RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 WAPLQ7Z5K2 1190 aa17.35■□□□□ 0.37
RAPGEF3-213ENST00000494764 CDK12Q9NYV4 1490 aaPredicted RBP17.35■□□□□ 0.37
RAPGEF3-213ENST00000494764 PRAG1Q86YV5 1406 aa17.34■□□□□ 0.37
RAPGEF3-213ENST00000494764 ANKRD30BQ9BXX2 1392 aa17.33■□□□□ 0.36
RAPGEF3-213ENST00000494764 TMEM132EQ6IEE7 984 aa17.33■□□□□ 0.36
RAPGEF3-213ENST00000494764 USP21Q9UK80 565 aa17.33■□□□□ 0.36
RAPGEF3-213ENST00000494764 LAMC1P11047 1609 aa17.32■□□□□ 0.36
RAPGEF3-213ENST00000494764 NPHP3Q7Z494 1330 aa17.32■□□□□ 0.36
RAPGEF3-213ENST00000494764 ACIN1Q9UKV3 1341 aaKnown RBP17.32■□□□□ 0.36
RAPGEF3-213ENST00000494764 NUTM2FA1L443 756 aa17.32■□□□□ 0.36
RAPGEF3-213ENST00000494764 FOXO3O43524 673 aa17.32■□□□□ 0.36
RAPGEF3-213ENST00000494764 TRPC5Q9UL62 973 aaPredicted RBP17.3■□□□□ 0.36
RAPGEF3-213ENST00000494764 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
RAPGEF3-213ENST00000494764 LRPPRCP42704 1394 aaKnown RBP17.29■□□□□ 0.36
RAPGEF3-213ENST00000494764 FNBP4Q8N3X1 1017 aaPredicted RBP17.29■□□□□ 0.36
RAPGEF3-213ENST00000494764 ABCC11Q96J66 1382 aa17.28■□□□□ 0.36
RAPGEF3-213ENST00000494764 XPCQ01831 940 aaPredicted RBP17.28■□□□□ 0.36
RAPGEF3-213ENST00000494764 SIRT1Q96EB6 747 aa17.26■□□□□ 0.35
RAPGEF3-213ENST00000494764 RGS12O14924 1447 aa17.26■□□□□ 0.35
RAPGEF3-213ENST00000494764 CDC42BPGQ6DT37 1551 aa17.26■□□□□ 0.35
RAPGEF3-213ENST00000494764 IFT172Q9UG01 1749 aa17.26■□□□□ 0.35
RAPGEF3-213ENST00000494764 TECPR2O15040 1411 aa17.25■□□□□ 0.35
RAPGEF3-213ENST00000494764 C14orf93Q9H972 538 aaKnown RBP17.25■□□□□ 0.35
RAPGEF3-213ENST00000494764 YTHDC2Q9H6S0 1430 aaKnown RBP17.24■□□□□ 0.35
RAPGEF3-213ENST00000494764 PLEKHH1Q9ULM0 1364 aa17.24■□□□□ 0.35
RAPGEF3-213ENST00000494764 COL22A1Q8NFW1 1626 aaPredicted RBP17.23■□□□□ 0.35
RAPGEF3-213ENST00000494764 CFAP70Q5T0N1 1121 aa17.23■□□□□ 0.35
RAPGEF3-213ENST00000494764 KRT28Q7Z3Y7 464 aa17.23■□□□□ 0.35
RAPGEF3-213ENST00000494764 DHX57Q6P158 1386 aaKnown RBP17.23■□□□□ 0.35
RAPGEF3-213ENST00000494764 PIK3C2GO75747 1445 aa17.22■□□□□ 0.35
RAPGEF3-213ENST00000494764 PXDNQ92626 1479 aa17.22■□□□□ 0.35
RAPGEF3-213ENST00000494764 PSME1Q06323 249 aa17.21■□□□□ 0.35
RAPGEF3-213ENST00000494764 KNDC1Q76NI1 1749 aa17.21■□□□□ 0.35
RAPGEF3-213ENST00000494764 ATAD2Q6PL18 1390 aa17.2■□□□□ 0.34
RAPGEF3-213ENST00000494764 SPATA31A3Q5VYP0 1347 aa17.2■□□□□ 0.34
RAPGEF3-213ENST00000494764 MYOM2P54296 1465 aa17.19■□□□□ 0.34
RAPGEF3-213ENST00000494764 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
RAPGEF3-213ENST00000494764 GJD4Q96KN9 370 aaPredicted RBP17.19■□□□□ 0.34
RAPGEF3-213ENST00000494764 POGKQ9P215 609 aa17.19■□□□□ 0.34
RAPGEF3-213ENST00000494764 PHF8Q9UPP1 1060 aa17.19■□□□□ 0.34
RAPGEF3-213ENST00000494764 ATRNO75882 1429 aa17.19■□□□□ 0.34
RAPGEF3-213ENST00000494764 FMN2Q9NZ56 1722 aa17.18■□□□□ 0.34
RAPGEF3-213ENST00000494764 MARF1Q9Y4F3 1742 aaKnown RBP17.18■□□□□ 0.34
RAPGEF3-213ENST00000494764 HAP1P54257 671 aaPredicted RBP17.18■□□□□ 0.34
RAPGEF3-213ENST00000494764 RGPD8O14715 1765 aaPredicted RBP17.17■□□□□ 0.34
RAPGEF3-213ENST00000494764 PRAM1Q96QH2 718 aa17.17■□□□□ 0.34
RAPGEF3-213ENST00000494764 BCL9LQ86UU0 1499 aa17.17■□□□□ 0.34
RAPGEF3-213ENST00000494764 PLEKHG5O94827 1062 aa17.16■□□□□ 0.34
RAPGEF3-213ENST00000494764 LMOD2Q6P5Q4 547 aa17.16■□□□□ 0.34
RAPGEF3-213ENST00000494764 UNC5CLQ8IV45 518 aa17.16■□□□□ 0.34
RAPGEF3-213ENST00000494764 KDM2AQ9Y2K7 1162 aa17.15■□□□□ 0.34
RAPGEF3-213ENST00000494764 KIF1AQ12756 1690 aa17.15■□□□□ 0.34
RAPGEF3-213ENST00000494764 CCDC125Q86Z20 511 aa17.14■□□□□ 0.33
RAPGEF3-213ENST00000494764 RAB3GAP2Q9H2M9 1393 aa17.14■□□□□ 0.33
RAPGEF3-213ENST00000494764 NRXN1Q9ULB1 1477 aa17.13■□□□□ 0.33
RAPGEF3-213ENST00000494764 PMFBP1Q8TBY8 1022 aa17.13■□□□□ 0.33
RAPGEF3-213ENST00000494764 CABLES1Q8TDN4 633 aa17.12■□□□□ 0.33
RAPGEF3-213ENST00000494764 DCAF11Q8TEB1 546 aa17.12■□□□□ 0.33
RAPGEF3-213ENST00000494764 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
RAPGEF3-213ENST00000494764 EP400Q96L91 3159 aa17.1■□□□□ 0.33
RAPGEF3-213ENST00000494764 HIRIP3Q9BW71 556 aaPredicted RBP17.09■□□□□ 0.33
RAPGEF3-213ENST00000494764 ZRANB1Q9UGI0 708 aa17.09■□□□□ 0.33
RAPGEF3-213ENST00000494764 CCDC9Q9Y3X0 531 aaKnown RBP17.09■□□□□ 0.33
RAPGEF3-213ENST00000494764 SBNO1A3KN83 1393 aa17.09■□□□□ 0.33
RAPGEF3-213ENST00000494764 TNS3Q68CZ2 1445 aa17.09■□□□□ 0.33
RAPGEF3-213ENST00000494764 SLIT2O94813 1529 aa17.08■□□□□ 0.32
RAPGEF3-213ENST00000494764 STAC3Q96MF2 364 aa17.08■□□□□ 0.32
RAPGEF3-213ENST00000494764 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.07■□□□□ 0.32
RAPGEF3-213ENST00000494764 DLC1Q96QB1 1528 aa17.07■□□□□ 0.32
RAPGEF3-213ENST00000494764 ARHGEF10O15013 1369 aa17.07■□□□□ 0.32
RAPGEF3-213ENST00000494764 MINK1Q8N4C8 1332 aaPredicted RBP17.07■□□□□ 0.32
RAPGEF3-213ENST00000494764 VPS72Q15906 364 aa17.07■□□□□ 0.32
RAPGEF3-213ENST00000494764 RALGAPBQ86X10 1494 aa17.06■□□□□ 0.32
RAPGEF3-213ENST00000494764 USP32Q8NFA0 1604 aa17.06■□□□□ 0.32
RAPGEF3-213ENST00000494764 ANKARQ7Z5J8 1434 aa17.05■□□□□ 0.32
RAPGEF3-213ENST00000494764 FAM83GA6ND36 823 aa17.05■□□□□ 0.32
RAPGEF3-213ENST00000494764 HRCP23327 699 aa17.05■□□□□ 0.32
RAPGEF3-213ENST00000494764 SEPT12Q8IYM1 358 aa17.05■□□□□ 0.32
RAPGEF3-213ENST00000494764 GPRASP1Q5JY77 1395 aa17.04■□□□□ 0.32
RAPGEF3-213ENST00000494764 WASLO00401 505 aaPredicted RBP17.04■□□□□ 0.32
RAPGEF3-213ENST00000494764 GLI3P10071 1580 aa17.03■□□□□ 0.32
RAPGEF3-213ENST00000494764 SF3B2Q13435 895 aaKnown RBP17.03■□□□□ 0.32
RAPGEF3-213ENST00000494764 NGDNQ8NEJ9 315 aaKnown RBP17.03■□□□□ 0.32
RAPGEF3-213ENST00000494764 SRCAPQ6ZRS2 3230 aa17.03■□□□□ 0.32
RAPGEF3-213ENST00000494764 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.32
RAPGEF3-213ENST00000494764 ONECUT3O60422 494 aaPredicted RBP17.02■□□□□ 0.32
RAPGEF3-213ENST00000494764 PAK3O75914 559 aaPredicted RBP17.02■□□□□ 0.32
RAPGEF3-213ENST00000494764 ADGRB1O14514 1584 aa17.02■□□□□ 0.31
RAPGEF3-213ENST00000494764 BRWD3Q6RI45 1802 aa17.01■□□□□ 0.31
RAPGEF3-213ENST00000494764 A0A0G2JS52 829 aa17■□□□□ 0.31
RAPGEF3-213ENST00000494764 MYT1Q01538 1121 aa17■□□□□ 0.31
RAPGEF3-213ENST00000494764 KRT27Q7Z3Y8 459 aa17■□□□□ 0.31
RAPGEF3-213ENST00000494764 BTG4Q9NY30 223 aa17■□□□□ 0.31
RAPGEF3-213ENST00000494764 NWD2Q9ULI1 1742 aa17■□□□□ 0.31
RAPGEF3-213ENST00000494764 PRR36Q9H6K5 1346 aa16.99■□□□□ 0.31
RAPGEF3-213ENST00000494764 ADGRB2O60241 1585 aa16.99■□□□□ 0.31
RAPGEF3-213ENST00000494764 PLCH1Q4KWH8 1693 aa16.99■□□□□ 0.31
RAPGEF3-213ENST00000494764 BLMP54132 1417 aaPredicted RBP16.98■□□□□ 0.31
RAPGEF3-213ENST00000494764 NUDT16Q96DE0 195 aaKnown RBP16.98■□□□□ 0.31
RAPGEF3-213ENST00000494764 DEFB132Q7Z7B7 95 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms