RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 NINLQ9Y2I6 1382 aa33.38■■■□□ 2.93
PPP1R3F-205ENST00000495799 NPHP4O75161 1426 aaPredicted RBP33.37■■■□□ 2.93
PPP1R3F-205ENST00000495799 PTCH1Q13635 1447 aa33.37■■■□□ 2.93
PPP1R3F-205ENST00000495799 WAPLQ7Z5K2 1190 aa33.37■■■□□ 2.93
PPP1R3F-205ENST00000495799 ATAD2Q6PL18 1390 aa33.37■■■□□ 2.93
PPP1R3F-205ENST00000495799 PTPRUQ92729 1446 aa33.36■■■□□ 2.93
PPP1R3F-205ENST00000495799 PLEKHH1Q9ULM0 1364 aa33.36■■■□□ 2.93
PPP1R3F-205ENST00000495799 XRN1Q8IZH2 1706 aaKnown RBP33.35■■■□□ 2.93
PPP1R3F-205ENST00000495799 PER1O15534 1290 aaPredicted RBP33.35■■■□□ 2.93
PPP1R3F-205ENST00000495799 SRPK2P78362 688 aaKnown RBP33.33■■■□□ 2.93
PPP1R3F-205ENST00000495799 ROBO2Q9HCK4 1378 aa33.33■■■□□ 2.93
PPP1R3F-205ENST00000495799 AMOTL2Q9Y2J4 779 aa33.33■■■□□ 2.93
PPP1R3F-205ENST00000495799 KNSTRNQ9Y448 316 aa33.31■■■□□ 2.92
PPP1R3F-205ENST00000495799 RALBP1Q15311 655 aa33.3■■■□□ 2.92
PPP1R3F-205ENST00000495799 ADGRB2O60241 1585 aa33.3■■■□□ 2.92
PPP1R3F-205ENST00000495799 TMC1Q8TDI8 760 aa33.28■■■□□ 2.92
PPP1R3F-205ENST00000495799 CABP2Q9NPB3 220 aa33.28■■■□□ 2.92
PPP1R3F-205ENST00000495799 CHD2O14647 1828 aaKnown RBP33.28■■■□□ 2.92
PPP1R3F-205ENST00000495799 CDK19Q9BWU1 502 aa33.28■■■□□ 2.92
PPP1R3F-205ENST00000495799 NPC1L1Q9UHC9 1359 aa33.24■■■□□ 2.91
PPP1R3F-205ENST00000495799 NCKAP5LQ9HCH0 1330 aa33.23■■■□□ 2.91
PPP1R3F-205ENST00000495799 WASLO00401 505 aaPredicted RBP33.23■■■□□ 2.91
PPP1R3F-205ENST00000495799 ANKRD36BQ8N2N9 1353 aa33.22■■■□□ 2.91
PPP1R3F-205ENST00000495799 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.22■■■□□ 2.91
PPP1R3F-205ENST00000495799 PARD3Q8TEW0 1356 aa33.21■■■□□ 2.91
PPP1R3F-205ENST00000495799 SLC12A5Q9H2X9 1139 aa33.21■■■□□ 2.91
PPP1R3F-205ENST00000495799 USP32Q8NFA0 1604 aa33.18■■■□□ 2.9
PPP1R3F-205ENST00000495799 MYBBP1AQ9BQG0 1328 aaKnown RBP33.18■■■□□ 2.9
PPP1R3F-205ENST00000495799 CNGB1Q14028 1251 aaPredicted RBP33.17■■■□□ 2.9
PPP1R3F-205ENST00000495799 LMTK3Q96Q04 1460 aa33.16■■■□□ 2.9
PPP1R3F-205ENST00000495799 KCNA6P17658 529 aa33.16■■■□□ 2.9
PPP1R3F-205ENST00000495799 NWD1Q149M9 1564 aa33.15■■■□□ 2.9
PPP1R3F-205ENST00000495799 AMER1Q5JTC6 1135 aaPredicted RBP33.15■■■□□ 2.9
PPP1R3F-205ENST00000495799 TERF2IPQ9NYB0 399 aa33.15■■■□□ 2.9
PPP1R3F-205ENST00000495799 CC2D1BQ5T0F9 858 aaKnown RBP33.14■■■□□ 2.9
PPP1R3F-205ENST00000495799 NSD3Q9BZ95 1437 aa33.14■■■□□ 2.9
PPP1R3F-205ENST00000495799 ATP7BP35670 1465 aa33.13■■■□□ 2.89
PPP1R3F-205ENST00000495799 CARD14Q9BXL6 1004 aa33.12■■■□□ 2.89
PPP1R3F-205ENST00000495799 HDGFL2Q7Z4V5 671 aaPredicted RBP33.11■■■□□ 2.89
PPP1R3F-205ENST00000495799 MRS2Q9HD23 443 aa33.11■■■□□ 2.89
PPP1R3F-205ENST00000495799 YTHDC1Q96MU7 727 aaKnown RBP33.1■■■□□ 2.89
PPP1R3F-205ENST00000495799 BRD4O60885 1362 aaPredicted RBP33.08■■■□□ 2.89
PPP1R3F-205ENST00000495799 NUDT16Q96DE0 195 aaKnown RBP33.07■■■□□ 2.89
PPP1R3F-205ENST00000495799 A0A1W2PP64 1363 aa33.07■■■□□ 2.88
PPP1R3F-205ENST00000495799 CGNL1Q0VF96 1302 aa33.07■■■□□ 2.88
PPP1R3F-205ENST00000495799 NSD2O96028 1365 aa33.06■■■□□ 2.88
PPP1R3F-205ENST00000495799 PPIP5K1Q6PFW1 1433 aa33.06■■■□□ 2.88
PPP1R3F-205ENST00000495799 NLRP13Q86W25 1043 aa33.06■■■□□ 2.88
PPP1R3F-205ENST00000495799 CCDC61Q9Y6R9 512 aa33.06■■■□□ 2.88
PPP1R3F-205ENST00000495799 HSPA2P54652 639 aa33.05■■■□□ 2.88
PPP1R3F-205ENST00000495799 CABP1Q9NZU7 370 aa33.05■■■□□ 2.88
PPP1R3F-205ENST00000495799 CD163L1Q9NR16 1453 aa33.04■■■□□ 2.88
PPP1R3F-205ENST00000495799 NKTRP30414 1462 aaKnown RBP33.03■■■□□ 2.88
PPP1R3F-205ENST00000495799 ITSN1Q15811 1721 aa33.03■■■□□ 2.88
PPP1R3F-205ENST00000495799 TOPAZ1Q8N9V7 1692 aa33.03■■■□□ 2.88
PPP1R3F-205ENST00000495799 CENPBP07199 599 aaPredicted RBP33.02■■■□□ 2.88
PPP1R3F-205ENST00000495799 CDC42BPGQ6DT37 1551 aa33.02■■■□□ 2.88
PPP1R3F-205ENST00000495799 NALCNQ8IZF0 1738 aa32.99■■■□□ 2.87
PPP1R3F-205ENST00000495799 ANKARQ7Z5J8 1434 aa32.99■■■□□ 2.87
PPP1R3F-205ENST00000495799 CCDC184Q52MB2 194 aa32.98■■■□□ 2.87
PPP1R3F-205ENST00000495799 FMN2Q9NZ56 1722 aa32.98■■■□□ 2.87
PPP1R3F-205ENST00000495799 STRCQ7RTU9 1775 aa32.97■■■□□ 2.87
PPP1R3F-205ENST00000495799 ADGRL3Q9HAR2 1447 aa32.97■■■□□ 2.87
PPP1R3F-205ENST00000495799 PRR36Q9H6K5 1346 aa32.96■■■□□ 2.87
PPP1R3F-205ENST00000495799 CPSF1Q10570 1443 aaKnown RBP32.96■■■□□ 2.87
PPP1R3F-205ENST00000495799 AKAP12Q02952 1782 aa32.96■■■□□ 2.87
PPP1R3F-205ENST00000495799 MON2Q7Z3U7 1717 aa32.94■■■□□ 2.86
PPP1R3F-205ENST00000495799 ZNF692Q9BU19 519 aaPredicted RBP32.93■■■□□ 2.86
PPP1R3F-205ENST00000495799 KIF20BQ96Q89 1820 aa32.93■■■□□ 2.86
PPP1R3F-205ENST00000495799 ANKRD26Q9UPS8 1709 aa32.93■■■□□ 2.86
PPP1R3F-205ENST00000495799 EDC4Q6P2E9 1401 aaKnown RBP32.91■■■□□ 2.86
PPP1R3F-205ENST00000495799 PLEKHG3A1L390 1219 aa32.91■■■□□ 2.86
PPP1R3F-205ENST00000495799 PPP2R1AP30153 589 aa32.91■■■□□ 2.86
PPP1R3F-205ENST00000495799 MORC1Q86VD1 984 aa32.91■■■□□ 2.86
PPP1R3F-205ENST00000495799 PROSER2Q86WR7 435 aaPredicted RBP32.88■■■□□ 2.85
PPP1R3F-205ENST00000495799 NCOA3Q9Y6Q9 1424 aa32.87■■■□□ 2.85
PPP1R3F-205ENST00000495799 C14orf37Q86TY3 774 aa32.87■■■□□ 2.85
PPP1R3F-205ENST00000495799 FAM9BQ8IZU0 186 aa32.86■■■□□ 2.85
PPP1R3F-205ENST00000495799 NUTM2FA1L443 756 aa32.84■■■□□ 2.85
PPP1R3F-205ENST00000495799 RGPD8O14715 1765 aaPredicted RBP32.83■■■□□ 2.85
PPP1R3F-205ENST00000495799 PNISRQ8TF01 805 aaKnown RBP32.82■■■□□ 2.85
PPP1R3F-205ENST00000495799 STRCP1A6NGW2 1772 aa32.82■■■□□ 2.84
PPP1R3F-205ENST00000495799 ACEP12821 1306 aa32.81■■■□□ 2.84
PPP1R3F-205ENST00000495799 FYB1O15117 783 aa32.8■■■□□ 2.84
PPP1R3F-205ENST00000495799 POLR3AO14802 1390 aaPredicted RBP32.79■■■□□ 2.84
PPP1R3F-205ENST00000495799 NRKQ7Z2Y5 1582 aa32.79■■■□□ 2.84
PPP1R3F-205ENST00000495799 DMRT2Q9Y5R5 561 aa32.79■■■□□ 2.84
PPP1R3F-205ENST00000495799 GGNBP2Q9H3C7 697 aa32.77■■■□□ 2.84
PPP1R3F-205ENST00000495799 USP6P35125 1406 aa32.77■■■□□ 2.84
PPP1R3F-205ENST00000495799 RBM33Q96EV2 1170 aaKnown RBP32.76■■■□□ 2.83
PPP1R3F-205ENST00000495799 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.75■■■□□ 2.83
PPP1R3F-205ENST00000495799 DCCP43146 1447 aa32.74■■■□□ 2.83
PPP1R3F-205ENST00000495799 NGDNQ8NEJ9 315 aaKnown RBP32.74■■■□□ 2.83
PPP1R3F-205ENST00000495799 C19orf44Q9H6X5 657 aa32.74■■■□□ 2.83
PPP1R3F-205ENST00000495799 TMEM94Q12767 1356 aa32.73■■■□□ 2.83
PPP1R3F-205ENST00000495799 INSRP06213 1382 aa32.72■■■□□ 2.83
PPP1R3F-205ENST00000495799 HNRNPUQ00839 825 aaKnown RBP eCLIP32.72■■■□□ 2.83
PPP1R3F-205ENST00000495799 PMFBP1Q8TBY8 1022 aa32.71■■■□□ 2.83
PPP1R3F-205ENST00000495799 TTC21BQ7Z4L5 1316 aa32.7■■■□□ 2.82
PPP1R3F-205ENST00000495799 TTC21AQ8NDW8 1320 aa32.7■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms