RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 UPF1Q92900 1129 aaKnown RBP eCLIP7.1□□□□□ -1.27
VPS52-222ENST00000495981 CLUAP1Q96AJ1 413 aa7.1□□□□□ -1.27
VPS52-222ENST00000495981 REREQ9P2R6 1566 aa7.1□□□□□ -1.27
VPS52-222ENST00000495981 MAGI2Q86UL8 1455 aa7.1□□□□□ -1.27
VPS52-222ENST00000495981 ARHGAP35Q9NRY4 1499 aa7.1□□□□□ -1.27
VPS52-222ENST00000495981 C9orf84Q5VXU9 1444 aa7.1□□□□□ -1.27
VPS52-222ENST00000495981 CAMSAP1Q5T5Y3 1602 aa7.09□□□□□ -1.27
VPS52-222ENST00000495981 DIP2CQ9Y2E4 1556 aa7.09□□□□□ -1.27
VPS52-222ENST00000495981 A6NJR5 290 aa7.09□□□□□ -1.27
VPS52-222ENST00000495981 TTLL12Q14166 644 aaPredicted RBP7.09□□□□□ -1.27
VPS52-222ENST00000495981 METRNQ9UJH8 293 aa7.09□□□□□ -1.27
VPS52-222ENST00000495981 BOLA1Q9Y3E2 137 aa7.09□□□□□ -1.27
VPS52-222ENST00000495981 ITSN2Q9NZM3 1697 aa7.09□□□□□ -1.27
VPS52-222ENST00000495981 ABCC1P33527 1531 aa7.08□□□□□ -1.28
VPS52-222ENST00000495981 TRAK2O60296 914 aa7.08□□□□□ -1.28
VPS52-222ENST00000495981 IER5LQ5T953 404 aa7.08□□□□□ -1.28
VPS52-222ENST00000495981 CDC42BPBQ9Y5S2 1711 aa7.07□□□□□ -1.28
VPS52-222ENST00000495981 MCM6Q14566 821 aa7.07□□□□□ -1.28
VPS52-222ENST00000495981 NPDC1Q9NQX5 325 aaPredicted RBP7.07□□□□□ -1.28
VPS52-222ENST00000495981 TCOF1Q13428 1488 aaKnown RBP7.06□□□□□ -1.28
VPS52-222ENST00000495981 PLEKHD1A6NEE1 506 aa7.06□□□□□ -1.28
VPS52-222ENST00000495981 SEC24BO95487 1268 aa7.06□□□□□ -1.28
VPS52-222ENST00000495981 CCDC82Q8N4S0 544 aa7.06□□□□□ -1.28
VPS52-222ENST00000495981 PHOX2BQ99453 314 aa7.06□□□□□ -1.28
VPS52-222ENST00000495981 SETD1BQ9UPS6 1966 aaKnown RBP7.06□□□□□ -1.28
VPS52-222ENST00000495981 CDC42BPAQ5VT25 1732 aa7.05□□□□□ -1.28
VPS52-222ENST00000495981 SH3D19Q5HYK7 790 aa7.05□□□□□ -1.28
VPS52-222ENST00000495981 OCEL1Q9H607 264 aa7.05□□□□□ -1.28
VPS52-222ENST00000495981 PLCH2O75038 1416 aa7.04□□□□□ -1.28
VPS52-222ENST00000495981 FMN1Q68DA7 1419 aa7.04□□□□□ -1.28
VPS52-222ENST00000495981 C3P01024 1663 aa7.04□□□□□ -1.28
VPS52-222ENST00000495981 EVI5O60447 810 aa7.04□□□□□ -1.28
VPS52-222ENST00000495981 PCMTD1Q96MG8 357 aaPredicted RBP7.04□□□□□ -1.28
VPS52-222ENST00000495981 CDHR5Q9HBB8 845 aa7.04□□□□□ -1.28
VPS52-222ENST00000495981 ZMYM3Q14202 1370 aa7.04□□□□□ -1.28
VPS52-222ENST00000495981 ZNF518AQ6AHZ1 1483 aa7.04□□□□□ -1.28
VPS52-222ENST00000495981 TROQ12816 1431 aaPredicted RBP7.03□□□□□ -1.28
VPS52-222ENST00000495981 ARHGAP5Q13017 1502 aa7.03□□□□□ -1.28
VPS52-222ENST00000495981 FNBP4Q8N3X1 1017 aaPredicted RBP7.03□□□□□ -1.28
VPS52-222ENST00000495981 NECTIN2Q92692 538 aa7.03□□□□□ -1.28
VPS52-222ENST00000495981 COLQQ9Y215 455 aaPredicted RBP7.03□□□□□ -1.28
VPS52-222ENST00000495981 PLXNC1O60486 1568 aa7.03□□□□□ -1.28
VPS52-222ENST00000495981 SAMD9LQ8IVG5 1584 aa7.03□□□□□ -1.28
VPS52-222ENST00000495981 INO80Q9ULG1 1556 aaPredicted RBP7.03□□□□□ -1.28
VPS52-222ENST00000495981 KIDINS220Q9ULH0 1771 aa7.03□□□□□ -1.28
VPS52-222ENST00000495981 POTEFA5A3E0 1075 aa7.02□□□□□ -1.29
VPS52-222ENST00000495981 PLCG2P16885 1265 aa7.02□□□□□ -1.29
VPS52-222ENST00000495981 SHANK2Q9UPX8 1470 aa7.02□□□□□ -1.29
VPS52-222ENST00000495981 MROH2AA6NES4 1674 aa7.02□□□□□ -1.29
VPS52-222ENST00000495981 AGLP35573 1532 aa7.01□□□□□ -1.29
VPS52-222ENST00000495981 ZNF142P52746 1687 aaPredicted RBP7.01□□□□□ -1.29
VPS52-222ENST00000495981 PLA2R1Q13018 1463 aa7.01□□□□□ -1.29
VPS52-222ENST00000495981 CCDC18Q5T9S5 1454 aa7.01□□□□□ -1.29
VPS52-222ENST00000495981 FYCO1Q9BQS8 1478 aa7.01□□□□□ -1.29
VPS52-222ENST00000495981 POM121Q96HA1 1249 aa7.01□□□□□ -1.29
VPS52-222ENST00000495981 ANO8Q9HCE9 1232 aaPredicted RBP7.01□□□□□ -1.29
VPS52-222ENST00000495981 NPATQ14207 1427 aa7.01□□□□□ -1.29
VPS52-222ENST00000495981 RANGAP1P46060 587 aaPredicted RBP7□□□□□ -1.29
VPS52-222ENST00000495981 EFCAB2Q5VUJ9 269 aa7□□□□□ -1.29
VPS52-222ENST00000495981 PROCA1Q8NCQ7 364 aaPredicted RBP7□□□□□ -1.29
VPS52-222ENST00000495981 PTCD2Q8WV60 388 aaKnown RBP7□□□□□ -1.29
VPS52-222ENST00000495981 ESF1Q9H501 851 aaKnown RBP7□□□□□ -1.29
VPS52-222ENST00000495981 SYCP2Q9BX26 1530 aa7□□□□□ -1.29
VPS52-222ENST00000495981 PTPRKQ15262 1439 aa7□□□□□ -1.29
VPS52-222ENST00000495981 MLH3Q9UHC1 1453 aa6.99□□□□□ -1.29
VPS52-222ENST00000495981 SETD1AO15047 1707 aaKnown RBP6.99□□□□□ -1.29
VPS52-222ENST00000495981 MYO3AQ8NEV4 1616 aa6.99□□□□□ -1.29
VPS52-222ENST00000495981 CLCN1P35523 988 aa6.99□□□□□ -1.29
VPS52-222ENST00000495981 MDM2Q00987 491 aaPredicted RBP6.99□□□□□ -1.29
VPS52-222ENST00000495981 EN1Q05925 392 aaPredicted RBP6.99□□□□□ -1.29
VPS52-222ENST00000495981 SKIV2LQ15477 1246 aaKnown RBP6.99□□□□□ -1.29
VPS52-222ENST00000495981 LHX8Q68G74 356 aa6.99□□□□□ -1.29
VPS52-222ENST00000495981 GPCPD1Q9NPB8 672 aa6.99□□□□□ -1.29
VPS52-222ENST00000495981 MYT1LQ9UL68 1186 aa6.99□□□□□ -1.29
VPS52-222ENST00000495981 CASKIN1Q8WXD9 1431 aa6.99□□□□□ -1.29
VPS52-222ENST00000495981 POTEB2H3BUK9 544 aa6.98□□□□□ -1.29
VPS52-222ENST00000495981 FBXO31Q5XUX0 539 aaPredicted RBP6.98□□□□□ -1.29
VPS52-222ENST00000495981 PROSER2Q86WR7 435 aaPredicted RBP6.98□□□□□ -1.29
VPS52-222ENST00000495981 CLIP1P30622 1438 aa6.98□□□□□ -1.29
VPS52-222ENST00000495981 VWDEQ8N2E2 1590 aa6.98□□□□□ -1.29
VPS52-222ENST00000495981 CPS1P31327 1500 aa6.97□□□□□ -1.29
VPS52-222ENST00000495981 TBC1D12O60347 775 aa6.97□□□□□ -1.29
VPS52-222ENST00000495981 SSTR3P32745 418 aaPredicted RBP6.97□□□□□ -1.29
VPS52-222ENST00000495981 TIAM1Q13009 1591 aa6.97□□□□□ -1.29
VPS52-222ENST00000495981 TRIM52Q96A61 297 aa6.97□□□□□ -1.29
VPS52-222ENST00000495981 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.97□□□□□ -1.29
VPS52-222ENST00000495981 ZNF777Q9ULD5 760 aaPredicted RBP6.97□□□□□ -1.29
VPS52-222ENST00000495981 ADGBQ8N7X0 1667 aa6.96□□□□□ -1.29
VPS52-222ENST00000495981 ATP7AQ04656 1500 aa6.96□□□□□ -1.29
VPS52-222ENST00000495981 LRRC7Q96NW7 1537 aa6.96□□□□□ -1.29
VPS52-222ENST00000495981 NEURL4Q96JN8 1562 aa6.96□□□□□ -1.29
VPS52-222ENST00000495981 CNTLNQ9NXG0 1405 aa6.96□□□□□ -1.3
VPS52-222ENST00000495981 PDIA4P13667 645 aaKnown RBP6.96□□□□□ -1.3
VPS52-222ENST00000495981 TSR1Q2NL82 804 aaKnown RBP6.96□□□□□ -1.3
VPS52-222ENST00000495981 NLRP7Q8WX94 980 aa6.96□□□□□ -1.3
VPS52-222ENST00000495981 BEGAINQ9BUH8 593 aa6.96□□□□□ -1.3
VPS52-222ENST00000495981 FAM217BQ9NTX9 383 aaPredicted RBP6.96□□□□□ -1.3
VPS52-222ENST00000495981 PHF14O94880 888 aa6.95□□□□□ -1.3
VPS52-222ENST00000495981 FAM161AQ3B820 660 aa6.95□□□□□ -1.3
VPS52-222ENST00000495981 NPM2Q86SE8 214 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms