RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 ADAMTS8Q9UP79 889 aa14.37□□□□□ -0.11
PHACTR4-204ENST00000493669 CGNL1Q0VF96 1302 aa14.37□□□□□ -0.11
PHACTR4-204ENST00000493669 TNRQ92752 1358 aa14.36□□□□□ -0.11
PHACTR4-204ENST00000493669 HDGFP51858 240 aaKnown RBP14.36□□□□□ -0.11
PHACTR4-204ENST00000493669 IRX6P78412 446 aaPredicted RBP14.35□□□□□ -0.11
PHACTR4-204ENST00000493669 NGEFQ8N5V2 710 aa14.34□□□□□ -0.11
PHACTR4-204ENST00000493669 STK26Q9P289 416 aa14.34□□□□□ -0.11
PHACTR4-204ENST00000493669 ABCC11Q96J66 1382 aa14.34□□□□□ -0.11
PHACTR4-204ENST00000493669 NRXN3Q9Y4C0 1643 aa14.34□□□□□ -0.11
PHACTR4-204ENST00000493669 PRAM1Q96QH2 718 aa14.34□□□□□ -0.11
PHACTR4-204ENST00000493669 POGKQ9P215 609 aa14.34□□□□□ -0.11
PHACTR4-204ENST00000493669 MORC1Q86VD1 984 aa14.33□□□□□ -0.12
PHACTR4-204ENST00000493669 KNDC1Q76NI1 1749 aa14.32□□□□□ -0.12
PHACTR4-204ENST00000493669 NLRP1Q9C000 1473 aa14.32□□□□□ -0.12
PHACTR4-204ENST00000493669 UBR1Q8IWV7 1749 aa14.32□□□□□ -0.12
PHACTR4-204ENST00000493669 CABP2Q9NPB3 220 aa14.32□□□□□ -0.12
PHACTR4-204ENST00000493669 MED14O60244 1454 aa14.31□□□□□ -0.12
PHACTR4-204ENST00000493669 SRPK2P78362 688 aaKnown RBP14.31□□□□□ -0.12
PHACTR4-204ENST00000493669 RCAN3Q9UKA8 241 aa14.3□□□□□ -0.12
PHACTR4-204ENST00000493669 TECPR2O15040 1411 aa14.3□□□□□ -0.12
PHACTR4-204ENST00000493669 SIRT1Q96EB6 747 aa14.3□□□□□ -0.12
PHACTR4-204ENST00000493669 TSHZ2Q9NRE2 1034 aa14.3□□□□□ -0.12
PHACTR4-204ENST00000493669 TERF2IPQ9NYB0 399 aa14.3□□□□□ -0.12
PHACTR4-204ENST00000493669 ZNF521Q96K83 1311 aa14.3□□□□□ -0.12
PHACTR4-204ENST00000493669 A0A1W2PP64 1363 aa14.29□□□□□ -0.12
PHACTR4-204ENST00000493669 TMEM2Q9UHN6 1383 aa14.29□□□□□ -0.12
PHACTR4-204ENST00000493669 SAFB2Q14151 953 aaKnown RBP eCLIP14.29□□□□□ -0.12
PHACTR4-204ENST00000493669 MINK1Q8N4C8 1332 aaPredicted RBP14.29□□□□□ -0.12
PHACTR4-204ENST00000493669 ANKRD26Q9UPS8 1709 aa14.29□□□□□ -0.12
PHACTR4-204ENST00000493669 FAM135BQ49AJ0 1406 aa14.29□□□□□ -0.12
PHACTR4-204ENST00000493669 SHPRHQ149N8 1683 aa14.28□□□□□ -0.12
PHACTR4-204ENST00000493669 SENP3-EIF4A1A0A087X0R7 540 aa14.28□□□□□ -0.12
PHACTR4-204ENST00000493669 RRP1P56182 461 aaKnown RBP14.28□□□□□ -0.12
PHACTR4-204ENST00000493669 SALL2Q9Y467 1007 aaPredicted RBP14.28□□□□□ -0.12
PHACTR4-204ENST00000493669 PLEKHH1Q9ULM0 1364 aa14.28□□□□□ -0.12
PHACTR4-204ENST00000493669 CD163L1Q9NR16 1453 aa14.28□□□□□ -0.12
PHACTR4-204ENST00000493669 CPS1P31327 1500 aa14.28□□□□□ -0.12
PHACTR4-204ENST00000493669 ATP7BP35670 1465 aa14.27□□□□□ -0.13
PHACTR4-204ENST00000493669 CFAP53Q96M91 514 aa14.27□□□□□ -0.13
PHACTR4-204ENST00000493669 CDCA7LQ96GN5 454 aa14.26□□□□□ -0.13
PHACTR4-204ENST00000493669 CDK19Q9BWU1 502 aa14.26□□□□□ -0.13
PHACTR4-204ENST00000493669 HDGFL2Q7Z4V5 671 aaPredicted RBP14.26□□□□□ -0.13
PHACTR4-204ENST00000493669 GOLGA2Q08379 1002 aa14.25□□□□□ -0.13
PHACTR4-204ENST00000493669 METP08581 1390 aa14.24□□□□□ -0.13
PHACTR4-204ENST00000493669 PLEKHG1Q9ULL1 1385 aa14.24□□□□□ -0.13
PHACTR4-204ENST00000493669 C3P01024 1663 aa14.24□□□□□ -0.13
PHACTR4-204ENST00000493669 FER1L4A9Z1Z3 1794 aa14.23□□□□□ -0.13
PHACTR4-204ENST00000493669 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
PHACTR4-204ENST00000493669 SLIT1O75093 1534 aa14.22□□□□□ -0.13
PHACTR4-204ENST00000493669 KIF20BQ96Q89 1820 aa14.22□□□□□ -0.13
PHACTR4-204ENST00000493669 SENP3Q9H4L4 574 aaPredicted RBP14.22□□□□□ -0.13
PHACTR4-204ENST00000493669 MTHFSP49914 203 aa14.22□□□□□ -0.13
PHACTR4-204ENST00000493669 DUSP27Q5VZP5 1158 aa14.22□□□□□ -0.13
PHACTR4-204ENST00000493669 ADAMTS13Q76LX8 1427 aa14.22□□□□□ -0.13
PHACTR4-204ENST00000493669 ARHGAP23Q9P227 1491 aa14.21□□□□□ -0.13
PHACTR4-204ENST00000493669 APAF1O14727 1248 aa14.21□□□□□ -0.13
PHACTR4-204ENST00000493669 SLFN5Q08AF3 891 aa14.21□□□□□ -0.13
PHACTR4-204ENST00000493669 TRMT2AQ8IZ69 625 aaKnown RBP14.21□□□□□ -0.13
PHACTR4-204ENST00000493669 IQSEC2Q5JU85 1478 aa14.21□□□□□ -0.14
PHACTR4-204ENST00000493669 B4GALNT3Q6L9W6 998 aa14.21□□□□□ -0.14
PHACTR4-204ENST00000493669 WAPLQ7Z5K2 1190 aa14.21□□□□□ -0.14
PHACTR4-204ENST00000493669 CCDC146Q8IYE0 955 aa14.21□□□□□ -0.14
PHACTR4-204ENST00000493669 ADGRB2O60241 1585 aa14.2□□□□□ -0.14
PHACTR4-204ENST00000493669 WASLO00401 505 aaPredicted RBP14.2□□□□□ -0.14
PHACTR4-204ENST00000493669 RUNDC1Q96C34 613 aa14.2□□□□□ -0.14
PHACTR4-204ENST00000493669 FYB1O15117 783 aa14.19□□□□□ -0.14
PHACTR4-204ENST00000493669 TNNT2P45379 298 aaPredicted RBP14.19□□□□□ -0.14
PHACTR4-204ENST00000493669 CABP1Q9NZU7 370 aa14.19□□□□□ -0.14
PHACTR4-204ENST00000493669 E9PSI1 815 aa14.19□□□□□ -0.14
PHACTR4-204ENST00000493669 CPSF1Q10570 1443 aaKnown RBP14.18□□□□□ -0.14
PHACTR4-204ENST00000493669 CCDC136Q96JN2 1154 aa14.18□□□□□ -0.14
PHACTR4-204ENST00000493669 DIP2AQ14689 1571 aa14.18□□□□□ -0.14
PHACTR4-204ENST00000493669 EDC4Q6P2E9 1401 aaKnown RBP14.18□□□□□ -0.14
PHACTR4-204ENST00000493669 COL3A1P02461 1466 aaPredicted RBP14.18□□□□□ -0.14
PHACTR4-204ENST00000493669 NKTRP30414 1462 aaKnown RBP14.18□□□□□ -0.14
PHACTR4-204ENST00000493669 EID1Q9Y6B2 187 aa14.17□□□□□ -0.14
PHACTR4-204ENST00000493669 CDC42BPGQ6DT37 1551 aa14.17□□□□□ -0.14
PHACTR4-204ENST00000493669 GGNBP2Q9H3C7 697 aa14.16□□□□□ -0.14
PHACTR4-204ENST00000493669 PPIP5K1Q6PFW1 1433 aa14.16□□□□□ -0.14
PHACTR4-204ENST00000493669 CCDC27Q2M243 656 aa14.16□□□□□ -0.14
PHACTR4-204ENST00000493669 TXNDC2Q86VQ3 553 aa14.16□□□□□ -0.14
PHACTR4-204ENST00000493669 PHF23Q9BUL5 403 aaPredicted RBP14.16□□□□□ -0.14
PHACTR4-204ENST00000493669 PNPLA6Q8IY17 1366 aa14.15□□□□□ -0.14
PHACTR4-204ENST00000493669 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.15□□□□□ -0.14
PHACTR4-204ENST00000493669 MON2Q7Z3U7 1717 aa14.15□□□□□ -0.14
PHACTR4-204ENST00000493669 TRHP20396 242 aaPredicted RBP14.14□□□□□ -0.15
PHACTR4-204ENST00000493669 LTKP29376 864 aa14.14□□□□□ -0.15
PHACTR4-204ENST00000493669 CEBPAP49715 358 aaPredicted RBP14.14□□□□□ -0.15
PHACTR4-204ENST00000493669 WWC1Q8IX03 1113 aa14.14□□□□□ -0.15
PHACTR4-204ENST00000493669 ROBO2Q9HCK4 1378 aa14.14□□□□□ -0.15
PHACTR4-204ENST00000493669 AKAP12Q02952 1782 aa14.14□□□□□ -0.15
PHACTR4-204ENST00000493669 THEMISQ8N1K5 641 aaPredicted RBP14.13□□□□□ -0.15
PHACTR4-204ENST00000493669 CCDC61Q9Y6R9 512 aa14.13□□□□□ -0.15
PHACTR4-204ENST00000493669 WDR63Q8IWG1 891 aa14.13□□□□□ -0.15
PHACTR4-204ENST00000493669 PTCH1Q13635 1447 aa14.13□□□□□ -0.15
PHACTR4-204ENST00000493669 NUDT16Q96DE0 195 aaKnown RBP14.13□□□□□ -0.15
PHACTR4-204ENST00000493669 TBX22Q9Y458 520 aa14.13□□□□□ -0.15
PHACTR4-204ENST00000493669 ITSN1Q15811 1721 aa14.13□□□□□ -0.15
PHACTR4-204ENST00000493669 TCP11L2Q8N4U5 519 aa14.12□□□□□ -0.15
PHACTR4-204ENST00000493669 EXOC6Q8TAG9 804 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms