RNA–Protein interactions for RNA: ENST00000495794.5

BRD9-213, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 4,865 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-213ENST00000495794 PRAM1Q96QH2 718 aa17.05■□□□□ 0.32
BRD9-213ENST00000495794 CDK13Q14004 1512 aaKnown RBP17.05■□□□□ 0.32
BRD9-213ENST00000495794 EVA1CP58658 441 aa17.05■□□□□ 0.32
BRD9-213ENST00000495794 AKNAQ7Z591 1439 aa17.05■□□□□ 0.32
BRD9-213ENST00000495794 TMX4Q9H1E5 349 aaPredicted RBP17.05■□□□□ 0.32
BRD9-213ENST00000495794 IQGAP2Q13576 1575 aa17.04■□□□□ 0.32
BRD9-213ENST00000495794 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
BRD9-213ENST00000495794 LRRFIP1Q32MZ4 808 aaKnown RBP17.04■□□□□ 0.32
BRD9-213ENST00000495794 HSP90AB4PQ58FF6 505 aa17.03■□□□□ 0.32
BRD9-213ENST00000495794 RASSF8Q8NHQ8 419 aa17.03■□□□□ 0.32
BRD9-213ENST00000495794 ARID3AQ99856 593 aa17.03■□□□□ 0.32
BRD9-213ENST00000495794 KIAA0586Q9BVV6 1533 aa17.03■□□□□ 0.32
BRD9-213ENST00000495794 NUTM2GQ5VZR2 741 aa17.02■□□□□ 0.32
BRD9-213ENST00000495794 RAPGEF4Q8WZA2 1011 aa17.02■□□□□ 0.32
BRD9-213ENST00000495794 BCAR3O75815 825 aa17.02■□□□□ 0.31
BRD9-213ENST00000495794 RSPH6AQ9H0K4 717 aa17.02■□□□□ 0.31
BRD9-213ENST00000495794 SLC52A1Q9NWF4 448 aa17.02■□□□□ 0.31
BRD9-213ENST00000495794 NFKBIBQ15653 356 aa17.01■□□□□ 0.31
BRD9-213ENST00000495794 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
BRD9-213ENST00000495794 NUCB2P80303 420 aa17.01■□□□□ 0.31
BRD9-213ENST00000495794 CPLX2Q6PUV4 134 aaKnown RBP17.01■□□□□ 0.31
BRD9-213ENST00000495794 CLSTN1O94985 981 aa17■□□□□ 0.31
BRD9-213ENST00000495794 ERBINQ96RT1 1412 aa17■□□□□ 0.31
BRD9-213ENST00000495794 CDC45O75419 566 aa17■□□□□ 0.31
BRD9-213ENST00000495794 RNF20Q5VTR2 975 aa17■□□□□ 0.31
BRD9-213ENST00000495794 PDZRN3Q9UPQ7 1066 aa17■□□□□ 0.31
BRD9-213ENST00000495794 TSR2Q969E8 191 aaKnown RBP16.99■□□□□ 0.31
BRD9-213ENST00000495794 URB2Q14146 1524 aaKnown RBP16.99■□□□□ 0.31
BRD9-213ENST00000495794 UBTFL1P0CB47 393 aaPredicted RBP16.99■□□□□ 0.31
BRD9-213ENST00000495794 MCTP1Q6DN14 999 aa16.99■□□□□ 0.31
BRD9-213ENST00000495794 TWISTNBQ3B726 338 aaPredicted RBP16.98■□□□□ 0.31
BRD9-213ENST00000495794 TXNDC2Q86VQ3 553 aa16.98■□□□□ 0.31
BRD9-213ENST00000495794 CABP1Q9NZU7 370 aa16.98■□□□□ 0.31
BRD9-213ENST00000495794 BECN2A8MW95 431 aa16.98■□□□□ 0.31
BRD9-213ENST00000495794 ERC2O15083 957 aa16.98■□□□□ 0.31
BRD9-213ENST00000495794 GOLGA6L19H0YKK7 550 aa16.98■□□□□ 0.31
BRD9-213ENST00000495794 SMG6Q86US8 1419 aaKnown RBP16.97■□□□□ 0.31
BRD9-213ENST00000495794 GNAI3P08754 354 aa16.97■□□□□ 0.31
BRD9-213ENST00000495794 GAS2L2Q8NHY3 880 aa16.97■□□□□ 0.31
BRD9-213ENST00000495794 NLRP2Q9NX02 1062 aa16.97■□□□□ 0.31
BRD9-213ENST00000495794 WDR63Q8IWG1 891 aa16.96■□□□□ 0.31
BRD9-213ENST00000495794 CREBRFQ8IUR6 639 aa16.96■□□□□ 0.31
BRD9-213ENST00000495794 CDK19Q9BWU1 502 aa16.96■□□□□ 0.31
BRD9-213ENST00000495794 ANKRD30BQ9BXX2 1392 aa16.96■□□□□ 0.31
BRD9-213ENST00000495794 PTPN23Q9H3S7 1636 aa16.96■□□□□ 0.31
BRD9-213ENST00000495794 G3V3G9 751 aa16.96■□□□□ 0.31
BRD9-213ENST00000495794 DCAF8Q5TAQ9 597 aa16.96■□□□□ 0.31
BRD9-213ENST00000495794 SYNE3Q6ZMZ3 975 aa16.96■□□□□ 0.3
BRD9-213ENST00000495794 AIMP1Q12904 312 aaKnown RBP16.95■□□□□ 0.3
BRD9-213ENST00000495794 RIC3Q7Z5B4 369 aa16.95■□□□□ 0.3
BRD9-213ENST00000495794 AKAP17AQ02040 695 aaKnown RBP16.95■□□□□ 0.3
BRD9-213ENST00000495794 ABTB2Q8N961 1025 aa16.95■□□□□ 0.3
BRD9-213ENST00000495794 SMC3Q9UQE7 1217 aa16.95■□□□□ 0.3
BRD9-213ENST00000495794 C11orf95C9JLR9 678 aaPredicted RBP16.95■□□□□ 0.3
BRD9-213ENST00000495794 CCDC30Q5VVM6 783 aa16.95■□□□□ 0.3
BRD9-213ENST00000495794 BACH2Q9BYV9 841 aa16.95■□□□□ 0.3
BRD9-213ENST00000495794 VPS37CA5D8V6 355 aaPredicted RBP16.94■□□□□ 0.3
BRD9-213ENST00000495794 CPLX1O14810 134 aa16.94■□□□□ 0.3
BRD9-213ENST00000495794 RAPGEF3O95398 923 aa16.94■□□□□ 0.3
BRD9-213ENST00000495794 NOB1Q9ULX3 412 aaKnown RBP16.94■□□□□ 0.3
BRD9-213ENST00000495794 APPP05067 770 aa16.93■□□□□ 0.3
BRD9-213ENST00000495794 CT47B1P0C2W7 299 aaPredicted RBP16.93■□□□□ 0.3
BRD9-213ENST00000495794 SULT6B1Q6IMI4 303 aa16.93■□□□□ 0.3
BRD9-213ENST00000495794 RPGRIP1LQ68CZ1 1315 aa16.93■□□□□ 0.3
BRD9-213ENST00000495794 SURF6O75683 361 aaKnown RBP16.93■□□□□ 0.3
BRD9-213ENST00000495794 ATF3P18847 181 aa16.93■□□□□ 0.3
BRD9-213ENST00000495794 ZNF692Q9BU19 519 aaPredicted RBP16.93■□□□□ 0.3
BRD9-213ENST00000495794 CLASRPQ8N2M8 674 aaKnown RBP16.93■□□□□ 0.3
BRD9-213ENST00000495794 SYTL4Q96C24 671 aaPredicted RBP16.93■□□□□ 0.3
BRD9-213ENST00000495794 GCC1Q96CN9 775 aa16.92■□□□□ 0.3
BRD9-213ENST00000495794 TRDNQ13061 729 aa16.92■□□□□ 0.3
BRD9-213ENST00000495794 HSP90AA2PQ14568 343 aaPredicted RBP16.92■□□□□ 0.3
BRD9-213ENST00000495794 ATF7IPQ6VMQ6 1270 aa16.92■□□□□ 0.3
BRD9-213ENST00000495794 C1orf115Q9H7X2 142 aa16.91■□□□□ 0.3
BRD9-213ENST00000495794 BICD2Q8TD16 824 aa16.91■□□□□ 0.3
BRD9-213ENST00000495794 MARCH6O60337 910 aa16.9■□□□□ 0.3
BRD9-213ENST00000495794 NEUROD6Q96NK8 337 aa16.9■□□□□ 0.3
BRD9-213ENST00000495794 ABCC5O15440 1437 aa16.9■□□□□ 0.3
BRD9-213ENST00000495794 GPRASP1Q5JY77 1395 aa16.89■□□□□ 0.29
BRD9-213ENST00000495794 ARHGEF11O15085 1522 aa16.89■□□□□ 0.29
BRD9-213ENST00000495794 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
BRD9-213ENST00000495794 TRIM29Q14134 588 aa16.89■□□□□ 0.29
BRD9-213ENST00000495794 MVPQ14764 893 aaKnown RBP16.88■□□□□ 0.29
BRD9-213ENST00000495794 NINLQ9Y2I6 1382 aa16.88■□□□□ 0.29
BRD9-213ENST00000495794 CCDC141Q6ZP82 1450 aa16.88■□□□□ 0.29
BRD9-213ENST00000495794 TPM3P06753 285 aa16.88■□□□□ 0.29
BRD9-213ENST00000495794 ATAD2Q6PL18 1390 aa16.88■□□□□ 0.29
BRD9-213ENST00000495794 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
BRD9-213ENST00000495794 GRIN2AQ12879 1464 aa16.87■□□□□ 0.29
BRD9-213ENST00000495794 NEK4P51957 841 aa16.87■□□□□ 0.29
BRD9-213ENST00000495794 SLFN5Q08AF3 891 aa16.87■□□□□ 0.29
BRD9-213ENST00000495794 PLEKHO1Q53GL0 409 aaPredicted RBP16.87■□□□□ 0.29
BRD9-213ENST00000495794 WWC1Q8IX03 1113 aa16.87■□□□□ 0.29
BRD9-213ENST00000495794 TPD52L1Q16890 204 aaPredicted RBP16.87■□□□□ 0.29
BRD9-213ENST00000495794 ESCO1Q5FWF5 840 aa16.87■□□□□ 0.29
BRD9-213ENST00000495794 PLB1Q6P1J6 1458 aa16.87■□□□□ 0.29
BRD9-213ENST00000495794 PES1O00541 588 aaKnown RBP16.87■□□□□ 0.29
BRD9-213ENST00000495794 GNAI2P04899 355 aa16.87■□□□□ 0.29
BRD9-213ENST00000495794 CNTROBQ8N137 903 aa16.86■□□□□ 0.29
BRD9-213ENST00000495794 HDGFL1Q5TGJ6 251 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms