RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 EVC2Q86UK5 1308 aa18.28■□□□□ 0.52
VCP-207ENST00000493886 STAG3Q9UJ98 1225 aa18.27■□□□□ 0.52
VCP-207ENST00000493886 PUS7Q96PZ0 661 aaKnown RBP18.27■□□□□ 0.52
VCP-207ENST00000493886 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
VCP-207ENST00000493886 NSD3Q9BZ95 1437 aa18.26■□□□□ 0.51
VCP-207ENST00000493886 TULP4Q9NRJ4 1543 aa18.26■□□□□ 0.51
VCP-207ENST00000493886 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.26■□□□□ 0.51
VCP-207ENST00000493886 SPATA31D1Q6ZQQ2 1576 aa18.26■□□□□ 0.51
VCP-207ENST00000493886 STK26Q9P289 416 aa18.25■□□□□ 0.51
VCP-207ENST00000493886 CDCA7LQ96GN5 454 aa18.24■□□□□ 0.51
VCP-207ENST00000493886 SAFB2Q14151 953 aaKnown RBP eCLIP18.23■□□□□ 0.51
VCP-207ENST00000493886 RCAN3Q9UKA8 241 aa18.22■□□□□ 0.51
VCP-207ENST00000493886 A2ML1A8K2U0 1454 aa18.22■□□□□ 0.51
VCP-207ENST00000493886 ALKQ9UM73 1620 aa18.22■□□□□ 0.51
VCP-207ENST00000493886 YTHDC2Q9H6S0 1430 aaKnown RBP18.21■□□□□ 0.51
VCP-207ENST00000493886 PTPRMP28827 1452 aa18.21■□□□□ 0.51
VCP-207ENST00000493886 CABP2Q9NPB3 220 aa18.2■□□□□ 0.5
VCP-207ENST00000493886 USP32Q8NFA0 1604 aa18.2■□□□□ 0.5
VCP-207ENST00000493886 MORC1Q86VD1 984 aa18.19■□□□□ 0.5
VCP-207ENST00000493886 RRP1P56182 461 aaKnown RBP18.19■□□□□ 0.5
VCP-207ENST00000493886 ANKRD36BQ8N2N9 1353 aa18.19■□□□□ 0.5
VCP-207ENST00000493886 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
VCP-207ENST00000493886 PRAM1Q96QH2 718 aa18.18■□□□□ 0.5
VCP-207ENST00000493886 CGNL1Q0VF96 1302 aa18.18■□□□□ 0.5
VCP-207ENST00000493886 PLEKHH1Q9ULM0 1364 aa18.18■□□□□ 0.5
VCP-207ENST00000493886 RIMS2Q9UQ26 1411 aa18.17■□□□□ 0.5
VCP-207ENST00000493886 POLR3AO14802 1390 aaPredicted RBP18.17■□□□□ 0.5
VCP-207ENST00000493886 POGKQ9P215 609 aa18.17■□□□□ 0.5
VCP-207ENST00000493886 ZMYM3Q14202 1370 aa18.17■□□□□ 0.5
VCP-207ENST00000493886 SRPK2P78362 688 aaKnown RBP18.16■□□□□ 0.5
VCP-207ENST00000493886 MINK1Q8N4C8 1332 aaPredicted RBP18.15■□□□□ 0.5
VCP-207ENST00000493886 CCDC146Q8IYE0 955 aa18.15■□□□□ 0.5
VCP-207ENST00000493886 NINLQ9Y2I6 1382 aa18.15■□□□□ 0.5
VCP-207ENST00000493886 ZNF521Q96K83 1311 aa18.15■□□□□ 0.5
VCP-207ENST00000493886 TNNT2P45379 298 aaPredicted RBP18.14■□□□□ 0.49
VCP-207ENST00000493886 ATAD2Q6PL18 1390 aa18.13■□□□□ 0.49
VCP-207ENST00000493886 AEBP2Q6ZN18 517 aaPredicted RBP18.13■□□□□ 0.49
VCP-207ENST00000493886 NSD2O96028 1365 aa18.13■□□□□ 0.49
VCP-207ENST00000493886 A0A1W2PP64 1363 aa18.11■□□□□ 0.49
VCP-207ENST00000493886 APAF1O14727 1248 aa18.11■□□□□ 0.49
VCP-207ENST00000493886 GOLGA2Q08379 1002 aa18.11■□□□□ 0.49
VCP-207ENST00000493886 SETD1AO15047 1707 aaKnown RBP18.11■□□□□ 0.49
VCP-207ENST00000493886 DLC1Q96QB1 1528 aa18.1■□□□□ 0.49
VCP-207ENST00000493886 DUSP27Q5VZP5 1158 aa18.09■□□□□ 0.49
VCP-207ENST00000493886 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.09■□□□□ 0.49
VCP-207ENST00000493886 SHPRHQ149N8 1683 aa18.09■□□□□ 0.49
VCP-207ENST00000493886 PAK3O75914 559 aaPredicted RBP18.09■□□□□ 0.49
VCP-207ENST00000493886 TNRQ92752 1358 aa18.08■□□□□ 0.49
VCP-207ENST00000493886 ABCC11Q96J66 1382 aa18.08■□□□□ 0.49
VCP-207ENST00000493886 MTHFSP49914 203 aa18.08■□□□□ 0.49
VCP-207ENST00000493886 CDK19Q9BWU1 502 aa18.08■□□□□ 0.48
VCP-207ENST00000493886 NBR1Q14596 966 aa18.07■□□□□ 0.48
VCP-207ENST00000493886 EXOC6Q8TAG9 804 aa18.07■□□□□ 0.48
VCP-207ENST00000493886 TERF2IPQ9NYB0 399 aa18.07■□□□□ 0.48
VCP-207ENST00000493886 NRXN3Q9Y4C0 1643 aa18.07■□□□□ 0.48
VCP-207ENST00000493886 NGEFQ8N5V2 710 aa18.06■□□□□ 0.48
VCP-207ENST00000493886 SLFN5Q08AF3 891 aa18.06■□□□□ 0.48
VCP-207ENST00000493886 CD163L1Q9NR16 1453 aa18.06■□□□□ 0.48
VCP-207ENST00000493886 WAPLQ7Z5K2 1190 aa18.05■□□□□ 0.48
VCP-207ENST00000493886 CFAP53Q96M91 514 aa18.05■□□□□ 0.48
VCP-207ENST00000493886 HDGFP51858 240 aaKnown RBP18.04■□□□□ 0.48
VCP-207ENST00000493886 NOP58Q9Y2X3 529 aaKnown RBP18.04■□□□□ 0.48
VCP-207ENST00000493886 PLIN1O60240 522 aa18.04■□□□□ 0.48
VCP-207ENST00000493886 TRMT2AQ8IZ69 625 aaKnown RBP18.03■□□□□ 0.48
VCP-207ENST00000493886 METP08581 1390 aa18.03■□□□□ 0.48
VCP-207ENST00000493886 HDGFL2Q7Z4V5 671 aaPredicted RBP18.02■□□□□ 0.48
VCP-207ENST00000493886 GGNBP2Q9H3C7 697 aa18.02■□□□□ 0.48
VCP-207ENST00000493886 CABP1Q9NZU7 370 aa18.02■□□□□ 0.47
VCP-207ENST00000493886 NPM2Q86SE8 214 aaKnown RBP18.01■□□□□ 0.47
VCP-207ENST00000493886 RUNDC1Q96C34 613 aa18.01■□□□□ 0.47
VCP-207ENST00000493886 SPINK5Q9NQ38 1064 aaPredicted RBP18.01■□□□□ 0.47
VCP-207ENST00000493886 FYB1O15117 783 aa18.01■□□□□ 0.47
VCP-207ENST00000493886 UBR1Q8IWV7 1749 aa18.01■□□□□ 0.47
VCP-207ENST00000493886 TMEM2Q9UHN6 1383 aa18■□□□□ 0.47
VCP-207ENST00000493886 MED14O60244 1454 aa18■□□□□ 0.47
VCP-207ENST00000493886 E9PSI1 815 aa18■□□□□ 0.47
VCP-207ENST00000493886 DEKP35659 375 aaKnown RBP18■□□□□ 0.47
VCP-207ENST00000493886 NLRP1Q9C000 1473 aa18■□□□□ 0.47
VCP-207ENST00000493886 ANKRD26Q9UPS8 1709 aa17.99■□□□□ 0.47
VCP-207ENST00000493886 ANP32AP39687 249 aaKnown RBP17.99■□□□□ 0.47
VCP-207ENST00000493886 WWC1Q8IX03 1113 aa17.98■□□□□ 0.47
VCP-207ENST00000493886 DMRT2Q9Y5R5 561 aa17.98■□□□□ 0.47
VCP-207ENST00000493886 NKTRP30414 1462 aaKnown RBP17.98■□□□□ 0.47
VCP-207ENST00000493886 IQSEC2Q5JU85 1478 aa17.97■□□□□ 0.47
VCP-207ENST00000493886 TXNDC2Q86VQ3 553 aa17.97■□□□□ 0.47
VCP-207ENST00000493886 SKAP1Q86WV1 359 aa17.97■□□□□ 0.47
VCP-207ENST00000493886 CRBNQ96SW2 442 aa17.97■□□□□ 0.47
VCP-207ENST00000493886 KNDC1Q76NI1 1749 aa17.97■□□□□ 0.47
VCP-207ENST00000493886 TCP11L2Q8N4U5 519 aa17.96■□□□□ 0.47
VCP-207ENST00000493886 ATP7BP35670 1465 aa17.96■□□□□ 0.47
VCP-207ENST00000493886 TECPR2O15040 1411 aa17.96■□□□□ 0.47
VCP-207ENST00000493886 FAM135BQ49AJ0 1406 aa17.96■□□□□ 0.47
VCP-207ENST00000493886 WASLO00401 505 aaPredicted RBP17.95■□□□□ 0.46
VCP-207ENST00000493886 SIRT1Q96EB6 747 aa17.95■□□□□ 0.46
VCP-207ENST00000493886 KIF20BQ96Q89 1820 aa17.95■□□□□ 0.46
VCP-207ENST00000493886 U2AF1L5P0DN76 240 aaPredicted RBP17.95■□□□□ 0.46
VCP-207ENST00000493886 CEBPAP49715 358 aaPredicted RBP17.95■□□□□ 0.46
VCP-207ENST00000493886 U2AF1Q01081 240 aaKnown RBP eCLIP17.95■□□□□ 0.463e-6■■□□□ 12.5
VCP-207ENST00000493886 NEUROD2Q15784 382 aa17.95■□□□□ 0.46
VCP-207ENST00000493886 RRP7AQ9Y3A4 280 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms