RNA–Protein interactions for RNA: ENST00000495636.1

SLC6A1-205, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 1,088 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-205ENST00000495636 AFF2P51816 1311 aa23.79■■□□□ 1.4
SLC6A1-205ENST00000495636 KNDC1Q76NI1 1749 aa23.79■■□□□ 1.4
SLC6A1-205ENST00000495636 ABCC11Q96J66 1382 aa23.78■■□□□ 1.4
SLC6A1-205ENST00000495636 STK26Q9P289 416 aa23.77■■□□□ 1.4
SLC6A1-205ENST00000495636 RXRBP28702 533 aa23.76■■□□□ 1.39
SLC6A1-205ENST00000495636 CDK12Q9NYV4 1490 aaPredicted RBP23.75■■□□□ 1.39
SLC6A1-205ENST00000495636 C8orf37Q96NL8 207 aa23.75■■□□□ 1.39
SLC6A1-205ENST00000495636 RAB3GAP2Q9H2M9 1393 aa23.75■■□□□ 1.39
SLC6A1-205ENST00000495636 TMEM132EQ6IEE7 984 aa23.74■■□□□ 1.39
SLC6A1-205ENST00000495636 WAPLQ7Z5K2 1190 aa23.73■■□□□ 1.39
SLC6A1-205ENST00000495636 NPHP3Q7Z494 1330 aa23.73■■□□□ 1.39
SLC6A1-205ENST00000495636 YTHDC2Q9H6S0 1430 aaKnown RBP23.73■■□□□ 1.39
SLC6A1-205ENST00000495636 MYOM2P54296 1465 aa23.73■■□□□ 1.39
SLC6A1-205ENST00000495636 ESCO1Q5FWF5 840 aa23.72■■□□□ 1.39
SLC6A1-205ENST00000495636 NRXN1Q9ULB1 1477 aa23.72■■□□□ 1.39
SLC6A1-205ENST00000495636 PLEKHH1Q9ULM0 1364 aa23.71■■□□□ 1.39
SLC6A1-205ENST00000495636 C14orf93Q9H972 538 aaKnown RBP23.7■■□□□ 1.38
SLC6A1-205ENST00000495636 COL22A1Q8NFW1 1626 aaPredicted RBP23.7■■□□□ 1.38
SLC6A1-205ENST00000495636 ADAMTS2O95450 1211 aa23.69■■□□□ 1.38
SLC6A1-205ENST00000495636 PXDNQ92626 1479 aa23.68■■□□□ 1.38
SLC6A1-205ENST00000495636 SIRT1Q96EB6 747 aa23.68■■□□□ 1.38
SLC6A1-205ENST00000495636 NGLY1Q96IV0 654 aa23.67■■□□□ 1.38
SLC6A1-205ENST00000495636 FMN2Q9NZ56 1722 aa23.67■■□□□ 1.38
SLC6A1-205ENST00000495636 QTRT2Q9H974 415 aaKnown RBP23.66■■□□□ 1.38
SLC6A1-205ENST00000495636 DHX57Q6P158 1386 aaKnown RBP23.65■■□□□ 1.38
SLC6A1-205ENST00000495636 FOXO3O43524 673 aa23.65■■□□□ 1.38
SLC6A1-205ENST00000495636 RBM6P78332 1123 aaKnown RBP23.65■■□□□ 1.38
SLC6A1-205ENST00000495636 NUTM2FA1L443 756 aa23.64■■□□□ 1.37
SLC6A1-205ENST00000495636 CFAP70Q5T0N1 1121 aa23.64■■□□□ 1.37
SLC6A1-205ENST00000495636 UPF1Q92900 1129 aaKnown RBP eCLIP23.64■■□□□ 1.37
SLC6A1-205ENST00000495636 KIF1AQ12756 1690 aa23.63■■□□□ 1.37
SLC6A1-205ENST00000495636 RGS12O14924 1447 aa23.62■■□□□ 1.37
SLC6A1-205ENST00000495636 XPCQ01831 940 aaPredicted RBP23.61■■□□□ 1.37
SLC6A1-205ENST00000495636 FNBP4Q8N3X1 1017 aaPredicted RBP23.6■■□□□ 1.37
SLC6A1-205ENST00000495636 USP21Q9UK80 565 aa23.6■■□□□ 1.37
SLC6A1-205ENST00000495636 DLC1Q96QB1 1528 aa23.59■■□□□ 1.37
SLC6A1-205ENST00000495636 TRPC5Q9UL62 973 aaPredicted RBP23.58■■□□□ 1.37
SLC6A1-205ENST00000495636 HRCP23327 699 aa23.56■■□□□ 1.36
SLC6A1-205ENST00000495636 PRAM1Q96QH2 718 aa23.56■■□□□ 1.36
SLC6A1-205ENST00000495636 ADGRB1O14514 1584 aa23.56■■□□□ 1.36
SLC6A1-205ENST00000495636 MARF1Q9Y4F3 1742 aaKnown RBP23.56■■□□□ 1.36
SLC6A1-205ENST00000495636 SPATA31A3Q5VYP0 1347 aa23.55■■□□□ 1.36
SLC6A1-205ENST00000495636 ATRNO75882 1429 aa23.54■■□□□ 1.36
SLC6A1-205ENST00000495636 SAFB2Q14151 953 aaKnown RBP eCLIP23.53■■□□□ 1.36
SLC6A1-205ENST00000495636 PHF8Q9UPP1 1060 aa23.53■■□□□ 1.36
SLC6A1-205ENST00000495636 ADGRB2O60241 1585 aa23.52■■□□□ 1.36
SLC6A1-205ENST00000495636 RGPD8O14715 1765 aaPredicted RBP23.52■■□□□ 1.36
SLC6A1-205ENST00000495636 KRT28Q7Z3Y7 464 aa23.52■■□□□ 1.36
SLC6A1-205ENST00000495636 STAC3Q96MF2 364 aa23.52■■□□□ 1.36
SLC6A1-205ENST00000495636 POGKQ9P215 609 aa23.52■■□□□ 1.36
SLC6A1-205ENST00000495636 ANKARQ7Z5J8 1434 aa23.5■■□□□ 1.35
SLC6A1-205ENST00000495636 BCL9LQ86UU0 1499 aa23.5■■□□□ 1.35
SLC6A1-205ENST00000495636 DCAF11Q8TEB1 546 aa23.5■■□□□ 1.35
SLC6A1-205ENST00000495636 TNS3Q68CZ2 1445 aa23.5■■□□□ 1.35
SLC6A1-205ENST00000495636 PSME1Q06323 249 aa23.49■■□□□ 1.35
SLC6A1-205ENST00000495636 KDM2AQ9Y2K7 1162 aa23.49■■□□□ 1.35
SLC6A1-205ENST00000495636 TRAK1Q9UPV9 953 aa23.47■■□□□ 1.35
SLC6A1-205ENST00000495636 SBNO1A3KN83 1393 aa23.47■■□□□ 1.35
SLC6A1-205ENST00000495636 ATAD2Q6PL18 1390 aa23.46■■□□□ 1.35
SLC6A1-205ENST00000495636 USP32Q8NFA0 1604 aa23.46■■□□□ 1.35
SLC6A1-205ENST00000495636 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.46■■□□□ 1.35
SLC6A1-205ENST00000495636 EIF3AQ14152 1382 aaKnown RBP23.45■■□□□ 1.34
SLC6A1-205ENST00000495636 SLIT2O94813 1529 aa23.44■■□□□ 1.34
SLC6A1-205ENST00000495636 ARHGEF10O15013 1369 aa23.43■■□□□ 1.34
SLC6A1-205ENST00000495636 GJD4Q96KN9 370 aaPredicted RBP23.42■■□□□ 1.34
SLC6A1-205ENST00000495636 MINK1Q8N4C8 1332 aaPredicted RBP23.41■■□□□ 1.34
SLC6A1-205ENST00000495636 HAP1P54257 671 aaPredicted RBP23.41■■□□□ 1.34
SLC6A1-205ENST00000495636 UNC5CLQ8IV45 518 aa23.41■■□□□ 1.34
SLC6A1-205ENST00000495636 PMFBP1Q8TBY8 1022 aa23.41■■□□□ 1.34
SLC6A1-205ENST00000495636 HIRIP3Q9BW71 556 aaPredicted RBP23.41■■□□□ 1.34
SLC6A1-205ENST00000495636 TULP4Q9NRJ4 1543 aa23.41■■□□□ 1.34
SLC6A1-205ENST00000495636 ABCA3Q99758 1704 aa23.39■■□□□ 1.33
SLC6A1-205ENST00000495636 WASLO00401 505 aaPredicted RBP23.38■■□□□ 1.33
SLC6A1-205ENST00000495636 LMOD2Q6P5Q4 547 aa23.38■■□□□ 1.33
SLC6A1-205ENST00000495636 PRR36Q9H6K5 1346 aa23.37■■□□□ 1.33
SLC6A1-205ENST00000495636 ARHGEF28Q8N1W1 1705 aaKnown RBP23.37■■□□□ 1.33
SLC6A1-205ENST00000495636 CABLES1Q8TDN4 633 aa23.37■■□□□ 1.33
SLC6A1-205ENST00000495636 RALGAPBQ86X10 1494 aa23.36■■□□□ 1.33
SLC6A1-205ENST00000495636 TRPM3Q9HCF6 1732 aaPredicted RBP23.36■■□□□ 1.33
SLC6A1-205ENST00000495636 GLI3P10071 1580 aa23.36■■□□□ 1.33
SLC6A1-205ENST00000495636 GPRASP1Q5JY77 1395 aa23.36■■□□□ 1.33
SLC6A1-205ENST00000495636 NWD2Q9ULI1 1742 aa23.34■■□□□ 1.33
SLC6A1-205ENST00000495636 PLCH1Q4KWH8 1693 aa23.34■■□□□ 1.33
SLC6A1-205ENST00000495636 PLEKHG5O94827 1062 aa23.33■■□□□ 1.33
SLC6A1-205ENST00000495636 ALS2Q96Q42 1657 aa23.32■■□□□ 1.32
SLC6A1-205ENST00000495636 KIAA1210Q9ULL0 1709 aa23.31■■□□□ 1.32
SLC6A1-205ENST00000495636 ATP7BP35670 1465 aa23.3■■□□□ 1.32
SLC6A1-205ENST00000495636 VPS72Q15906 364 aa23.3■■□□□ 1.32
SLC6A1-205ENST00000495636 ITSN1Q15811 1721 aa23.3■■□□□ 1.32
SLC6A1-205ENST00000495636 NGDNQ8NEJ9 315 aaKnown RBP23.29■■□□□ 1.32
SLC6A1-205ENST00000495636 CCDC125Q86Z20 511 aa23.28■■□□□ 1.32
SLC6A1-205ENST00000495636 FAM83GA6ND36 823 aa23.26■■□□□ 1.31
SLC6A1-205ENST00000495636 NUDT16Q96DE0 195 aaKnown RBP23.26■■□□□ 1.31
SLC6A1-205ENST00000495636 CCDC9Q9Y3X0 531 aaKnown RBP23.25■■□□□ 1.31
SLC6A1-205ENST00000495636 SEPT12Q8IYM1 358 aa23.24■■□□□ 1.31
SLC6A1-205ENST00000495636 NRAPQ86VF7 1730 aa23.23■■□□□ 1.31
SLC6A1-205ENST00000495636 CRYBG1Q9Y4K1 1723 aa23.23■■□□□ 1.31
SLC6A1-205ENST00000495636 COL14A1Q05707 1796 aaKnown RBP23.23■■□□□ 1.31
SLC6A1-205ENST00000495636 PAK3O75914 559 aaPredicted RBP23.23■■□□□ 1.31
SLC6A1-205ENST00000495636 BRWD3Q6RI45 1802 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms