RNA–Protein interactions for RNA: ENST00000495198.6

SREK1IP1-201, Transcript of SREK1 interacting protein 1, humanhuman

TSL 3

Gene SREK1IP1, Length 816 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1-201ENST00000495198 CTC1Q2NKJ3 1217 aa13.54□□□□□ -0.24
SREK1IP1-201ENST00000495198 C11orf95C9JLR9 678 aaPredicted RBP13.52□□□□□ -0.25
SREK1IP1-201ENST00000495198 WFS1O76024 890 aa13.52□□□□□ -0.25
SREK1IP1-201ENST00000495198 WNT7AO00755 349 aa13.5□□□□□ -0.25
SREK1IP1-201ENST00000495198 J3QL48 77 aa13.49□□□□□ -0.25
SREK1IP1-201ENST00000495198 SNRPBP14678 240 aaKnown RBP13.49□□□□□ -0.25
SREK1IP1-201ENST00000495198 MMP16P51512 607 aa13.49□□□□□ -0.25
SREK1IP1-201ENST00000495198 TRIM32Q13049 653 aa13.49□□□□□ -0.25
SREK1IP1-201ENST00000495198 TTC24A2A3L6 582 aaPredicted RBP13.47□□□□□ -0.25
SREK1IP1-201ENST00000495198 SULF1Q8IWU6 871 aa13.47□□□□□ -0.25
SREK1IP1-201ENST00000495198 HLA-CQ95604 372 aa13.47□□□□□ -0.25
SREK1IP1-201ENST00000495198 MRGPRX2Q96LB1 330 aa13.47□□□□□ -0.25
SREK1IP1-201ENST00000495198 ATP13A2Q9NQ11 1180 aa13.47□□□□□ -0.25
SREK1IP1-201ENST00000495198 ABCC9O60706 1549 aa13.46□□□□□ -0.25
SREK1IP1-201ENST00000495198 WIPF1O43516 503 aa13.45□□□□□ -0.26
SREK1IP1-201ENST00000495198 SNIP1Q8TAD8 396 aaKnown RBP13.45□□□□□ -0.26
SREK1IP1-201ENST00000495198 CD46P15529 392 aa13.44□□□□□ -0.26
SREK1IP1-201ENST00000495198 DXOO77932 396 aaKnown RBP13.43□□□□□ -0.26
SREK1IP1-201ENST00000495198 HPS1Q92902 700 aa13.43□□□□□ -0.26
SREK1IP1-201ENST00000495198 SKOR1P84550 965 aa13.42□□□□□ -0.26
SREK1IP1-201ENST00000495198 ZBTB24O43167 697 aaPredicted RBP13.41□□□□□ -0.26
SREK1IP1-201ENST00000495198 SMYD5Q6GMV2 418 aa13.39□□□□□ -0.27
SREK1IP1-201ENST00000495198 TRIM47Q96LD4 638 aa13.39□□□□□ -0.27
SREK1IP1-201ENST00000495198 GPIHBP1Q8IV16 184 aa13.37□□□□□ -0.27
SREK1IP1-201ENST00000495198 USB1Q9BQ65 265 aaKnown RBP13.37□□□□□ -0.27
SREK1IP1-201ENST00000495198 Q3C1V9 767 aa13.35□□□□□ -0.27
SREK1IP1-201ENST00000495198 TERTO14746 1132 aaKnown RBP13.34□□□□□ -0.27
SREK1IP1-201ENST00000495198 GUCA2AQ02747 115 aa13.34□□□□□ -0.27
SREK1IP1-201ENST00000495198 STK17AQ9UEE5 414 aa13.34□□□□□ -0.27
SREK1IP1-201ENST00000495198 KDM4AO75164 1064 aa13.33□□□□□ -0.28
SREK1IP1-201ENST00000495198 GRIPAP1Q4V328 841 aa13.33□□□□□ -0.28
SREK1IP1-201ENST00000495198 RC3H1Q5TC82 1133 aaKnown RBP13.33□□□□□ -0.28
SREK1IP1-201ENST00000495198 HOXA2O43364 376 aa13.3□□□□□ -0.28
SREK1IP1-201ENST00000495198 SYMPKQ92797 1274 aaKnown RBP13.29□□□□□ -0.28
SREK1IP1-201ENST00000495198 MDM2Q00987 491 aaPredicted RBP13.28□□□□□ -0.28
SREK1IP1-201ENST00000495198 MAP2K5Q13163 448 aa13.28□□□□□ -0.28
SREK1IP1-201ENST00000495198 CCDC24Q8N4L8 307 aa13.28□□□□□ -0.28
SREK1IP1-201ENST00000495198 PLCB2Q00722 1185 aa13.27□□□□□ -0.29
SREK1IP1-201ENST00000495198 PTCRAQ6ISU1 281 aaPredicted RBP13.27□□□□□ -0.29
SREK1IP1-201ENST00000495198 REPIN1Q9BWE0 567 aaKnown RBP13.27□□□□□ -0.29
SREK1IP1-201ENST00000495198 SIAH2O43255 324 aa13.26□□□□□ -0.29
SREK1IP1-201ENST00000495198 LORP23490 312 aaPredicted RBP13.26□□□□□ -0.29
SREK1IP1-201ENST00000495198 WNT7BP56706 349 aa13.26□□□□□ -0.29
SREK1IP1-201ENST00000495198 SENP2Q9HC62 589 aa13.26□□□□□ -0.29
SREK1IP1-201ENST00000495198 INSM1Q01101 510 aaPredicted RBP13.25□□□□□ -0.29
SREK1IP1-201ENST00000495198 TRIM46Q7Z4K8 759 aa13.24□□□□□ -0.29
SREK1IP1-201ENST00000495198 IRF6O14896 467 aa13.23□□□□□ -0.29
SREK1IP1-201ENST00000495198 JUNDP17535 347 aa13.23□□□□□ -0.29
SREK1IP1-201ENST00000495198 ALDH1A1P00352 501 aa13.21□□□□□ -0.29
SREK1IP1-201ENST00000495198 BMP1P13497 986 aa13.21□□□□□ -0.29
SREK1IP1-201ENST00000495198 USP46P62068 366 aa13.21□□□□□ -0.29
SREK1IP1-201ENST00000495198 KIFC2Q96AC6 838 aa13.2□□□□□ -0.3
SREK1IP1-201ENST00000495198 PCDHGC3Q9UN70 934 aa13.18□□□□□ -0.3
SREK1IP1-201ENST00000495198 KDM2AQ9Y2K7 1162 aa13.18□□□□□ -0.3
SREK1IP1-201ENST00000495198 CCDC102AQ96A19 550 aa13.17□□□□□ -0.3
SREK1IP1-201ENST00000495198 FAM217BQ9NTX9 383 aaPredicted RBP13.17□□□□□ -0.3
SREK1IP1-201ENST00000495198 GMPRP36959 345 aa13.15□□□□□ -0.3
SREK1IP1-201ENST00000495198 NUDT12Q9BQG2 462 aa13.15□□□□□ -0.3
SREK1IP1-201ENST00000495198 SH3BP2P78314 561 aa13.14□□□□□ -0.31
SREK1IP1-201ENST00000495198 VEGFBP49765 207 aa13.13□□□□□ -0.31
SREK1IP1-201ENST00000495198 RETREG3Q86VR2 466 aa13.13□□□□□ -0.31
SREK1IP1-201ENST00000495198 NXF1Q9UBU9 619 aaKnown RBP13.12□□□□□ -0.31
SREK1IP1-201ENST00000495198 MINK1Q8N4C8 1332 aaPredicted RBP13.12□□□□□ -0.31
SREK1IP1-201ENST00000495198 ERBB4Q15303 1308 aa13.11□□□□□ -0.31
SREK1IP1-201ENST00000495198 CCDC180Q9P1Z9 1646 aa13.1□□□□□ -0.31
SREK1IP1-201ENST00000495198 EHBP1Q8NDI1 1231 aa13.1□□□□□ -0.31
SREK1IP1-201ENST00000495198 GPCPD1Q9NPB8 672 aa13.1□□□□□ -0.31
SREK1IP1-201ENST00000495198 TLL2Q9Y6L7 1015 aa13.09□□□□□ -0.31
SREK1IP1-201ENST00000495198 CAPN5O15484 640 aaPredicted RBP13.08□□□□□ -0.32
SREK1IP1-201ENST00000495198 H3BM21 787 aa13.06□□□□□ -0.32
SREK1IP1-201ENST00000495198 FDX1P10109 184 aa13.05□□□□□ -0.32
SREK1IP1-201ENST00000495198 CCNYL3P0C7X3 344 aa13.04□□□□□ -0.32
SREK1IP1-201ENST00000495198 CLCN1P35523 988 aa13.04□□□□□ -0.32
SREK1IP1-201ENST00000495198 LINC01559Q495D7 138 aa13.04□□□□□ -0.32
SREK1IP1-201ENST00000495198 UNC93B1Q9H1C4 597 aa13.04□□□□□ -0.32
SREK1IP1-201ENST00000495198 ZFP42Q96MM3 310 aa13.03□□□□□ -0.32
SREK1IP1-201ENST00000495198 WASF2Q9Y6W5 498 aa13.03□□□□□ -0.32
SREK1IP1-201ENST00000495198 MS4A1P11836 297 aa13.02□□□□□ -0.33
SREK1IP1-201ENST00000495198 NDUFV2P19404 249 aa13.02□□□□□ -0.33
SREK1IP1-201ENST00000495198 SLC16A10Q8TF71 515 aa13.02□□□□□ -0.33
SREK1IP1-201ENST00000495198 NUTM1Q86Y26 1132 aa13.01□□□□□ -0.33
SREK1IP1-201ENST00000495198 NPAS3Q8IXF0 933 aa13.01□□□□□ -0.33
SREK1IP1-201ENST00000495198 SPIRE2Q8WWL2 714 aa13.01□□□□□ -0.33
SREK1IP1-201ENST00000495198 BAP1Q92560 729 aa13.01□□□□□ -0.33
SREK1IP1-201ENST00000495198 C6orf229H3BNL8 230 aa13□□□□□ -0.33
SREK1IP1-201ENST00000495198 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
SREK1IP1-201ENST00000495198 ZSCAN1Q8NBB4 408 aa13□□□□□ -0.33
SREK1IP1-201ENST00000495198 EVA1BQ9NVM1 165 aa13□□□□□ -0.33
SREK1IP1-201ENST00000495198 PTPRNQ16849 979 aa12.99□□□□□ -0.33
SREK1IP1-201ENST00000495198 IRF7Q92985 503 aa12.98□□□□□ -0.33
SREK1IP1-201ENST00000495198 MOXD2PA6NHM9 499 aa12.97□□□□□ -0.33
SREK1IP1-201ENST00000495198 SOBPA7XYQ1 873 aa12.97□□□□□ -0.33
SREK1IP1-201ENST00000495198 TIMP2P16035 220 aa12.96□□□□□ -0.33
SREK1IP1-201ENST00000495198 KCNH2Q12809 1159 aa12.96□□□□□ -0.33
SREK1IP1-201ENST00000495198 NNTQ13423 1086 aa12.96□□□□□ -0.33
SREK1IP1-201ENST00000495198 ZNF511Q8NB15 262 aa12.96□□□□□ -0.33
SREK1IP1-201ENST00000495198 KLF16Q9BXK1 252 aaPredicted RBP12.96□□□□□ -0.33
SREK1IP1-201ENST00000495198 PRR7Q8TB68 274 aa12.94□□□□□ -0.34
SREK1IP1-201ENST00000495198 SSTR3P32745 418 aaPredicted RBP12.93□□□□□ -0.34
SREK1IP1-201ENST00000495198 LOC100996750A0A140TA64 210 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms