RNA–Protein interactions for RNA: ENST00000495016.5

CDK11A-221, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 286 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-221ENST00000495016 CFAP70Q5T0N1 1121 aa17.13■□□□□ 0.33
CDK11A-221ENST00000495016 AFF2P51816 1311 aa17.13■□□□□ 0.33
CDK11A-221ENST00000495016 PIK3C2GO75747 1445 aa17.13■□□□□ 0.33
CDK11A-221ENST00000495016 C8orf37Q96NL8 207 aa17.12■□□□□ 0.33
CDK11A-221ENST00000495016 TECPR2O15040 1411 aa17.12■□□□□ 0.33
CDK11A-221ENST00000495016 NUTM2FA1L443 756 aa17.11■□□□□ 0.33
CDK11A-221ENST00000495016 FOXO3O43524 673 aa17.11■□□□□ 0.33
CDK11A-221ENST00000495016 NGLY1Q96IV0 654 aa17.11■□□□□ 0.33
CDK11A-221ENST00000495016 NPHP3Q7Z494 1330 aa17.11■□□□□ 0.33
CDK11A-221ENST00000495016 DHX57Q6P158 1386 aaKnown RBP17.11■□□□□ 0.33
CDK11A-221ENST00000495016 ADAMTS2O95450 1211 aa17.1■□□□□ 0.33
CDK11A-221ENST00000495016 QTRT2Q9H974 415 aaKnown RBP17.09■□□□□ 0.33
CDK11A-221ENST00000495016 PLEKHH1Q9ULM0 1364 aa17.09■□□□□ 0.33
CDK11A-221ENST00000495016 YTHDC2Q9H6S0 1430 aaKnown RBP17.09■□□□□ 0.33
CDK11A-221ENST00000495016 PPLO60437 1756 aa17.07■□□□□ 0.32
CDK11A-221ENST00000495016 STAC3Q96MF2 364 aa17.07■□□□□ 0.32
CDK11A-221ENST00000495016 KDM2AQ9Y2K7 1162 aa17.07■□□□□ 0.32
CDK11A-221ENST00000495016 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
CDK11A-221ENST00000495016 DCAF11Q8TEB1 546 aa17.06■□□□□ 0.32
CDK11A-221ENST00000495016 PRAM1Q96QH2 718 aa17.06■□□□□ 0.32
CDK11A-221ENST00000495016 SETD1AO15047 1707 aaKnown RBP17.06■□□□□ 0.32
CDK11A-221ENST00000495016 NALCNQ8IZF0 1738 aa17.06■□□□□ 0.32
CDK11A-221ENST00000495016 SHPRHQ149N8 1683 aa17.06■□□□□ 0.32
CDK11A-221ENST00000495016 RBM6P78332 1123 aaKnown RBP17.05■□□□□ 0.32
CDK11A-221ENST00000495016 POGKQ9P215 609 aa17.05■□□□□ 0.32
CDK11A-221ENST00000495016 NRXN1Q9ULB1 1477 aa17.05■□□□□ 0.32
CDK11A-221ENST00000495016 SAFB2Q14151 953 aaKnown RBP eCLIP17.04■□□□□ 0.32
CDK11A-221ENST00000495016 FNBP4Q8N3X1 1017 aaPredicted RBP17.03■□□□□ 0.32
CDK11A-221ENST00000495016 USP21Q9UK80 565 aa17.03■□□□□ 0.32
CDK11A-221ENST00000495016 MYOM2P54296 1465 aa17.03■□□□□ 0.32
CDK11A-221ENST00000495016 NHSL1Q5SYE7 1610 aa17.03■□□□□ 0.32
CDK11A-221ENST00000495016 KRT28Q7Z3Y7 464 aa17.02■□□□□ 0.32
CDK11A-221ENST00000495016 CDC42BPGQ6DT37 1551 aa17.02■□□□□ 0.31
CDK11A-221ENST00000495016 UPF1Q92900 1129 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDK11A-221ENST00000495016 PHF8Q9UPP1 1060 aa17.01■□□□□ 0.31
CDK11A-221ENST00000495016 TRAK1Q9UPV9 953 aa17.01■□□□□ 0.31
CDK11A-221ENST00000495016 PSME1Q06323 249 aa17■□□□□ 0.31
CDK11A-221ENST00000495016 TRPC5Q9UL62 973 aaPredicted RBP17■□□□□ 0.31
CDK11A-221ENST00000495016 CDK12Q9NYV4 1490 aaPredicted RBP16.99■□□□□ 0.31
CDK11A-221ENST00000495016 SPATA31A3Q5VYP0 1347 aa16.98■□□□□ 0.31
CDK11A-221ENST00000495016 PXDNQ92626 1479 aa16.98■□□□□ 0.31
CDK11A-221ENST00000495016 LAMC1P11047 1609 aa16.97■□□□□ 0.31
CDK11A-221ENST00000495016 HIRIP3Q9BW71 556 aaPredicted RBP16.95■□□□□ 0.3
CDK11A-221ENST00000495016 PMFBP1Q8TBY8 1022 aa16.94■□□□□ 0.3
CDK11A-221ENST00000495016 MINK1Q8N4C8 1332 aaPredicted RBP16.94■□□□□ 0.3
CDK11A-221ENST00000495016 IFT172Q9UG01 1749 aa16.93■□□□□ 0.3
CDK11A-221ENST00000495016 WASLO00401 505 aaPredicted RBP16.92■□□□□ 0.3
CDK11A-221ENST00000495016 HAP1P54257 671 aaPredicted RBP16.92■□□□□ 0.3
CDK11A-221ENST00000495016 LMOD2Q6P5Q4 547 aa16.92■□□□□ 0.3
CDK11A-221ENST00000495016 DLC1Q96QB1 1528 aa16.91■□□□□ 0.3
CDK11A-221ENST00000495016 SBNO1A3KN83 1393 aa16.9■□□□□ 0.3
CDK11A-221ENST00000495016 UNC5CLQ8IV45 518 aa16.9■□□□□ 0.3
CDK11A-221ENST00000495016 GJD4Q96KN9 370 aaPredicted RBP16.9■□□□□ 0.3
CDK11A-221ENST00000495016 ADGRB1O14514 1584 aa16.89■□□□□ 0.3
CDK11A-221ENST00000495016 RGS12O14924 1447 aa16.89■□□□□ 0.29
CDK11A-221ENST00000495016 ANKARQ7Z5J8 1434 aa16.89■□□□□ 0.29
CDK11A-221ENST00000495016 BCL9LQ86UU0 1499 aa16.89■□□□□ 0.29
CDK11A-221ENST00000495016 PLEKHG5O94827 1062 aa16.89■□□□□ 0.29
CDK11A-221ENST00000495016 CABLES1Q8TDN4 633 aa16.89■□□□□ 0.29
CDK11A-221ENST00000495016 EIF3AQ14152 1382 aaKnown RBP16.89■□□□□ 0.29
CDK11A-221ENST00000495016 ATRNO75882 1429 aa16.88■□□□□ 0.29
CDK11A-221ENST00000495016 KNDC1Q76NI1 1749 aa16.88■□□□□ 0.29
CDK11A-221ENST00000495016 ARHGEF10O15013 1369 aa16.88■□□□□ 0.29
CDK11A-221ENST00000495016 GPRASP1Q5JY77 1395 aa16.88■□□□□ 0.29
CDK11A-221ENST00000495016 NGDNQ8NEJ9 315 aaKnown RBP16.87■□□□□ 0.29
CDK11A-221ENST00000495016 PRR36Q9H6K5 1346 aa16.87■□□□□ 0.29
CDK11A-221ENST00000495016 TNS3Q68CZ2 1445 aa16.87■□□□□ 0.29
CDK11A-221ENST00000495016 COL22A1Q8NFW1 1626 aaPredicted RBP16.85■□□□□ 0.29
CDK11A-221ENST00000495016 ATAD2Q6PL18 1390 aa16.85■□□□□ 0.29
CDK11A-221ENST00000495016 FAM83GA6ND36 823 aa16.84■□□□□ 0.29
CDK11A-221ENST00000495016 NBPF1Q3BBV0 1214 aa16.84■□□□□ 0.29
CDK11A-221ENST00000495016 NUDT16Q96DE0 195 aaKnown RBP16.84■□□□□ 0.29
CDK11A-221ENST00000495016 CDK19Q9BWU1 502 aa16.84■□□□□ 0.29
CDK11A-221ENST00000495016 FMN2Q9NZ56 1722 aa16.84■□□□□ 0.29
CDK11A-221ENST00000495016 PAK3O75914 559 aaPredicted RBP16.82■□□□□ 0.28
CDK11A-221ENST00000495016 VPS72Q15906 364 aa16.82■□□□□ 0.28
CDK11A-221ENST00000495016 KIF1AQ12756 1690 aa16.81■□□□□ 0.28
CDK11A-221ENST00000495016 SLIT2O94813 1529 aa16.81■□□□□ 0.28
CDK11A-221ENST00000495016 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
CDK11A-221ENST00000495016 CCDC9Q9Y3X0 531 aaKnown RBP16.8■□□□□ 0.28
CDK11A-221ENST00000495016 CCDC61Q9Y6R9 512 aa16.8■□□□□ 0.28
CDK11A-221ENST00000495016 L3MBTL2Q969R5 705 aa16.79■□□□□ 0.28
CDK11A-221ENST00000495016 ADGRB2O60241 1585 aa16.78■□□□□ 0.28
CDK11A-221ENST00000495016 ONECUT3O60422 494 aaPredicted RBP16.78■□□□□ 0.28
CDK11A-221ENST00000495016 TULP4Q9NRJ4 1543 aa16.78■□□□□ 0.28
CDK11A-221ENST00000495016 PLEKHG3A1L390 1219 aa16.77■□□□□ 0.28
CDK11A-221ENST00000495016 NBPF8Q3BBV2 869 aa16.77■□□□□ 0.28
CDK11A-221ENST00000495016 SEPT12Q8IYM1 358 aa16.77■□□□□ 0.28
CDK11A-221ENST00000495016 RALGAPBQ86X10 1494 aa16.77■□□□□ 0.28
CDK11A-221ENST00000495016 SIN3AQ96ST3 1273 aa16.76■□□□□ 0.27
CDK11A-221ENST00000495016 BTG4Q9NY30 223 aa16.76■□□□□ 0.27
CDK11A-221ENST00000495016 NEUROD1Q13562 356 aa16.75■□□□□ 0.27
CDK11A-221ENST00000495016 ACEP12821 1306 aa16.74■□□□□ 0.27
CDK11A-221ENST00000495016 CENPJQ9HC77 1338 aaPredicted RBP16.74■□□□□ 0.27
CDK11A-221ENST00000495016 SRPK2P78362 688 aaKnown RBP16.74■□□□□ 0.27
CDK11A-221ENST00000495016 PRDM11Q9NQV5 511 aa16.73■□□□□ 0.27
CDK11A-221ENST00000495016 USP32Q8NFA0 1604 aa16.72■□□□□ 0.27
CDK11A-221ENST00000495016 NUTM2GQ5VZR2 741 aa16.71■□□□□ 0.27
CDK11A-221ENST00000495016 KRT27Q7Z3Y8 459 aa16.71■□□□□ 0.27
CDK11A-221ENST00000495016 CABP2Q9NPB3 220 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms