RNA–Protein interactions for RNA: ENST00000495212.1

HDGF-209, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-209ENST00000495212 CFAP70Q5T0N1 1121 aa29.46■■■□□ 2.31
HDGF-209ENST00000495212 TECPR2O15040 1411 aa29.45■■■□□ 2.3
HDGF-209ENST00000495212 PNPLA6Q8IY17 1366 aa29.44■■■□□ 2.3
HDGF-209ENST00000495212 KNDC1Q76NI1 1749 aa29.44■■■□□ 2.3
HDGF-209ENST00000495212 YTHDC2Q9H6S0 1430 aaKnown RBP29.44■■■□□ 2.3
HDGF-209ENST00000495212 ABCC11Q96J66 1382 aa29.43■■■□□ 2.3
HDGF-209ENST00000495212 C14orf93Q9H972 538 aaKnown RBP29.43■■■□□ 2.3
HDGF-209ENST00000495212 CDC42BPGQ6DT37 1551 aa29.42■■■□□ 2.3
HDGF-209ENST00000495212 NRXN1Q9ULB1 1477 aa29.42■■■□□ 2.3
HDGF-209ENST00000495212 MYOM2P54296 1465 aa29.41■■■□□ 2.3
HDGF-209ENST00000495212 ESCO1Q5FWF5 840 aa29.4■■■□□ 2.3
HDGF-209ENST00000495212 LAMC1P11047 1609 aa29.4■■■□□ 2.3
HDGF-209ENST00000495212 SOS2Q07890 1332 aaPredicted RBP29.39■■■□□ 2.3
HDGF-209ENST00000495212 KDM2AQ9Y2K7 1162 aa29.37■■■□□ 2.29
HDGF-209ENST00000495212 XPCQ01831 940 aaPredicted RBP29.35■■■□□ 2.29
HDGF-209ENST00000495212 ZNF772Q68DY9 489 aaPredicted RBP29.35■■■□□ 2.29
HDGF-209ENST00000495212 AFF2P51816 1311 aa29.35■■■□□ 2.29
HDGF-209ENST00000495212 SAFB2Q14151 953 aaKnown RBP eCLIP29.34■■■□□ 2.29
HDGF-209ENST00000495212 C8orf37Q96NL8 207 aa29.34■■■□□ 2.29
HDGF-209ENST00000495212 DHX57Q6P158 1386 aaKnown RBP29.33■■■□□ 2.29
HDGF-209ENST00000495212 FOXO3O43524 673 aa29.32■■■□□ 2.28
HDGF-209ENST00000495212 ADAMTS2O95450 1211 aa29.32■■■□□ 2.28
HDGF-209ENST00000495212 HRCP23327 699 aa29.32■■■□□ 2.28
HDGF-209ENST00000495212 FMN2Q9NZ56 1722 aa29.31■■■□□ 2.28
HDGF-209ENST00000495212 DCAF11Q8TEB1 546 aa29.31■■■□□ 2.28
HDGF-209ENST00000495212 PRAM1Q96QH2 718 aa29.29■■■□□ 2.28
HDGF-209ENST00000495212 RGPD8O14715 1765 aaPredicted RBP29.29■■■□□ 2.28
HDGF-209ENST00000495212 SIRT1Q96EB6 747 aa29.28■■■□□ 2.28
HDGF-209ENST00000495212 PXDNQ92626 1479 aa29.28■■■□□ 2.28
HDGF-209ENST00000495212 NPHP3Q7Z494 1330 aa29.27■■■□□ 2.28
HDGF-209ENST00000495212 ADGRB1O14514 1584 aa29.25■■■□□ 2.27
HDGF-209ENST00000495212 RXRBP28702 533 aa29.24■■■□□ 2.27
HDGF-209ENST00000495212 TRAK1Q9UPV9 953 aa29.24■■■□□ 2.27
HDGF-209ENST00000495212 NGLY1Q96IV0 654 aa29.22■■■□□ 2.27
HDGF-209ENST00000495212 COL22A1Q8NFW1 1626 aaPredicted RBP29.21■■■□□ 2.27
HDGF-209ENST00000495212 POGKQ9P215 609 aa29.21■■■□□ 2.27
HDGF-209ENST00000495212 QTRT2Q9H974 415 aaKnown RBP29.2■■■□□ 2.26
HDGF-209ENST00000495212 DLC1Q96QB1 1528 aa29.2■■■□□ 2.26
HDGF-209ENST00000495212 HIRIP3Q9BW71 556 aaPredicted RBP29.18■■■□□ 2.26
HDGF-209ENST00000495212 KIF1AQ12756 1690 aa29.16■■■□□ 2.26
HDGF-209ENST00000495212 KRT28Q7Z3Y7 464 aa29.16■■■□□ 2.26
HDGF-209ENST00000495212 PHF8Q9UPP1 1060 aa29.15■■■□□ 2.26
HDGF-209ENST00000495212 MINK1Q8N4C8 1332 aaPredicted RBP29.15■■■□□ 2.26
HDGF-209ENST00000495212 USP32Q8NFA0 1604 aa29.13■■■□□ 2.25
HDGF-209ENST00000495212 PLEKHG5O94827 1062 aa29.12■■■□□ 2.25
HDGF-209ENST00000495212 USP21Q9UK80 565 aa29.12■■■□□ 2.25
HDGF-209ENST00000495212 SPATA31A3Q5VYP0 1347 aa29.12■■■□□ 2.25
HDGF-209ENST00000495212 PMFBP1Q8TBY8 1022 aa29.11■■■□□ 2.25
HDGF-209ENST00000495212 RBM6P78332 1123 aaKnown RBP29.1■■■□□ 2.25
HDGF-209ENST00000495212 RGS12O14924 1447 aa29.09■■■□□ 2.25
HDGF-209ENST00000495212 ADGRB2O60241 1585 aa29.09■■■□□ 2.25
HDGF-209ENST00000495212 MARF1Q9Y4F3 1742 aaKnown RBP29.08■■■□□ 2.25
HDGF-209ENST00000495212 FNBP4Q8N3X1 1017 aaPredicted RBP29.08■■■□□ 2.25
HDGF-209ENST00000495212 UPF1Q92900 1129 aaKnown RBP eCLIP29.07■■■□□ 2.241e-34■■■■□ 26
HDGF-209ENST00000495212 CDK12Q9NYV4 1490 aaPredicted RBP29.07■■■□□ 2.24
HDGF-209ENST00000495212 PRR36Q9H6K5 1346 aa29.06■■■□□ 2.24
HDGF-209ENST00000495212 STAC3Q96MF2 364 aa29.06■■■□□ 2.24
HDGF-209ENST00000495212 ARHGEF28Q8N1W1 1705 aaKnown RBP29.06■■■□□ 2.24
HDGF-209ENST00000495212 CABLES1Q8TDN4 633 aa29.04■■■□□ 2.24
HDGF-209ENST00000495212 PSME1Q06323 249 aa29.03■■■□□ 2.24
HDGF-209ENST00000495212 TRPC5Q9UL62 973 aaPredicted RBP29.03■■■□□ 2.24
HDGF-209ENST00000495212 ANKARQ7Z5J8 1434 aa29.03■■■□□ 2.24
HDGF-209ENST00000495212 LMOD2Q6P5Q4 547 aa29.02■■■□□ 2.24
HDGF-209ENST00000495212 TNS3Q68CZ2 1445 aa29.02■■■□□ 2.24
HDGF-209ENST00000495212 WASLO00401 505 aaPredicted RBP29.01■■■□□ 2.23
HDGF-209ENST00000495212 BCL9LQ86UU0 1499 aa29.01■■■□□ 2.23
HDGF-209ENST00000495212 ATRNO75882 1429 aa29.01■■■□□ 2.23
HDGF-209ENST00000495212 NBPF1Q3BBV0 1214 aa29■■■□□ 2.23
HDGF-209ENST00000495212 TULP4Q9NRJ4 1543 aa28.98■■■□□ 2.23
HDGF-209ENST00000495212 SIN3AQ96ST3 1273 aa28.97■■■□□ 2.23
HDGF-209ENST00000495212 SBNO1A3KN83 1393 aa28.97■■■□□ 2.23
HDGF-209ENST00000495212 HAP1P54257 671 aaPredicted RBP28.95■■■□□ 2.22
HDGF-209ENST00000495212 TRPM3Q9HCF6 1732 aaPredicted RBP28.94■■■□□ 2.22
HDGF-209ENST00000495212 KIAA1210Q9ULL0 1709 aa28.94■■■□□ 2.22
HDGF-209ENST00000495212 ABCA3Q99758 1704 aa28.94■■■□□ 2.22
HDGF-209ENST00000495212 SLIT2O94813 1529 aa28.91■■■□□ 2.22
HDGF-209ENST00000495212 EIF3AQ14152 1382 aaKnown RBP28.9■■■□□ 2.22
HDGF-209ENST00000495212 L3MBTL2Q969R5 705 aa28.9■■■□□ 2.22
HDGF-209ENST00000495212 NUDT16Q96DE0 195 aaKnown RBP28.9■■■□□ 2.22
HDGF-209ENST00000495212 CDK19Q9BWU1 502 aa28.9■■■□□ 2.22
HDGF-209ENST00000495212 NGDNQ8NEJ9 315 aaKnown RBP28.89■■■□□ 2.22
HDGF-209ENST00000495212 GJD4Q96KN9 370 aaPredicted RBP28.89■■■□□ 2.22
HDGF-209ENST00000495212 ATP7BP35670 1465 aa28.89■■■□□ 2.22
HDGF-209ENST00000495212 ARHGEF10O15013 1369 aa28.88■■■□□ 2.21
HDGF-209ENST00000495212 NEUROD1Q13562 356 aa28.88■■■□□ 2.21
HDGF-209ENST00000495212 UNC5CLQ8IV45 518 aa28.88■■■□□ 2.21
HDGF-209ENST00000495212 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.88■■■□□ 2.21
HDGF-209ENST00000495212 GPRASP1Q5JY77 1395 aa28.88■■■□□ 2.21
HDGF-209ENST00000495212 ALS2Q96Q42 1657 aa28.87■■■□□ 2.21
HDGF-209ENST00000495212 PLCH1Q4KWH8 1693 aa28.86■■■□□ 2.21
HDGF-209ENST00000495212 GLI3P10071 1580 aa28.85■■■□□ 2.21
HDGF-209ENST00000495212 PAK3O75914 559 aaPredicted RBP28.85■■■□□ 2.21
HDGF-209ENST00000495212 ITSN1Q15811 1721 aa28.84■■■□□ 2.21
HDGF-209ENST00000495212 FAM83GA6ND36 823 aa28.83■■■□□ 2.21
HDGF-209ENST00000495212 RALGAPBQ86X10 1494 aa28.83■■■□□ 2.21
HDGF-209ENST00000495212 ATAD2Q6PL18 1390 aa28.79■■■□□ 2.2
HDGF-209ENST00000495212 TOPAZ1Q8N9V7 1692 aa28.79■■■□□ 2.2
HDGF-209ENST00000495212 CENPJQ9HC77 1338 aaPredicted RBP28.77■■■□□ 2.2
HDGF-209ENST00000495212 NWD2Q9ULI1 1742 aa28.77■■■□□ 2.2
HDGF-209ENST00000495212 CRYBG1Q9Y4K1 1723 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms