RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 FRAT1Q92837 279 aaPredicted RBP16.13■□□□□ 0.17
PDE6B-212ENST00000496514 IFT172Q9UG01 1749 aa16.12■□□□□ 0.17
PDE6B-212ENST00000496514 U2AF1L5P0DN76 240 aaPredicted RBP16.12■□□□□ 0.17
PDE6B-212ENST00000496514 U2AF1Q01081 240 aaKnown RBP eCLIP16.12■□□□□ 0.17
PDE6B-212ENST00000496514 CAMSAP1Q5T5Y3 1602 aa16.12■□□□□ 0.17
PDE6B-212ENST00000496514 NRXN1Q9ULB1 1477 aa16.12■□□□□ 0.17
PDE6B-212ENST00000496514 ZNF521Q96K83 1311 aa16.12■□□□□ 0.17
PDE6B-212ENST00000496514 NBR1Q14596 966 aa16.11■□□□□ 0.17
PDE6B-212ENST00000496514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.11■□□□□ 0.17
PDE6B-212ENST00000496514 ADGRB1O14514 1584 aa16.11■□□□□ 0.17
PDE6B-212ENST00000496514 NEO1Q92859 1461 aa16.11■□□□□ 0.17
PDE6B-212ENST00000496514 TNNQ9UQP3 1299 aa16.11■□□□□ 0.17
PDE6B-212ENST00000496514 TCP11L2Q8N4U5 519 aa16.1■□□□□ 0.17
PDE6B-212ENST00000496514 PPLO60437 1756 aa16.1■□□□□ 0.17
PDE6B-212ENST00000496514 QRICH2Q9H0J4 1663 aa16.1■□□□□ 0.17
PDE6B-212ENST00000496514 RGS3P49796 1198 aa16.09■□□□□ 0.17
PDE6B-212ENST00000496514 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.09■□□□□ 0.17
PDE6B-212ENST00000496514 CGNL1Q0VF96 1302 aa16.09■□□□□ 0.17
PDE6B-212ENST00000496514 RPGRIP1LQ68CZ1 1315 aa16.09■□□□□ 0.17
PDE6B-212ENST00000496514 CFAP74Q9C0B2 1584 aa16.09■□□□□ 0.17
PDE6B-212ENST00000496514 CANXP27824 592 aaKnown RBP16.09■□□□□ 0.17
PDE6B-212ENST00000496514 WWC1Q8IX03 1113 aa16.09■□□□□ 0.17
PDE6B-212ENST00000496514 KIAA1210Q9ULL0 1709 aa16.09■□□□□ 0.17
PDE6B-212ENST00000496514 NUTM2FA1L443 756 aa16.08■□□□□ 0.17
PDE6B-212ENST00000496514 NCKAP5LQ9HCH0 1330 aa16.08■□□□□ 0.16
PDE6B-212ENST00000496514 PANK1Q8TE04 598 aa16.08■□□□□ 0.16
PDE6B-212ENST00000496514 MYO5BQ9ULV0 1848 aa16.08■□□□□ 0.16
PDE6B-212ENST00000496514 GLI2P10070 1586 aa16.07■□□□□ 0.16
PDE6B-212ENST00000496514 CLUAP1Q96AJ1 413 aa16.07■□□□□ 0.16
PDE6B-212ENST00000496514 SLC52A1Q9NWF4 448 aa16.07■□□□□ 0.16
PDE6B-212ENST00000496514 CABP1Q9NZU7 370 aa16.07■□□□□ 0.16
PDE6B-212ENST00000496514 NEXMIFQ5QGS0 1516 aa16.06■□□□□ 0.16
PDE6B-212ENST00000496514 PDE4AP27815 886 aa16.06■□□□□ 0.16
PDE6B-212ENST00000496514 COG6Q9Y2V7 657 aa16.06■□□□□ 0.16
PDE6B-212ENST00000496514 TULP4Q9NRJ4 1543 aa16.06■□□□□ 0.16
PDE6B-212ENST00000496514 A0A1W2PP64 1363 aa16.06■□□□□ 0.16
PDE6B-212ENST00000496514 RICTORQ6R327 1708 aa16.05■□□□□ 0.16
PDE6B-212ENST00000496514 NPC1L1Q9UHC9 1359 aa16.05■□□□□ 0.16
PDE6B-212ENST00000496514 ANP32AP39687 249 aaKnown RBP16.05■□□□□ 0.16
PDE6B-212ENST00000496514 CDK19Q9BWU1 502 aa16.05■□□□□ 0.16
PDE6B-212ENST00000496514 PIK3C2BO00750 1634 aa16.04■□□□□ 0.16
PDE6B-212ENST00000496514 TSR2Q969E8 191 aaKnown RBP16.04■□□□□ 0.16
PDE6B-212ENST00000496514 SBNO2Q9Y2G9 1366 aa16.03■□□□□ 0.16
PDE6B-212ENST00000496514 E9PSI1 815 aa16.03■□□□□ 0.16
PDE6B-212ENST00000496514 TXNDC2Q86VQ3 553 aa16.03■□□□□ 0.16
PDE6B-212ENST00000496514 UBE2Q2Q8WVN8 375 aa16.03■□□□□ 0.16
PDE6B-212ENST00000496514 NOP58Q9Y2X3 529 aaKnown RBP16.03■□□□□ 0.16
PDE6B-212ENST00000496514 RUNDC1Q96C34 613 aa16.02■□□□□ 0.16
PDE6B-212ENST00000496514 CFAP53Q96M91 514 aa16.02■□□□□ 0.16
PDE6B-212ENST00000496514 ESF1Q9H501 851 aaKnown RBP16.02■□□□□ 0.16
PDE6B-212ENST00000496514 ZRANB1Q9UGI0 708 aa16.02■□□□□ 0.16
PDE6B-212ENST00000496514 RIMBP3CA6NJZ7 1639 aa16.02■□□□□ 0.15
PDE6B-212ENST00000496514 RIMBP3BA6NNM3 1639 aa16.02■□□□□ 0.15
PDE6B-212ENST00000496514 RIMBP3Q9UFD9 1639 aa16.02■□□□□ 0.15
PDE6B-212ENST00000496514 FYB1O15117 783 aa16.01■□□□□ 0.15
PDE6B-212ENST00000496514 POLR3AO14802 1390 aaPredicted RBP16.01■□□□□ 0.15
PDE6B-212ENST00000496514 SETBP1Q9Y6X0 1596 aa16.01■□□□□ 0.15
PDE6B-212ENST00000496514 ANKRD36BQ8N2N9 1353 aa16■□□□□ 0.15
PDE6B-212ENST00000496514 CEBPAP49715 358 aaPredicted RBP16■□□□□ 0.15
PDE6B-212ENST00000496514 GOLGA6L2Q8N9W4 650 aaPredicted RBP16■□□□□ 0.15
PDE6B-212ENST00000496514 NEURL4Q96JN8 1562 aa15.99■□□□□ 0.15
PDE6B-212ENST00000496514 TRMT2AQ8IZ69 625 aaKnown RBP15.99■□□□□ 0.15
PDE6B-212ENST00000496514 NKTRP30414 1462 aaKnown RBP15.99■□□□□ 0.15
PDE6B-212ENST00000496514 YTHDC2Q9H6S0 1430 aaKnown RBP15.99■□□□□ 0.15
PDE6B-212ENST00000496514 TCERG1O14776 1098 aaKnown RBP15.99■□□□□ 0.15
PDE6B-212ENST00000496514 SOX12O15370 315 aa15.98■□□□□ 0.15
PDE6B-212ENST00000496514 SLC4A3P48751 1232 aa15.98■□□□□ 0.15
PDE6B-212ENST00000496514 MYO3AQ8NEV4 1616 aa15.98■□□□□ 0.15
PDE6B-212ENST00000496514 IGHDP01880 384 aa15.98■□□□□ 0.15
PDE6B-212ENST00000496514 ARHGEF28Q8N1W1 1705 aaKnown RBP15.98■□□□□ 0.15
PDE6B-212ENST00000496514 LAS1LQ9Y4W2 734 aaKnown RBP15.97■□□□□ 0.15
PDE6B-212ENST00000496514 INSRP06213 1382 aa15.97■□□□□ 0.15
PDE6B-212ENST00000496514 HMOX1P09601 288 aa15.97■□□□□ 0.15
PDE6B-212ENST00000496514 RLBP1P12271 317 aa15.97■□□□□ 0.15
PDE6B-212ENST00000496514 BACH2Q9BYV9 841 aa15.97■□□□□ 0.15
PDE6B-212ENST00000496514 ZBTB47Q9UFB7 747 aaPredicted RBP15.97■□□□□ 0.15
PDE6B-212ENST00000496514 IPO9Q96P70 1041 aaKnown RBP15.96■□□□□ 0.15
PDE6B-212ENST00000496514 PREX1Q8TCU6 1659 aa15.96■□□□□ 0.15
PDE6B-212ENST00000496514 TERF2IPQ9NYB0 399 aa15.96■□□□□ 0.14
PDE6B-212ENST00000496514 ZC3H13Q5T200 1668 aaKnown RBP15.95■□□□□ 0.14
PDE6B-212ENST00000496514 ARHGAP31Q2M1Z3 1444 aa15.95■□□□□ 0.14
PDE6B-212ENST00000496514 HDGFL2Q7Z4V5 671 aaPredicted RBP15.94■□□□□ 0.14
PDE6B-212ENST00000496514 THUMPD2Q9BTF0 503 aaKnown RBP15.94■□□□□ 0.14
PDE6B-212ENST00000496514 PTPRMP28827 1452 aa15.94■□□□□ 0.14
PDE6B-212ENST00000496514 TMEM131LA2VDJ0 1609 aa15.94■□□□□ 0.14
PDE6B-212ENST00000496514 NME9Q86XW9 330 aa15.94■□□□□ 0.14
PDE6B-212ENST00000496514 RTN4Q9NQC3 1192 aaKnown RBP15.94■□□□□ 0.14
PDE6B-212ENST00000496514 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
PDE6B-212ENST00000496514 DIP2BQ9P265 1576 aa15.94■□□□□ 0.14
PDE6B-212ENST00000496514 EMILIN1Q9Y6C2 1016 aa15.93■□□□□ 0.14
PDE6B-212ENST00000496514 RARSP54136 660 aaKnown RBP15.93■□□□□ 0.14
PDE6B-212ENST00000496514 CLTCQ00610 1675 aaKnown RBP15.92■□□□□ 0.14
PDE6B-212ENST00000496514 MAPK8IP3Q9UPT6 1336 aa15.92■□□□□ 0.14
PDE6B-212ENST00000496514 RRS1Q15050 365 aaKnown RBP15.92■□□□□ 0.14
PDE6B-212ENST00000496514 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
PDE6B-212ENST00000496514 RIMS2Q9UQ26 1411 aa15.91■□□□□ 0.14
PDE6B-212ENST00000496514 METP08581 1390 aa15.91■□□□□ 0.14
PDE6B-212ENST00000496514 EXOSC9Q06265 439 aaKnown RBP15.91■□□□□ 0.14
PDE6B-212ENST00000496514 CENPQQ7L2Z9 268 aaPredicted RBP15.91■□□□□ 0.14
PDE6B-212ENST00000496514 RIPK4P57078 832 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms