86T65 1068 aa9.79□□□□□ -0.84
NPHP1-211ENST00000496524 SETSIPP0DME0 302 aa9.79□□□□□ -0.84
NPHP1-211ENST00000496524 STIM1Q13586 685 aa9.79□□□□□ -0.84
NPHP1-211ENST00000496524 JMYQ8N9B5 988 aa9.79□□□□□ -0.84
NPHP1-211ENST00000496524 HSP90AB4PQ58FF6 505 aa9.79□□□□□ -0.84
NPHP1-211ENST00000496524 ZNF330Q9Y3S2 320 aaPredicted RBP9.79□□□□□ -0.84
NPHP1-211ENST00000496524 CCDC102AQ96A19 550 aa9.78□□□□□ -0.84
NPHP1-211ENST00000496524 SIN3AQ96ST3 1273 aa9.78□□□□□ -0.84
NPHP1-211ENST00000496524 DNAJC2Q99543 621 aaKnown RBP9.78□□□□□ -0.84
NPHP1-211ENST00000496524 CFAP45Q9UL16 551 aa9.78□□□□□ -0.84
NPHP1-211ENST00000496524 CCNB3Q8WWL7 1395 aa9.78□□□□□ -0.84
NPHP1-211ENST00000496524 ERC2O15083 957 aa9.78□□□□□ -0.84
NPHP1-211ENST00000496524 HSPA5P11021 654 aaKnown RBP9.78□□□□□ -0.84
NPHP1-211ENST00000496524 KIAA1328Q86T90 577 aa9.78□□□□□ -0.84
NPHP1-211ENST00000496524 ZNF396Q96N95 335 aaPredicted RBP9.78□□□□□ -0.84
NPHP1-211ENST00000496524 CCDC175P0C221 793 aa9.78□□□□□ -0.84
NPHP1-211ENST00000496524 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
NPHP1-211ENST00000496524 FYB1O15117 783 aa9.78□□□□□ -0.84
NPHP1-211ENST00000496524 DHX16O60231 1041 aaKnown RBP9.78□□□□□ -0.84
NPHP1-211ENST00000496524 GTF2E1P29083 439 aaPredicted RBP9.78□□□□□ -0.84
NPHP1-211ENST00000496524 GPATCH11Q8N954 259 aa9.78□□□□□ -0.84
NPHP1-211ENST00000496524 CWC22Q9HCG8 908 aaKnown RBP9.78□□□□□ -0.84
NPHP1-211ENST00000496524 JAKMIP3Q5VZ66 844 aa9.77□□□□□ -0.84
NPHP1-211ENST00000496524 RALYLQ86SE5 291 aaKnown RBP9.77□□□□□ -0.84
NPHP1-211ENST00000496524 RRP1P56182 461 aaKnown RBP9.77□□□□□ -0.84
NPHP1-211ENST00000496524 SEPT6Q14141 434 aa9.77□□□□□ -0.84
NPHP1-211ENST00000496524 CCDC148Q8NFR7 591 aa9.77□□□□□ -0.84
NPHP1-211ENST00000496524 UBXN4Q92575 508 aa9.77□□□□□ -0.84
NPHP1-211ENST00000496524 GCOM1H8Y6P7 765 aaPredicted RBP9.77□□□□□ -0.85
NPHP1-211ENST00000496524 MYZAPP0CAP1 466 aa9.77□□□□□ -0.85
NPHP1-211ENST00000496524 PAF1Q8N7H5 531 aa9.77□□□□□ -0.85
NPHP1-211ENST00000496524 KIF15Q9NS87 1388 aa9.77□□□□□ -0.85
NPHP1-211ENST00000496524 TICAM2Q86XR7 235 aa9.77□□□□□ -0.85
NPHP1-211ENST00000496524 NINLQ9Y2I6 1382 aa9.77□□□□□ -0.85
NPHP1-211ENST00000496524 SLC4A3P48751 1232 aa9.77□□□□□ -0.85
NPHP1-211ENST00000496524 GIGYF2Q6Y7W6 1299 aaKnown RBP9.77□□□□□ -0.85
NPHP1-211ENST00000496524 FAM114A1Q8IWE2 563 aa9.77□□□□□ -0.85
NPHP1-211ENST00000496524 C22orf23Q9BZE7 217 aa9.77□□□□□ -0.85
NPHP1-211ENST00000496524 ZBED9Q6R2W3 1325 aa9.77□□□□□ -0.85
NPHP1-211ENST00000496524 IFIT2P09913 472 aaKnown RBP9.77□□□□□ -0.85
NPHP1-211ENST00000496524 SERPINC1P01008 464 aa9.76□□□□□ -0.85
NPHP1-211ENST00000496524 C6orf163Q5TEZ5 329 aa9.76□□□□□ -0.85
NPHP1-211ENST00000496524 ERICH4A6NGS2 130 aa9.76□□□□□ -0.85
NPHP1-211ENST00000496524 SMC1AQ14683 1233 aaKnown RBP9.76□□□□□ -0.85
NPHP1-211ENST00000496524 DDX23Q9BUQ8 820 aaKnown RBP9.76□□□□□ -0.85
NPHP1-211ENST00000496524 CGNQ9P2M7 1197 aaKnown RBP9.76□□□□□ -0.85
NPHP1-211ENST00000496524 SENP3Q9H4L4 574 aaPredicted RBP9.76□□□□□ -0.85
NPHP1-211ENST00000496524 CEP164Q9UPV0 1460 aa9.75□□□□□ -0.85
NPHP1-211ENST00000496524 SOX12O15370 315 aa9.75□□□□□ -0.85
NPHP1-211ENST00000496524 SETD5Q9C0A6 1442 aa9.75□□□□□ -0.85
NPHP1-211ENST00000496524 KCNH8Q96L42 1107 aa9.75□□□□□ -0.85
NPHP1-211ENST00000496524 CSB-PGBD3P0DP91 1061 aa9.75□□□□□ -0.85
NPHP1-211ENST00000496524 IMMTQ16891 758 aaKnown RBP9.75□□□□□ -0.85
NPHP1-211ENST00000496524 CTR9Q6PD62 1173 aa9.75□□□□□ -0.85
NPHP1-211ENST00000496524 CETN2P41208 172 aa9.75□□□□□ -0.85
NPHP1-211ENST00000496524 SPECC1LQ69YQ0 1117 aa9.74□□□□□ -0.85
NPHP1-211ENST00000496524 WDR66Q8TBY9 1149 aa9.74□□□□□ -0.85
NPHP1-211ENST00000496524 LRRFIP2Q9Y608 721 aaKnown RBP9.74□□□□□ -0.85
NPHP1-211ENST00000496524 DDX46Q7L014 1031 aaKnown RBP9.74□□□□□ -0.85
NPHP1-211ENST00000496524 CDK5RAP3Q96JB5 506 aa9.74□□□□□ -0.85
NPHP1-211ENST00000496524 GTF2A1P52655 376 aaPredicted RBP9.74□□□□□ -0.85
NPHP1-211ENST00000496524 MYBBP1AQ9BQG0 1328 aaKnown RBP9.74□□□□□ -0.85
NPHP1-211ENST00000496524 SART3Q15020 963 aaKnown RBP9.74□□□□□ -0.85
NPHP1-211ENST00000496524 FILIP1Q7Z7B0 1213 aa9.74□□□□□ -0.85
NPHP1-211ENST00000496524 POTEB2H3BUK9 544 aa9.73□□□□□ -0.85
NPHP1-211ENST00000496524 HIP1O00291 1037 aa9.73□□□□□ -0.85
NPHP1-211ENST00000496524 HMGB1P09429 215 aaKnown RBP9.73□□□□□ -0.85
NPHP1-211ENST00000496524 AEBP1Q8IUX7 1158 aa9.73□□□□□ -0.85
NPHP1-211ENST00000496524 TIGD1Q96MW7 591 aa9.73□□□□□ -0.85
NPHP1-211ENST00000496524 RNF214Q8ND24 703 aa9.73□□□□□ -0.85
NPHP1-211ENST00000496524 BMS1Q14692 1282 aaKnown RBP9.73□□□□□ -0.85
NPHP1-211ENST00000496524 TNIKQ9UKE5 1360 aa9.73□□□□□ -0.85
NPHP1-211ENST00000496524 SMTNL1A8MU46 457 aa9.73□□□□□ -0.85
NPHP1-211ENST00000496524 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
NPHP1-211ENST00000496524 C9orf78Q9NZ63 289 aaPredicted RBP9.73□□□□□ -0.85
NPHP1-211ENST00000496524 IRX3P78415 501 aaPredicted RBP9.73□□□□□ -0.85
NPHP1-211ENST00000496524 ZNF397Q8NF99 534 aaPredicted RBP9.73□□□□□ -0.85
NPHP1-211ENST00000496524 API5Q9BZZ5 524 aaKnown RBP9.73□□□□□ -0.85
NPHP1-211ENST00000496524 ESPNB1AK53 854 aa9.72□□□□□ -0.85
NPHP1-211ENST00000496524 ZSCAN12O43309 604 aa9.72□□□□□ -0.85
NPHP1-211ENST00000496524 DDX58O95786 925 aaKnown RBP9.72□□□□□ -0.85
NPHP1-211ENST00000496524 DZIP1LQ8IYY4 767 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms