RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 NPHP3Q7Z494 1330 aa17.43■□□□□ 0.38
TRIM59-206ENST00000494486 ABCC5O15440 1437 aa17.42■□□□□ 0.38
TRIM59-206ENST00000494486 BRWD3Q6RI45 1802 aa17.42■□□□□ 0.38
TRIM59-206ENST00000494486 PPP1R1BQ9UD71 204 aaPredicted RBP17.4■□□□□ 0.38
TRIM59-206ENST00000494486 METP08581 1390 aa17.4■□□□□ 0.38
TRIM59-206ENST00000494486 ANKRD30AQ9BXX3 1397 aa17.39■□□□□ 0.37
TRIM59-206ENST00000494486 NINLQ9Y2I6 1382 aa17.39■□□□□ 0.37
TRIM59-206ENST00000494486 DISP2A7MBM2 1401 aa17.38■□□□□ 0.37
TRIM59-206ENST00000494486 CCDC9Q9Y3X0 531 aaKnown RBP17.38■□□□□ 0.37
TRIM59-206ENST00000494486 MARF1Q9Y4F3 1742 aaKnown RBP17.38■□□□□ 0.37
TRIM59-206ENST00000494486 EZH2Q15910 746 aaKnown RBP17.37■□□□□ 0.37
TRIM59-206ENST00000494486 A0A0G2JS52 829 aa17.35■□□□□ 0.37
TRIM59-206ENST00000494486 MYT1Q01538 1121 aa17.35■□□□□ 0.37
TRIM59-206ENST00000494486 SPON1Q9HCB6 807 aa17.35■□□□□ 0.37
TRIM59-206ENST00000494486 ESCO1Q5FWF5 840 aa17.34■□□□□ 0.37
TRIM59-206ENST00000494486 NALCNQ8IZF0 1738 aa17.34■□□□□ 0.37
TRIM59-206ENST00000494486 PXDNQ92626 1479 aa17.33■□□□□ 0.37
TRIM59-206ENST00000494486 LRPPRCP42704 1394 aaKnown RBP17.33■□□□□ 0.36
TRIM59-206ENST00000494486 CAMKK2Q96RR4 588 aa17.33■□□□□ 0.36
TRIM59-206ENST00000494486 FOXO3O43524 673 aa17.32■□□□□ 0.36
TRIM59-206ENST00000494486 CHIC2Q9UKJ5 165 aa17.32■□□□□ 0.36
TRIM59-206ENST00000494486 DAPK1P53355 1430 aa17.31■□□□□ 0.36
TRIM59-206ENST00000494486 KCNQ2O43526 872 aa17.31■□□□□ 0.36
TRIM59-206ENST00000494486 XPCQ01831 940 aaPredicted RBP17.31■□□□□ 0.36
TRIM59-206ENST00000494486 PARD3Q8TEW0 1356 aa17.3■□□□□ 0.36
TRIM59-206ENST00000494486 NRXN3Q9Y4C0 1643 aa17.3■□□□□ 0.36
TRIM59-206ENST00000494486 NBPF8Q3BBV2 869 aa17.3■□□□□ 0.36
TRIM59-206ENST00000494486 NBPF14Q5TI25 921 aa17.3■□□□□ 0.36
TRIM59-206ENST00000494486 PTPN23Q9H3S7 1636 aa17.29■□□□□ 0.36
TRIM59-206ENST00000494486 RGPD1P0DJD0 1748 aa17.29■□□□□ 0.36
TRIM59-206ENST00000494486 ADGRL2O95490 1459 aa17.29■□□□□ 0.36
TRIM59-206ENST00000494486 CROCC2H7BZ55 1655 aa17.29■□□□□ 0.36
TRIM59-206ENST00000494486 HAP1P54257 671 aaPredicted RBP17.28■□□□□ 0.36
TRIM59-206ENST00000494486 FAM98CQ17RN3 349 aaKnown RBP17.28■□□□□ 0.36
TRIM59-206ENST00000494486 SPATA31A3Q5VYP0 1347 aa17.27■□□□□ 0.36
TRIM59-206ENST00000494486 FAM182BQ5T319 152 aa17.26■□□□□ 0.35
TRIM59-206ENST00000494486 ROBO2Q9HCK4 1378 aa17.24■□□□□ 0.35
TRIM59-206ENST00000494486 USP32Q8NFA0 1604 aa17.23■□□□□ 0.35
TRIM59-206ENST00000494486 APBA3O96018 575 aa17.23■□□□□ 0.35
TRIM59-206ENST00000494486 ZNF326Q5BKZ1 582 aaKnown RBP17.23■□□□□ 0.35
TRIM59-206ENST00000494486 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
TRIM59-206ENST00000494486 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.35
TRIM59-206ENST00000494486 TRIM37O94972 964 aa17.21■□□□□ 0.35
TRIM59-206ENST00000494486 FAM196AQ6ZSG2 479 aa17.21■□□□□ 0.35
TRIM59-206ENST00000494486 HFM1A2PYH4 1435 aa17.21■□□□□ 0.34
TRIM59-206ENST00000494486 ADGRB2O60241 1585 aa17.19■□□□□ 0.34
TRIM59-206ENST00000494486 NWD2Q9ULI1 1742 aa17.19■□□□□ 0.34
TRIM59-206ENST00000494486 FAM83GA6ND36 823 aa17.19■□□□□ 0.34
TRIM59-206ENST00000494486 IQGAP3Q86VI3 1631 aa17.18■□□□□ 0.34
TRIM59-206ENST00000494486 GIGYF1O75420 1035 aaPredicted RBP17.18■□□□□ 0.34
TRIM59-206ENST00000494486 KRT28Q7Z3Y7 464 aa17.17■□□□□ 0.34
TRIM59-206ENST00000494486 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
TRIM59-206ENST00000494486 CABLES1Q8TDN4 633 aa17.17■□□□□ 0.34
TRIM59-206ENST00000494486 TNS1Q9HBL0 1735 aaKnown RBP17.17■□□□□ 0.34
TRIM59-206ENST00000494486 CAMTA1Q9Y6Y1 1673 aa17.16■□□□□ 0.34
TRIM59-206ENST00000494486 CCDC144AA2RUR9 1427 aa17.16■□□□□ 0.34
TRIM59-206ENST00000494486 PSME1Q06323 249 aa17.14■□□□□ 0.33
TRIM59-206ENST00000494486 E9PCH4 1651 aa17.13■□□□□ 0.33
TRIM59-206ENST00000494486 PLCH1Q4KWH8 1693 aa17.13■□□□□ 0.33
TRIM59-206ENST00000494486 BTG4Q9NY30 223 aa17.13■□□□□ 0.33
TRIM59-206ENST00000494486 CDC42BPGQ6DT37 1551 aa17.13■□□□□ 0.33
TRIM59-206ENST00000494486 SPATA31A5Q5VU36 1347 aa17.13■□□□□ 0.33
TRIM59-206ENST00000494486 SPATA31A7Q8IWB4 1347 aa17.13■□□□□ 0.33
TRIM59-206ENST00000494486 NUTM2FA1L443 756 aa17.11■□□□□ 0.33
TRIM59-206ENST00000494486 TNS3Q68CZ2 1445 aa17.11■□□□□ 0.33
TRIM59-206ENST00000494486 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
TRIM59-206ENST00000494486 VGFO15240 615 aaPredicted RBP17.09■□□□□ 0.33
TRIM59-206ENST00000494486 RREB1Q92766 1687 aa17.08■□□□□ 0.32
TRIM59-206ENST00000494486 ARHGEF10O15013 1369 aa17.08■□□□□ 0.32
TRIM59-206ENST00000494486 SYT17Q9BSW7 474 aa17.08■□□□□ 0.32
TRIM59-206ENST00000494486 NAIPQ13075 1403 aa17.07■□□□□ 0.32
TRIM59-206ENST00000494486 LMOD2Q6P5Q4 547 aa17.07■□□□□ 0.32
TRIM59-206ENST00000494486 SBNO1A3KN83 1393 aa17.06■□□□□ 0.32
TRIM59-206ENST00000494486 NUP188Q5SRE5 1749 aa17.06■□□□□ 0.32
TRIM59-206ENST00000494486 NEXMIFQ5QGS0 1516 aa17.06■□□□□ 0.32
TRIM59-206ENST00000494486 THSD7AQ9UPZ6 1657 aa17.05■□□□□ 0.32
TRIM59-206ENST00000494486 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
TRIM59-206ENST00000494486 PTGER2P43116 358 aa17.04■□□□□ 0.32
TRIM59-206ENST00000494486 FHDC1Q9C0D6 1143 aaPredicted RBP17.04■□□□□ 0.32
TRIM59-206ENST00000494486 NRAPQ86VF7 1730 aa17.03■□□□□ 0.32
TRIM59-206ENST00000494486 NUP155O75694 1391 aa17.02■□□□□ 0.32
TRIM59-206ENST00000494486 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.32
TRIM59-206ENST00000494486 PDE3BQ13370 1112 aa17.02■□□□□ 0.32
TRIM59-206ENST00000494486 PHF8Q9UPP1 1060 aa17.02■□□□□ 0.32
TRIM59-206ENST00000494486 RRBP1Q9P2E9 1410 aaKnown RBP17.02■□□□□ 0.31
TRIM59-206ENST00000494486 CHD4Q14839 1912 aa17.02■□□□□ 0.31
TRIM59-206ENST00000494486 SPATA31A1Q5TZJ5 1347 aa17.01■□□□□ 0.31
TRIM59-206ENST00000494486 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
TRIM59-206ENST00000494486 ZBTB7AO95365 584 aa17.01■□□□□ 0.31
TRIM59-206ENST00000494486 WAPLQ7Z5K2 1190 aa16.98■□□□□ 0.31
TRIM59-206ENST00000494486 ATF5Q9Y2D1 282 aaPredicted RBP16.98■□□□□ 0.31
TRIM59-206ENST00000494486 COL14A1Q05707 1796 aaKnown RBP16.97■□□□□ 0.31
TRIM59-206ENST00000494486 C11orf95C9JLR9 678 aaPredicted RBP16.97■□□□□ 0.31
TRIM59-206ENST00000494486 PLSCR1O15162 318 aa16.97■□□□□ 0.31
TRIM59-206ENST00000494486 GPR162Q16538 588 aa16.96■□□□□ 0.31
TRIM59-206ENST00000494486 PDGFDQ9GZP0 370 aaPredicted RBP16.96■□□□□ 0.31
TRIM59-206ENST00000494486 ANO8Q9HCE9 1232 aaPredicted RBP16.96■□□□□ 0.31
TRIM59-206ENST00000494486 RPGRIP1LQ68CZ1 1315 aa16.96■□□□□ 0.3
TRIM59-206ENST00000494486 HSPA6P17066 643 aa16.95■□□□□ 0.3
TRIM59-206ENST00000494486 BARGINQ6ZT62 677 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms