RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 TRIM26Q12899 539 aaPredicted RBP10.48□□□□□ -0.73
RBM39-239ENST00000494274 C1orf167Q5SNV9 1468 aa10.48□□□□□ -0.73
RBM39-239ENST00000494274 XPCQ01831 940 aaPredicted RBP10.47□□□□□ -0.73
RBM39-239ENST00000494274 HIRIP3Q9BW71 556 aaPredicted RBP10.47□□□□□ -0.73
RBM39-239ENST00000494274 SPATA31A6Q5VVP1 1343 aa10.47□□□□□ -0.73
RBM39-239ENST00000494274 MED1Q15648 1581 aaPredicted RBP10.47□□□□□ -0.73
RBM39-239ENST00000494274 XRN1Q8IZH2 1706 aaKnown RBP10.47□□□□□ -0.73
RBM39-239ENST00000494274 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.47□□□□□ -0.73
RBM39-239ENST00000494274 TECPR2O15040 1411 aa10.45□□□□□ -0.74
RBM39-239ENST00000494274 MINK1Q8N4C8 1332 aaPredicted RBP10.45□□□□□ -0.74
RBM39-239ENST00000494274 POTEAQ6S8J7 498 aa10.45□□□□□ -0.74
RBM39-239ENST00000494274 L3MBTL2Q969R5 705 aa10.45□□□□□ -0.74
RBM39-239ENST00000494274 MYOM2P54296 1465 aa10.44□□□□□ -0.74
RBM39-239ENST00000494274 NRXN1Q9ULB1 1477 aa10.44□□□□□ -0.74
RBM39-239ENST00000494274 PRAG1Q86YV5 1406 aa10.44□□□□□ -0.74
RBM39-239ENST00000494274 PPLO60437 1756 aa10.44□□□□□ -0.74
RBM39-239ENST00000494274 ASXL1Q8IXJ9 1541 aa10.43□□□□□ -0.74
RBM39-239ENST00000494274 SOS2Q07890 1332 aaPredicted RBP10.43□□□□□ -0.74
RBM39-239ENST00000494274 NPHP3Q7Z494 1330 aa10.43□□□□□ -0.74
RBM39-239ENST00000494274 ADAMTS2O95450 1211 aa10.43□□□□□ -0.74
RBM39-239ENST00000494274 NBPF1Q3BBV0 1214 aa10.43□□□□□ -0.74
RBM39-239ENST00000494274 PMFBP1Q8TBY8 1022 aa10.43□□□□□ -0.74
RBM39-239ENST00000494274 PLEKHG5O94827 1062 aa10.42□□□□□ -0.74
RBM39-239ENST00000494274 KRT28Q7Z3Y7 464 aa10.42□□□□□ -0.74
RBM39-239ENST00000494274 C8orf37Q96NL8 207 aa10.42□□□□□ -0.74
RBM39-239ENST00000494274 PHF8Q9UPP1 1060 aa10.42□□□□□ -0.74
RBM39-239ENST00000494274 PSME1Q06323 249 aa10.41□□□□□ -0.74
RBM39-239ENST00000494274 ZNF772Q68DY9 489 aaPredicted RBP10.41□□□□□ -0.74
RBM39-239ENST00000494274 LMOD2Q6P5Q4 547 aa10.41□□□□□ -0.74
RBM39-239ENST00000494274 NGLY1Q96IV0 654 aa10.41□□□□□ -0.74
RBM39-239ENST00000494274 PNPLA6Q8IY17 1366 aa10.4□□□□□ -0.74
RBM39-239ENST00000494274 WASLO00401 505 aaPredicted RBP10.4□□□□□ -0.74
RBM39-239ENST00000494274 PHLPP1O60346 1717 aa10.4□□□□□ -0.74
RBM39-239ENST00000494274 AHDC1Q5TGY3 1603 aaPredicted RBP10.4□□□□□ -0.75
RBM39-239ENST00000494274 COL16A1Q07092 1604 aaPredicted RBP10.39□□□□□ -0.75
RBM39-239ENST00000494274 SETD1AO15047 1707 aaKnown RBP10.38□□□□□ -0.75
RBM39-239ENST00000494274 AFF2P51816 1311 aa10.38□□□□□ -0.75
RBM39-239ENST00000494274 LRP6O75581 1613 aa10.38□□□□□ -0.75
RBM39-239ENST00000494274 HAP1P54257 671 aaPredicted RBP10.38□□□□□ -0.75
RBM39-239ENST00000494274 CDK19Q9BWU1 502 aa10.38□□□□□ -0.75
RBM39-239ENST00000494274 QTRT2Q9H974 415 aaKnown RBP10.38□□□□□ -0.75
RBM39-239ENST00000494274 RXRBP28702 533 aa10.37□□□□□ -0.75
RBM39-239ENST00000494274 NALCNQ8IZF0 1738 aa10.37□□□□□ -0.75
RBM39-239ENST00000494274 NGDNQ8NEJ9 315 aaKnown RBP10.37□□□□□ -0.75
RBM39-239ENST00000494274 NUDT16Q96DE0 195 aaKnown RBP10.37□□□□□ -0.75
RBM39-239ENST00000494274 SPATA31A3Q5VYP0 1347 aa10.36□□□□□ -0.75
RBM39-239ENST00000494274 ADGRB1O14514 1584 aa10.36□□□□□ -0.75
RBM39-239ENST00000494274 IFT172Q9UG01 1749 aa10.36□□□□□ -0.75
RBM39-239ENST00000494274 PRR36Q9H6K5 1346 aa10.35□□□□□ -0.75
RBM39-239ENST00000494274 CDC42BPGQ6DT37 1551 aa10.35□□□□□ -0.75
RBM39-239ENST00000494274 PAK3O75914 559 aaPredicted RBP10.35□□□□□ -0.75
RBM39-239ENST00000494274 SRPK2P78362 688 aaKnown RBP10.35□□□□□ -0.75
RBM39-239ENST00000494274 CABLES1Q8TDN4 633 aa10.35□□□□□ -0.75
RBM39-239ENST00000494274 USP21Q9UK80 565 aa10.35□□□□□ -0.75
RBM39-239ENST00000494274 CENPJQ9HC77 1338 aaPredicted RBP10.34□□□□□ -0.75
RBM39-239ENST00000494274 DLC1Q96QB1 1528 aa10.34□□□□□ -0.75
RBM39-239ENST00000494274 NBPF8Q3BBV2 869 aa10.34□□□□□ -0.75
RBM39-239ENST00000494274 PCGF6Q9BYE7 350 aa10.34□□□□□ -0.75
RBM39-239ENST00000494274 GPRASP1Q5JY77 1395 aa10.34□□□□□ -0.75
RBM39-239ENST00000494274 CABP2Q9NPB3 220 aa10.33□□□□□ -0.76
RBM39-239ENST00000494274 CCDC61Q9Y6R9 512 aa10.33□□□□□ -0.76
RBM39-239ENST00000494274 EIF3AQ14152 1382 aaKnown RBP10.33□□□□□ -0.76
RBM39-239ENST00000494274 TONSLQ96HA7 1378 aa10.33□□□□□ -0.76
RBM39-239ENST00000494274 ROCK2O75116 1388 aaKnown RBP10.32□□□□□ -0.76
RBM39-239ENST00000494274 FNBP4Q8N3X1 1017 aaPredicted RBP10.32□□□□□ -0.76
RBM39-239ENST00000494274 ANKARQ7Z5J8 1434 aa10.32□□□□□ -0.76
RBM39-239ENST00000494274 PXDNQ92626 1479 aa10.31□□□□□ -0.76
RBM39-239ENST00000494274 RBM6P78332 1123 aaKnown RBP10.31□□□□□ -0.76
RBM39-239ENST00000494274 CARD11Q9BXL7 1154 aa10.31□□□□□ -0.76
RBM39-239ENST00000494274 TRPC5Q9UL62 973 aaPredicted RBP10.31□□□□□ -0.76
RBM39-239ENST00000494274 LAMC1P11047 1609 aa10.31□□□□□ -0.76
RBM39-239ENST00000494274 ACEP12821 1306 aa10.3□□□□□ -0.76
RBM39-239ENST00000494274 NHSL1Q5SYE7 1610 aa10.29□□□□□ -0.76
RBM39-239ENST00000494274 SBNO1A3KN83 1393 aa10.29□□□□□ -0.76
RBM39-239ENST00000494274 NUTM2GQ5VZR2 741 aa10.29□□□□□ -0.76
RBM39-239ENST00000494274 CABP1Q9NZU7 370 aa10.29□□□□□ -0.76
RBM39-239ENST00000494274 KNDC1Q76NI1 1749 aa10.29□□□□□ -0.76
RBM39-239ENST00000494274 ARHGEF10O15013 1369 aa10.28□□□□□ -0.76
RBM39-239ENST00000494274 TNS3Q68CZ2 1445 aa10.28□□□□□ -0.76
RBM39-239ENST00000494274 PLEKHG3A1L390 1219 aa10.28□□□□□ -0.76
RBM39-239ENST00000494274 EVC2Q86UK5 1308 aa10.28□□□□□ -0.76
RBM39-239ENST00000494274 SHPRHQ149N8 1683 aa10.28□□□□□ -0.76
RBM39-239ENST00000494274 FAM83GA6ND36 823 aa10.27□□□□□ -0.77
RBM39-239ENST00000494274 UNC5CLQ8IV45 518 aa10.27□□□□□ -0.77
RBM39-239ENST00000494274 CCDC9Q9Y3X0 531 aaKnown RBP10.27□□□□□ -0.77
RBM39-239ENST00000494274 ABTB2Q8N961 1025 aa10.26□□□□□ -0.77
RBM39-239ENST00000494274 GJD4Q96KN9 370 aaPredicted RBP10.26□□□□□ -0.77
RBM39-239ENST00000494274 FMN2Q9NZ56 1722 aa10.26□□□□□ -0.77
RBM39-239ENST00000494274 TULP4Q9NRJ4 1543 aa10.26□□□□□ -0.77
RBM39-239ENST00000494274 ZC3H6P61129 1189 aaKnown RBP10.25□□□□□ -0.77
RBM39-239ENST00000494274 BTG4Q9NY30 223 aa10.25□□□□□ -0.77
RBM39-239ENST00000494274 UPF1Q92900 1129 aaKnown RBP eCLIP10.24□□□□□ -0.77
RBM39-239ENST00000494274 PRDM11Q9NQV5 511 aa10.24□□□□□ -0.77
RBM39-239ENST00000494274 PPIP5K1Q6PFW1 1433 aa10.24□□□□□ -0.77
RBM39-239ENST00000494274 ATP7BP35670 1465 aa10.23□□□□□ -0.77
RBM39-239ENST00000494274 BCL9LQ86UU0 1499 aa10.23□□□□□ -0.77
RBM39-239ENST00000494274 ADGRB2O60241 1585 aa10.23□□□□□ -0.77
RBM39-239ENST00000494274 CHRNA2Q15822 529 aa10.23□□□□□ -0.77
RBM39-239ENST00000494274 NLRP13Q86W25 1043 aa10.23□□□□□ -0.77
RBM39-239ENST00000494274 CCER1Q8TC90 406 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms