RNA–Protein interactions for RNA: ENST00000496015.5

ABCD4-217, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 1,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-217ENST00000496015 NUTM2BA6NNL0 878 aaPredicted RBP19.97■□□□□ 0.79
ABCD4-217ENST00000496015 NUTM2EB1AL46 878 aaPredicted RBP19.97■□□□□ 0.79
ABCD4-217ENST00000496015 POTEAQ6S8J7 498 aa19.97■□□□□ 0.79
ABCD4-217ENST00000496015 WAPLQ7Z5K2 1190 aa19.97■□□□□ 0.79
ABCD4-217ENST00000496015 NUTM2AQ8IVF1 878 aaPredicted RBP19.97■□□□□ 0.79
ABCD4-217ENST00000496015 LRP6O75581 1613 aa19.97■□□□□ 0.79
ABCD4-217ENST00000496015 NRXN1Q9ULB1 1477 aa19.97■□□□□ 0.79
ABCD4-217ENST00000496015 DDX17Q92841 729 aaKnown RBP19.96■□□□□ 0.79
ABCD4-217ENST00000496015 SIRT1Q96EB6 747 aa19.96■□□□□ 0.79
ABCD4-217ENST00000496015 ORAI2Q96SN7 254 aa19.96■□□□□ 0.79
ABCD4-217ENST00000496015 CFAP70Q5T0N1 1121 aa19.95■□□□□ 0.78
ABCD4-217ENST00000496015 ZNF772Q68DY9 489 aaPredicted RBP19.95■□□□□ 0.78
ABCD4-217ENST00000496015 STAC3Q96MF2 364 aa19.95■□□□□ 0.78
ABCD4-217ENST00000496015 ESCO1Q5FWF5 840 aa19.94■□□□□ 0.78
ABCD4-217ENST00000496015 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
ABCD4-217ENST00000496015 KDM2AQ9Y2K7 1162 aa19.91■□□□□ 0.78
ABCD4-217ENST00000496015 SOS2Q07890 1332 aaPredicted RBP19.91■□□□□ 0.78
ABCD4-217ENST00000496015 NPHP3Q7Z494 1330 aa19.91■□□□□ 0.78
ABCD4-217ENST00000496015 PNPLA6Q8IY17 1366 aa19.91■□□□□ 0.78
ABCD4-217ENST00000496015 PLEKHH1Q9ULM0 1364 aa19.9■□□□□ 0.78
ABCD4-217ENST00000496015 FMN2Q9NZ56 1722 aa19.88■□□□□ 0.77
ABCD4-217ENST00000496015 NUTM2FA1L443 756 aa19.88■□□□□ 0.77
ABCD4-217ENST00000496015 POGKQ9P215 609 aa19.88■□□□□ 0.77
ABCD4-217ENST00000496015 PRAM1Q96QH2 718 aa19.87■□□□□ 0.77
ABCD4-217ENST00000496015 FOXO3O43524 673 aa19.86■□□□□ 0.77
ABCD4-217ENST00000496015 DLC1Q96QB1 1528 aa19.86■□□□□ 0.77
ABCD4-217ENST00000496015 C8orf37Q96NL8 207 aa19.85■□□□□ 0.77
ABCD4-217ENST00000496015 KIF1AQ12756 1690 aa19.84■□□□□ 0.77
ABCD4-217ENST00000496015 AFF2P51816 1311 aa19.84■□□□□ 0.77
ABCD4-217ENST00000496015 SAFB2Q14151 953 aaKnown RBP eCLIP19.84■□□□□ 0.77
ABCD4-217ENST00000496015 ADGRB1O14514 1584 aa19.83■□□□□ 0.76
ABCD4-217ENST00000496015 ADAMTS2O95450 1211 aa19.82■□□□□ 0.76
ABCD4-217ENST00000496015 RXRBP28702 533 aa19.82■□□□□ 0.76
ABCD4-217ENST00000496015 NGLY1Q96IV0 654 aa19.82■□□□□ 0.76
ABCD4-217ENST00000496015 TRAK1Q9UPV9 953 aa19.82■□□□□ 0.76
ABCD4-217ENST00000496015 RGPD8O14715 1765 aaPredicted RBP19.82■□□□□ 0.76
ABCD4-217ENST00000496015 PXDNQ92626 1479 aa19.81■□□□□ 0.76
ABCD4-217ENST00000496015 COL22A1Q8NFW1 1626 aaPredicted RBP19.81■□□□□ 0.76
ABCD4-217ENST00000496015 XPCQ01831 940 aaPredicted RBP19.81■□□□□ 0.76
ABCD4-217ENST00000496015 PHF8Q9UPP1 1060 aa19.79■□□□□ 0.76
ABCD4-217ENST00000496015 PSME1Q06323 249 aa19.78■□□□□ 0.76
ABCD4-217ENST00000496015 EIF3AQ14152 1382 aaKnown RBP19.77■□□□□ 0.76
ABCD4-217ENST00000496015 ADGRB2O60241 1585 aa19.76■□□□□ 0.75
ABCD4-217ENST00000496015 KRT28Q7Z3Y7 464 aa19.76■□□□□ 0.75
ABCD4-217ENST00000496015 QTRT2Q9H974 415 aaKnown RBP19.76■□□□□ 0.75
ABCD4-217ENST00000496015 ANKARQ7Z5J8 1434 aa19.76■□□□□ 0.75
ABCD4-217ENST00000496015 MINK1Q8N4C8 1332 aaPredicted RBP19.75■□□□□ 0.75
ABCD4-217ENST00000496015 CDK12Q9NYV4 1490 aaPredicted RBP19.74■□□□□ 0.75
ABCD4-217ENST00000496015 KIAA1210Q9ULL0 1709 aa19.74■□□□□ 0.75
ABCD4-217ENST00000496015 HIRIP3Q9BW71 556 aaPredicted RBP19.74■□□□□ 0.75
ABCD4-217ENST00000496015 SPATA31A3Q5VYP0 1347 aa19.74■□□□□ 0.75
ABCD4-217ENST00000496015 MARF1Q9Y4F3 1742 aaKnown RBP19.73■□□□□ 0.75
ABCD4-217ENST00000496015 RBM6P78332 1123 aaKnown RBP19.73■□□□□ 0.75
ABCD4-217ENST00000496015 USP21Q9UK80 565 aa19.73■□□□□ 0.75
ABCD4-217ENST00000496015 ARHGEF28Q8N1W1 1705 aaKnown RBP19.71■□□□□ 0.75
ABCD4-217ENST00000496015 FNBP4Q8N3X1 1017 aaPredicted RBP19.71■□□□□ 0.75
ABCD4-217ENST00000496015 WASLO00401 505 aaPredicted RBP19.7■□□□□ 0.74
ABCD4-217ENST00000496015 HAP1P54257 671 aaPredicted RBP19.7■□□□□ 0.74
ABCD4-217ENST00000496015 TRPC5Q9UL62 973 aaPredicted RBP19.7■□□□□ 0.74
ABCD4-217ENST00000496015 USP32Q8NFA0 1604 aa19.69■□□□□ 0.74
ABCD4-217ENST00000496015 PMFBP1Q8TBY8 1022 aa19.69■□□□□ 0.74
ABCD4-217ENST00000496015 SBNO1A3KN83 1393 aa19.69■□□□□ 0.74
ABCD4-217ENST00000496015 TNS3Q68CZ2 1445 aa19.68■□□□□ 0.74
ABCD4-217ENST00000496015 TULP4Q9NRJ4 1543 aa19.68■□□□□ 0.74
ABCD4-217ENST00000496015 LMOD2Q6P5Q4 547 aa19.68■□□□□ 0.74
ABCD4-217ENST00000496015 ARHGEF10O15013 1369 aa19.68■□□□□ 0.74
ABCD4-217ENST00000496015 GPRASP1Q5JY77 1395 aa19.68■□□□□ 0.74
ABCD4-217ENST00000496015 ITSN1Q15811 1721 aa19.65■□□□□ 0.74
ABCD4-217ENST00000496015 NGDNQ8NEJ9 315 aaKnown RBP19.64■□□□□ 0.73
ABCD4-217ENST00000496015 PRR36Q9H6K5 1346 aa19.63■□□□□ 0.73
ABCD4-217ENST00000496015 RGS12O14924 1447 aa19.62■□□□□ 0.73
ABCD4-217ENST00000496015 ATRNO75882 1429 aa19.62■□□□□ 0.73
ABCD4-217ENST00000496015 NBPF1Q3BBV0 1214 aa19.62■□□□□ 0.73
ABCD4-217ENST00000496015 L3MBTL2Q969R5 705 aa19.62■□□□□ 0.73
ABCD4-217ENST00000496015 BCL9LQ86UU0 1499 aa19.61■□□□□ 0.73
ABCD4-217ENST00000496015 PLEKHG5O94827 1062 aa19.61■□□□□ 0.73
ABCD4-217ENST00000496015 NEUROD1Q13562 356 aa19.61■□□□□ 0.73
ABCD4-217ENST00000496015 UPF1Q92900 1129 aaKnown RBP eCLIP19.61■□□□□ 0.73
ABCD4-217ENST00000496015 NUDT16Q96DE0 195 aaKnown RBP19.61■□□□□ 0.73
ABCD4-217ENST00000496015 CDK19Q9BWU1 502 aa19.61■□□□□ 0.73
ABCD4-217ENST00000496015 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.6■□□□□ 0.73
ABCD4-217ENST00000496015 CABLES1Q8TDN4 633 aa19.6■□□□□ 0.73
ABCD4-217ENST00000496015 SIN3AQ96ST3 1273 aa19.6■□□□□ 0.73
ABCD4-217ENST00000496015 TRPM3Q9HCF6 1732 aaPredicted RBP19.59■□□□□ 0.73
ABCD4-217ENST00000496015 UNC5CLQ8IV45 518 aa19.59■□□□□ 0.73
ABCD4-217ENST00000496015 PAK3O75914 559 aaPredicted RBP19.58■□□□□ 0.72
ABCD4-217ENST00000496015 ABCA3Q99758 1704 aa19.58■□□□□ 0.72
ABCD4-217ENST00000496015 CENPJQ9HC77 1338 aaPredicted RBP19.57■□□□□ 0.72
ABCD4-217ENST00000496015 ATP7BP35670 1465 aa19.57■□□□□ 0.72
ABCD4-217ENST00000496015 GJD4Q96KN9 370 aaPredicted RBP19.57■□□□□ 0.72
ABCD4-217ENST00000496015 CCDC61Q9Y6R9 512 aa19.57■□□□□ 0.72
ABCD4-217ENST00000496015 SLIT2O94813 1529 aa19.56■□□□□ 0.72
ABCD4-217ENST00000496015 ALS2Q96Q42 1657 aa19.56■□□□□ 0.72
ABCD4-217ENST00000496015 NWD2Q9ULI1 1742 aa19.55■□□□□ 0.72
ABCD4-217ENST00000496015 ATAD2Q6PL18 1390 aa19.55■□□□□ 0.72
ABCD4-217ENST00000496015 SRPK2P78362 688 aaKnown RBP19.54■□□□□ 0.72
ABCD4-217ENST00000496015 PLCH1Q4KWH8 1693 aa19.53■□□□□ 0.72
ABCD4-217ENST00000496015 QRICH2Q9H0J4 1663 aa19.53■□□□□ 0.72
ABCD4-217ENST00000496015 TRPM1Q7Z4N2 1603 aa19.53■□□□□ 0.72
ABCD4-217ENST00000496015 TOPAZ1Q8N9V7 1692 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms