RNA–Protein interactions for RNA: ENST00000495998.1

SMO-204, Transcript of smoothened, frizzled class receptor, humanhuman

TSL 3

Gene SMO, Length 732 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMO-204ENST00000495998 PRAM1Q96QH2 718 aa19.02■□□□□ 0.64
SMO-204ENST00000495998 TRAK1Q9UPV9 953 aa19.02■□□□□ 0.64
SMO-204ENST00000495998 BRINP3Q76B58 766 aa19.01■□□□□ 0.63
SMO-204ENST00000495998 C1orf167Q5SNV9 1468 aa19.01■□□□□ 0.63
SMO-204ENST00000495998 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
SMO-204ENST00000495998 TONSLQ96HA7 1378 aa19■□□□□ 0.63
SMO-204ENST00000495998 ARHGEF28Q8N1W1 1705 aaKnown RBP18.99■□□□□ 0.63
SMO-204ENST00000495998 TRPM1Q7Z4N2 1603 aa18.99■□□□□ 0.63
SMO-204ENST00000495998 POGKQ9P215 609 aa18.98■□□□□ 0.63
SMO-204ENST00000495998 AHDC1Q5TGY3 1603 aaPredicted RBP18.98■□□□□ 0.63
SMO-204ENST00000495998 ADGRB2O60241 1585 aa18.97■□□□□ 0.63
SMO-204ENST00000495998 SAFB2Q14151 953 aaKnown RBP eCLIP18.96■□□□□ 0.63
SMO-204ENST00000495998 NBPF8Q3BBV2 869 aa18.96■□□□□ 0.63
SMO-204ENST00000495998 PHLPP1O60346 1717 aa18.96■□□□□ 0.63
SMO-204ENST00000495998 FMN2Q9NZ56 1722 aa18.96■□□□□ 0.63
SMO-204ENST00000495998 COL16A1Q07092 1604 aaPredicted RBP18.94■□□□□ 0.62
SMO-204ENST00000495998 NHSL1Q5SYE7 1610 aa18.94■□□□□ 0.62
SMO-204ENST00000495998 ORAI2Q96SN7 254 aa18.93■□□□□ 0.62
SMO-204ENST00000495998 ROCK2O75116 1388 aaKnown RBP18.92■□□□□ 0.62
SMO-204ENST00000495998 GPRASP1Q5JY77 1395 aa18.92■□□□□ 0.62
SMO-204ENST00000495998 MINK1Q8N4C8 1332 aaPredicted RBP18.9■□□□□ 0.62
SMO-204ENST00000495998 RALGAPBQ86X10 1494 aa18.9■□□□□ 0.62
SMO-204ENST00000495998 HIRIP3Q9BW71 556 aaPredicted RBP18.89■□□□□ 0.61
SMO-204ENST00000495998 TIMELESSQ9UNS1 1208 aa18.89■□□□□ 0.61
SMO-204ENST00000495998 NUTM2FA1L443 756 aa18.88■□□□□ 0.61
SMO-204ENST00000495998 ESCO1Q5FWF5 840 aa18.88■□□□□ 0.61
SMO-204ENST00000495998 ANKARQ7Z5J8 1434 aa18.88■□□□□ 0.61
SMO-204ENST00000495998 WASLO00401 505 aaPredicted RBP18.87■□□□□ 0.61
SMO-204ENST00000495998 USP32Q8NFA0 1604 aa18.87■□□□□ 0.61
SMO-204ENST00000495998 CCER1Q8TC90 406 aaPredicted RBP18.87■□□□□ 0.61
SMO-204ENST00000495998 DDX17Q92841 729 aaKnown RBP18.87■□□□□ 0.61
SMO-204ENST00000495998 JCADQ9P266 1359 aa18.87■□□□□ 0.61
SMO-204ENST00000495998 CENPJQ9HC77 1338 aaPredicted RBP18.86■□□□□ 0.61
SMO-204ENST00000495998 RGPD8O14715 1765 aaPredicted RBP18.86■□□□□ 0.61
SMO-204ENST00000495998 TULP4Q9NRJ4 1543 aa18.85■□□□□ 0.61
SMO-204ENST00000495998 EIF3AQ14152 1382 aaKnown RBP18.85■□□□□ 0.61
SMO-204ENST00000495998 SOS2Q07890 1332 aaPredicted RBP18.85■□□□□ 0.61
SMO-204ENST00000495998 MED1Q15648 1581 aaPredicted RBP18.85■□□□□ 0.61
SMO-204ENST00000495998 KIF1AQ12756 1690 aa18.84■□□□□ 0.61
SMO-204ENST00000495998 SHPRHQ149N8 1683 aa18.83■□□□□ 0.61
SMO-204ENST00000495998 NPHP3Q7Z494 1330 aa18.83■□□□□ 0.61
SMO-204ENST00000495998 PRR36Q9H6K5 1346 aa18.83■□□□□ 0.61
SMO-204ENST00000495998 LRRC59Q96AG4 307 aaKnown RBP18.83■□□□□ 0.6
SMO-204ENST00000495998 QRICH2Q9H0J4 1663 aa18.82■□□□□ 0.6
SMO-204ENST00000495998 CARD11Q9BXL7 1154 aa18.82■□□□□ 0.6
SMO-204ENST00000495998 PHF8Q9UPP1 1060 aa18.82■□□□□ 0.6
SMO-204ENST00000495998 PXDNQ92626 1479 aa18.82■□□□□ 0.6
SMO-204ENST00000495998 FOXO3O43524 673 aa18.81■□□□□ 0.6
SMO-204ENST00000495998 CDK19Q9BWU1 502 aa18.81■□□□□ 0.6
SMO-204ENST00000495998 ATP7BP35670 1465 aa18.8■□□□□ 0.6
SMO-204ENST00000495998 SPATA31A6Q5VVP1 1343 aa18.79■□□□□ 0.6
SMO-204ENST00000495998 NUDT16Q96DE0 195 aaKnown RBP18.78■□□□□ 0.6
SMO-204ENST00000495998 PNPLA6Q8IY17 1366 aa18.78■□□□□ 0.6
SMO-204ENST00000495998 DISP3Q9P2K9 1392 aa18.78■□□□□ 0.6
SMO-204ENST00000495998 SBNO2Q9Y2G9 1366 aa18.77■□□□□ 0.6
SMO-204ENST00000495998 ITSN1Q15811 1721 aa18.76■□□□□ 0.59
SMO-204ENST00000495998 XPCQ01831 940 aaPredicted RBP18.75■□□□□ 0.59
SMO-204ENST00000495998 PMFBP1Q8TBY8 1022 aa18.75■□□□□ 0.59
SMO-204ENST00000495998 TOPAZ1Q8N9V7 1692 aa18.75■□□□□ 0.59
SMO-204ENST00000495998 LRP6O75581 1613 aa18.74■□□□□ 0.59
SMO-204ENST00000495998 KRT28Q7Z3Y7 464 aa18.74■□□□□ 0.59
SMO-204ENST00000495998 CCDC61Q9Y6R9 512 aa18.74■□□□□ 0.59
SMO-204ENST00000495998 EVC2Q86UK5 1308 aa18.74■□□□□ 0.59
SMO-204ENST00000495998 COL22A1Q8NFW1 1626 aaPredicted RBP18.73■□□□□ 0.59
SMO-204ENST00000495998 SPATA31A3Q5VYP0 1347 aa18.73■□□□□ 0.59
SMO-204ENST00000495998 SBNO1A3KN83 1393 aa18.72■□□□□ 0.59
SMO-204ENST00000495998 SRPK2P78362 688 aaKnown RBP18.72■□□□□ 0.59
SMO-204ENST00000495998 CABP2Q9NPB3 220 aa18.72■□□□□ 0.59
SMO-204ENST00000495998 PLEKHG3A1L390 1219 aa18.71■□□□□ 0.59
SMO-204ENST00000495998 PSME1Q06323 249 aa18.71■□□□□ 0.59
SMO-204ENST00000495998 POLR3AO14802 1390 aaPredicted RBP18.7■□□□□ 0.58
SMO-204ENST00000495998 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
SMO-204ENST00000495998 TNS3Q68CZ2 1445 aa18.69■□□□□ 0.58
SMO-204ENST00000495998 NGDNQ8NEJ9 315 aaKnown RBP18.69■□□□□ 0.58
SMO-204ENST00000495998 PPIP5K1Q6PFW1 1433 aa18.68■□□□□ 0.58
SMO-204ENST00000495998 ST20-MTHFSA0A0A6YYL1 179 aa18.67■□□□□ 0.58
SMO-204ENST00000495998 NUTM2BA6NNL0 878 aaPredicted RBP18.67■□□□□ 0.58
SMO-204ENST00000495998 NUTM2EB1AL46 878 aaPredicted RBP18.67■□□□□ 0.58
SMO-204ENST00000495998 NUTM2AQ8IVF1 878 aaPredicted RBP18.67■□□□□ 0.58
SMO-204ENST00000495998 TESK2Q96S53 571 aa18.67■□□□□ 0.58
SMO-204ENST00000495998 PHF23Q9BUL5 403 aaPredicted RBP18.67■□□□□ 0.58
SMO-204ENST00000495998 RGS17Q9UGC6 210 aaPredicted RBP18.67■□□□□ 0.58
SMO-204ENST00000495998 ACEP12821 1306 aa18.67■□□□□ 0.58
SMO-204ENST00000495998 USP47Q96K76 1375 aa18.67■□□□□ 0.58
SMO-204ENST00000495998 ALS2Q96Q42 1657 aa18.65■□□□□ 0.58
SMO-204ENST00000495998 ARHGEF10O15013 1369 aa18.65■□□□□ 0.58
SMO-204ENST00000495998 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.57
SMO-204ENST00000495998 SLC24A1O60721 1099 aa18.63■□□□□ 0.57
SMO-204ENST00000495998 MEX3CQ5U5Q3 659 aaKnown RBP18.63■□□□□ 0.57
SMO-204ENST00000495998 PUS7Q96PZ0 661 aaKnown RBP18.63■□□□□ 0.57
SMO-204ENST00000495998 CABP1Q9NZU7 370 aa18.63■□□□□ 0.57
SMO-204ENST00000495998 ILDR2Q71H61 639 aa18.6■□□□□ 0.57
SMO-204ENST00000495998 BRD4O60885 1362 aaPredicted RBP18.59■□□□□ 0.57
SMO-204ENST00000495998 ADAMTS2O95450 1211 aa18.59■□□□□ 0.57
SMO-204ENST00000495998 LMOD2Q6P5Q4 547 aa18.59■□□□□ 0.57
SMO-204ENST00000495998 ABCA3Q99758 1704 aa18.58■□□□□ 0.57
SMO-204ENST00000495998 PAK3O75914 559 aaPredicted RBP18.58■□□□□ 0.56
SMO-204ENST00000495998 USP6P35125 1406 aa18.57■□□□□ 0.56
SMO-204ENST00000495998 CPSF1Q10570 1443 aaKnown RBP18.57■□□□□ 0.56
SMO-204ENST00000495998 SSH2Q76I76 1423 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms