RNA–Protein interactions for RNA: ENST00000495465.6

RAPGEF3-214, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-214ENST00000495465 ESCO1Q5FWF5 840 aa21.51■■□□□ 1.03
RAPGEF3-214ENST00000495465 IFT172Q9UG01 1749 aa21.51■■□□□ 1.03
RAPGEF3-214ENST00000495465 PLEKHH1Q9ULM0 1364 aa21.5■■□□□ 1.03
RAPGEF3-214ENST00000495465 SHPRHQ149N8 1683 aa21.5■■□□□ 1.03
RAPGEF3-214ENST00000495465 TECPR2O15040 1411 aa21.49■■□□□ 1.03
RAPGEF3-214ENST00000495465 YTHDC2Q9H6S0 1430 aaKnown RBP21.49■■□□□ 1.03
RAPGEF3-214ENST00000495465 NHSL1Q5SYE7 1610 aa21.49■■□□□ 1.03
RAPGEF3-214ENST00000495465 ZNF772Q68DY9 489 aaPredicted RBP21.48■■□□□ 1.03
RAPGEF3-214ENST00000495465 KDM2AQ9Y2K7 1162 aa21.48■■□□□ 1.03
RAPGEF3-214ENST00000495465 DHX57Q6P158 1386 aaKnown RBP21.47■■□□□ 1.03
RAPGEF3-214ENST00000495465 PNPLA6Q8IY17 1366 aa21.47■■□□□ 1.03
RAPGEF3-214ENST00000495465 SOS2Q07890 1332 aaPredicted RBP21.46■■□□□ 1.03
RAPGEF3-214ENST00000495465 NRXN1Q9ULB1 1477 aa21.45■■□□□ 1.03
RAPGEF3-214ENST00000495465 DCAF11Q8TEB1 546 aa21.45■■□□□ 1.02
RAPGEF3-214ENST00000495465 MYOM2P54296 1465 aa21.45■■□□□ 1.02
RAPGEF3-214ENST00000495465 SAFB2Q14151 953 aaKnown RBP eCLIP21.44■■□□□ 1.02
RAPGEF3-214ENST00000495465 SIRT1Q96EB6 747 aa21.44■■□□□ 1.02
RAPGEF3-214ENST00000495465 FOXO3O43524 673 aa21.43■■□□□ 1.02
RAPGEF3-214ENST00000495465 ADAMTS2O95450 1211 aa21.43■■□□□ 1.02
RAPGEF3-214ENST00000495465 XPCQ01831 940 aaPredicted RBP21.43■■□□□ 1.02
RAPGEF3-214ENST00000495465 C8orf37Q96NL8 207 aa21.43■■□□□ 1.02
RAPGEF3-214ENST00000495465 AFF2P51816 1311 aa21.43■■□□□ 1.02
RAPGEF3-214ENST00000495465 CDC42BPGQ6DT37 1551 aa21.42■■□□□ 1.02
RAPGEF3-214ENST00000495465 NPHP3Q7Z494 1330 aa21.42■■□□□ 1.02
RAPGEF3-214ENST00000495465 PRAM1Q96QH2 718 aa21.42■■□□□ 1.02
RAPGEF3-214ENST00000495465 POGKQ9P215 609 aa21.4■■□□□ 1.02
RAPGEF3-214ENST00000495465 RXRBP28702 533 aa21.38■■□□□ 1.01
RAPGEF3-214ENST00000495465 NGLY1Q96IV0 654 aa21.38■■□□□ 1.01
RAPGEF3-214ENST00000495465 TRAK1Q9UPV9 953 aa21.38■■□□□ 1.01
RAPGEF3-214ENST00000495465 KNDC1Q76NI1 1749 aa21.38■■□□□ 1.01
RAPGEF3-214ENST00000495465 LAMC1P11047 1609 aa21.37■■□□□ 1.01
RAPGEF3-214ENST00000495465 STAC3Q96MF2 364 aa21.35■■□□□ 1.01
RAPGEF3-214ENST00000495465 QTRT2Q9H974 415 aaKnown RBP21.34■■□□□ 1.01
RAPGEF3-214ENST00000495465 PXDNQ92626 1479 aa21.32■■□□□ 1
RAPGEF3-214ENST00000495465 KRT28Q7Z3Y7 464 aa21.32■■□□□ 1
RAPGEF3-214ENST00000495465 HIRIP3Q9BW71 556 aaPredicted RBP21.32■■□□□ 1
RAPGEF3-214ENST00000495465 PHF8Q9UPP1 1060 aa21.32■■□□□ 1
RAPGEF3-214ENST00000495465 ADGRB1O14514 1584 aa21.31■■□□□ 1
RAPGEF3-214ENST00000495465 MINK1Q8N4C8 1332 aaPredicted RBP21.29■■□□□ 1
RAPGEF3-214ENST00000495465 FMN2Q9NZ56 1722 aa21.29■■□□□ 1
RAPGEF3-214ENST00000495465 DLC1Q96QB1 1528 aa21.29■■□□□ 1
RAPGEF3-214ENST00000495465 USP21Q9UK80 565 aa21.28■■□□□ 1
RAPGEF3-214ENST00000495465 SPATA31A3Q5VYP0 1347 aa21.28■■□□□ 1
RAPGEF3-214ENST00000495465 RBM6P78332 1123 aaKnown RBP21.27■■□□□ 1
RAPGEF3-214ENST00000495465 PMFBP1Q8TBY8 1022 aa21.27■■□□□ 1
RAPGEF3-214ENST00000495465 PSME1Q06323 249 aa21.26■□□□□ 0.99
RAPGEF3-214ENST00000495465 PLEKHG5O94827 1062 aa21.25■□□□□ 0.99
RAPGEF3-214ENST00000495465 FNBP4Q8N3X1 1017 aaPredicted RBP21.25■□□□□ 0.99
RAPGEF3-214ENST00000495465 LMOD2Q6P5Q4 547 aa21.24■□□□□ 0.99
RAPGEF3-214ENST00000495465 COL22A1Q8NFW1 1626 aaPredicted RBP21.22■□□□□ 0.99
RAPGEF3-214ENST00000495465 WASLO00401 505 aaPredicted RBP21.22■□□□□ 0.99
RAPGEF3-214ENST00000495465 TRPC5Q9UL62 973 aaPredicted RBP21.22■□□□□ 0.99
RAPGEF3-214ENST00000495465 KIF1AQ12756 1690 aa21.21■□□□□ 0.99
RAPGEF3-214ENST00000495465 CDK12Q9NYV4 1490 aaPredicted RBP21.21■□□□□ 0.99
RAPGEF3-214ENST00000495465 UPF1Q92900 1129 aaKnown RBP eCLIP21.21■□□□□ 0.99
RAPGEF3-214ENST00000495465 ANKARQ7Z5J8 1434 aa21.21■□□□□ 0.99
RAPGEF3-214ENST00000495465 HAP1P54257 671 aaPredicted RBP21.2■□□□□ 0.98
RAPGEF3-214ENST00000495465 CABLES1Q8TDN4 633 aa21.2■□□□□ 0.98
RAPGEF3-214ENST00000495465 PRR36Q9H6K5 1346 aa21.2■□□□□ 0.98
RAPGEF3-214ENST00000495465 RGPD8O14715 1765 aaPredicted RBP21.19■□□□□ 0.98
RAPGEF3-214ENST00000495465 NBPF1Q3BBV0 1214 aa21.19■□□□□ 0.98
RAPGEF3-214ENST00000495465 TNS3Q68CZ2 1445 aa21.19■□□□□ 0.98
RAPGEF3-214ENST00000495465 RGS12O14924 1447 aa21.18■□□□□ 0.98
RAPGEF3-214ENST00000495465 SIN3AQ96ST3 1273 aa21.17■□□□□ 0.98
RAPGEF3-214ENST00000495465 SBNO1A3KN83 1393 aa21.17■□□□□ 0.98
RAPGEF3-214ENST00000495465 EIF3AQ14152 1382 aaKnown RBP21.17■□□□□ 0.98
RAPGEF3-214ENST00000495465 ADGRB2O60241 1585 aa21.17■□□□□ 0.98
RAPGEF3-214ENST00000495465 NGDNQ8NEJ9 315 aaKnown RBP21.16■□□□□ 0.98
RAPGEF3-214ENST00000495465 BCL9LQ86UU0 1499 aa21.15■□□□□ 0.98
RAPGEF3-214ENST00000495465 ATRNO75882 1429 aa21.15■□□□□ 0.98
RAPGEF3-214ENST00000495465 NEUROD1Q13562 356 aa21.15■□□□□ 0.98
RAPGEF3-214ENST00000495465 USP32Q8NFA0 1604 aa21.15■□□□□ 0.98
RAPGEF3-214ENST00000495465 GPRASP1Q5JY77 1395 aa21.14■□□□□ 0.98
RAPGEF3-214ENST00000495465 L3MBTL2Q969R5 705 aa21.14■□□□□ 0.97
RAPGEF3-214ENST00000495465 NUDT16Q96DE0 195 aaKnown RBP21.14■□□□□ 0.97
RAPGEF3-214ENST00000495465 CDK19Q9BWU1 502 aa21.14■□□□□ 0.97
RAPGEF3-214ENST00000495465 ARHGEF10O15013 1369 aa21.13■□□□□ 0.97
RAPGEF3-214ENST00000495465 TULP4Q9NRJ4 1543 aa21.13■□□□□ 0.97
RAPGEF3-214ENST00000495465 UNC5CLQ8IV45 518 aa21.12■□□□□ 0.97
RAPGEF3-214ENST00000495465 PAK3O75914 559 aaPredicted RBP21.11■□□□□ 0.97
RAPGEF3-214ENST00000495465 GJD4Q96KN9 370 aaPredicted RBP21.11■□□□□ 0.97
RAPGEF3-214ENST00000495465 ARHGEF28Q8N1W1 1705 aaKnown RBP21.09■□□□□ 0.97
RAPGEF3-214ENST00000495465 SLIT2O94813 1529 aa21.08■□□□□ 0.96
RAPGEF3-214ENST00000495465 FAM83GA6ND36 823 aa21.06■□□□□ 0.96
RAPGEF3-214ENST00000495465 MARF1Q9Y4F3 1742 aaKnown RBP21.06■□□□□ 0.96
RAPGEF3-214ENST00000495465 ATP7BP35670 1465 aa21.06■□□□□ 0.96
RAPGEF3-214ENST00000495465 CENPJQ9HC77 1338 aaPredicted RBP21.05■□□□□ 0.96
RAPGEF3-214ENST00000495465 KIAA1210Q9ULL0 1709 aa21.05■□□□□ 0.96
RAPGEF3-214ENST00000495465 CCDC61Q9Y6R9 512 aa21.05■□□□□ 0.96
RAPGEF3-214ENST00000495465 EP400Q96L91 3159 aa21.04■□□□□ 0.96
RAPGEF3-214ENST00000495465 SRPK2P78362 688 aaKnown RBP21.04■□□□□ 0.96
RAPGEF3-214ENST00000495465 CCDC9Q9Y3X0 531 aaKnown RBP21.04■□□□□ 0.96
RAPGEF3-214ENST00000495465 ATAD2Q6PL18 1390 aa21.04■□□□□ 0.96
RAPGEF3-214ENST00000495465 ACEP12821 1306 aa21.03■□□□□ 0.96
RAPGEF3-214ENST00000495465 RALGAPBQ86X10 1494 aa21.02■□□□□ 0.96
RAPGEF3-214ENST00000495465 NBPF8Q3BBV2 869 aa21.02■□□□□ 0.96
RAPGEF3-214ENST00000495465 CABP2Q9NPB3 220 aa21.02■□□□□ 0.96
RAPGEF3-214ENST00000495465 VPS72Q15906 364 aa21.01■□□□□ 0.95
RAPGEF3-214ENST00000495465 NUTM2GQ5VZR2 741 aa21.01■□□□□ 0.95
RAPGEF3-214ENST00000495465 TRPM3Q9HCF6 1732 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms