RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 C8orf37Q96NL8 207 aa15.33■□□□□ 0.04
NUDCD3-210ENST00000493613 MPHOSPH9Q99550 1183 aa15.33■□□□□ 0.04
NUDCD3-210ENST00000493613 ADGRF5Q8IZF2 1346 aa15.33■□□□□ 0.04
NUDCD3-210ENST00000493613 ANKRD30BQ9BXX2 1392 aa15.33■□□□□ 0.04
NUDCD3-210ENST00000493613 SOS2Q07890 1332 aaPredicted RBP15.32■□□□□ 0.04
NUDCD3-210ENST00000493613 TECPR2O15040 1411 aa15.32■□□□□ 0.04
NUDCD3-210ENST00000493613 KIF1AQ12756 1690 aa15.32■□□□□ 0.04
NUDCD3-210ENST00000493613 PIK3C2GO75747 1445 aa15.31■□□□□ 0.04
NUDCD3-210ENST00000493613 PXDNQ92626 1479 aa15.3■□□□□ 0.04
NUDCD3-210ENST00000493613 ADAMTS2O95450 1211 aa15.29■□□□□ 0.04
NUDCD3-210ENST00000493613 UPF1Q92900 1129 aaKnown RBP eCLIP15.29■□□□□ 0.04
NUDCD3-210ENST00000493613 STK26Q9P289 416 aa15.29■□□□□ 0.04
NUDCD3-210ENST00000493613 RGS12O14924 1447 aa15.28■□□□□ 0.04
NUDCD3-210ENST00000493613 LRPPRCP42704 1394 aaKnown RBP15.28■□□□□ 0.04
NUDCD3-210ENST00000493613 ESCO1Q5FWF5 840 aa15.28■□□□□ 0.04
NUDCD3-210ENST00000493613 NGLY1Q96IV0 654 aa15.28■□□□□ 0.04
NUDCD3-210ENST00000493613 QTRT2Q9H974 415 aaKnown RBP15.28■□□□□ 0.04
NUDCD3-210ENST00000493613 NPHP3Q7Z494 1330 aa15.27■□□□□ 0.04
NUDCD3-210ENST00000493613 WAPLQ7Z5K2 1190 aa15.27■□□□□ 0.04
NUDCD3-210ENST00000493613 YTHDC2Q9H6S0 1430 aaKnown RBP15.26■□□□□ 0.03
NUDCD3-210ENST00000493613 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.26■□□□□ 0.03
NUDCD3-210ENST00000493613 ABCC11Q96J66 1382 aa15.26■□□□□ 0.03
NUDCD3-210ENST00000493613 ACIN1Q9UKV3 1341 aaKnown RBP15.26■□□□□ 0.03
NUDCD3-210ENST00000493613 RBM6P78332 1123 aaKnown RBP15.26■□□□□ 0.03
NUDCD3-210ENST00000493613 TMEM132EQ6IEE7 984 aa15.26■□□□□ 0.03
NUDCD3-210ENST00000493613 PLEKHH1Q9ULM0 1364 aa15.25■□□□□ 0.03
NUDCD3-210ENST00000493613 MYOM2P54296 1465 aa15.25■□□□□ 0.03
NUDCD3-210ENST00000493613 NRXN1Q9ULB1 1477 aa15.25■□□□□ 0.03
NUDCD3-210ENST00000493613 NUTM2FA1L443 756 aa15.24■□□□□ 0.03
NUDCD3-210ENST00000493613 EP400Q96L91 3159 aa15.24■□□□□ 0.03
NUDCD3-210ENST00000493613 ABCA3Q99758 1704 aa15.23■□□□□ 0.03
NUDCD3-210ENST00000493613 FOXO3O43524 673 aa15.23■□□□□ 0.03
NUDCD3-210ENST00000493613 USP21Q9UK80 565 aa15.23■□□□□ 0.03
NUDCD3-210ENST00000493613 XPCQ01831 940 aaPredicted RBP15.22■□□□□ 0.03
NUDCD3-210ENST00000493613 RAB3GAP2Q9H2M9 1393 aa15.21■□□□□ 0.02
NUDCD3-210ENST00000493613 USP32Q8NFA0 1604 aa15.21■□□□□ 0.02
NUDCD3-210ENST00000493613 PLCH1Q4KWH8 1693 aa15.2■□□□□ 0.02
NUDCD3-210ENST00000493613 FNBP4Q8N3X1 1017 aaPredicted RBP15.2■□□□□ 0.02
NUDCD3-210ENST00000493613 TRPC5Q9UL62 973 aaPredicted RBP15.2■□□□□ 0.02
NUDCD3-210ENST00000493613 ATRNO75882 1429 aa15.19■□□□□ 0.02
NUDCD3-210ENST00000493613 C14orf93Q9H972 538 aaKnown RBP15.19■□□□□ 0.02
NUDCD3-210ENST00000493613 DHX57Q6P158 1386 aaKnown RBP15.19■□□□□ 0.02
NUDCD3-210ENST00000493613 BRWD3Q6RI45 1802 aa15.19■□□□□ 0.02
NUDCD3-210ENST00000493613 ADGRB2O60241 1585 aa15.19■□□□□ 0.02
NUDCD3-210ENST00000493613 DLC1Q96QB1 1528 aa15.18■□□□□ 0.02
NUDCD3-210ENST00000493613 CFAP70Q5T0N1 1121 aa15.18■□□□□ 0.02
NUDCD3-210ENST00000493613 NWD2Q9ULI1 1742 aa15.17■□□□□ 0.02
NUDCD3-210ENST00000493613 BCL9LQ86UU0 1499 aa15.17■□□□□ 0.02
NUDCD3-210ENST00000493613 SIRT1Q96EB6 747 aa15.17■□□□□ 0.02
NUDCD3-210ENST00000493613 ADGRB1O14514 1584 aa15.16■□□□□ 0.02
NUDCD3-210ENST00000493613 ATAD2Q6PL18 1390 aa15.16■□□□□ 0.02
NUDCD3-210ENST00000493613 SPATA31A3Q5VYP0 1347 aa15.16■□□□□ 0.02
NUDCD3-210ENST00000493613 ITSN1Q15811 1721 aa15.15■□□□□ 0.02
NUDCD3-210ENST00000493613 ARHGEF28Q8N1W1 1705 aaKnown RBP15.15■□□□□ 0.02
NUDCD3-210ENST00000493613 TRPM3Q9HCF6 1732 aaPredicted RBP15.15■□□□□ 0.02
NUDCD3-210ENST00000493613 GLI3P10071 1580 aa15.15■□□□□ 0.02
NUDCD3-210ENST00000493613 SAFB2Q14151 953 aaKnown RBP eCLIP15.14■□□□□ 0.01
NUDCD3-210ENST00000493613 KRT28Q7Z3Y7 464 aa15.14■□□□□ 0.01
NUDCD3-210ENST00000493613 PRAM1Q96QH2 718 aa15.14■□□□□ 0.01
NUDCD3-210ENST00000493613 TNS3Q68CZ2 1445 aa15.14■□□□□ 0.01
NUDCD3-210ENST00000493613 ALS2Q96Q42 1657 aa15.13■□□□□ 0.01
NUDCD3-210ENST00000493613 PHF8Q9UPP1 1060 aa15.13■□□□□ 0.01
NUDCD3-210ENST00000493613 SLIT2O94813 1529 aa15.12■□□□□ 0.01
NUDCD3-210ENST00000493613 POGKQ9P215 609 aa15.12■□□□□ 0.01
NUDCD3-210ENST00000493613 CRYBG1Q9Y4K1 1723 aa15.12■□□□□ 0.01
NUDCD3-210ENST00000493613 ANKARQ7Z5J8 1434 aa15.11■□□□□ 0.01
NUDCD3-210ENST00000493613 PSME1Q06323 249 aa15.11■□□□□ 0.01
NUDCD3-210ENST00000493613 NRAPQ86VF7 1730 aa15.1■□□□□ 0.01
NUDCD3-210ENST00000493613 HAP1P54257 671 aaPredicted RBP15.1■□□□□ 0.01
NUDCD3-210ENST00000493613 GJD4Q96KN9 370 aaPredicted RBP15.1■□□□□ 0.01
NUDCD3-210ENST00000493613 RALGAPBQ86X10 1494 aa15.09■□□□□ 0.01
NUDCD3-210ENST00000493613 TULP4Q9NRJ4 1543 aa15.09■□□□□ 0.01
NUDCD3-210ENST00000493613 SBNO1A3KN83 1393 aa15.09■□□□□ 0.01
NUDCD3-210ENST00000493613 UNC5CLQ8IV45 518 aa15.08■□□□□ 0
NUDCD3-210ENST00000493613 DCAF11Q8TEB1 546 aa15.08■□□□□ 0
NUDCD3-210ENST00000493613 TRAK1Q9UPV9 953 aa15.08■□□□□ 0
NUDCD3-210ENST00000493613 KDM2AQ9Y2K7 1162 aa15.08■□□□□ 0
NUDCD3-210ENST00000493613 KIAA1210Q9ULL0 1709 aa15.08■□□□□ 0
NUDCD3-210ENST00000493613 ARHGEF10O15013 1369 aa15.08■□□□□ 0
NUDCD3-210ENST00000493613 COL14A1Q05707 1796 aaKnown RBP15.07■□□□□ 0
NUDCD3-210ENST00000493613 PLEKHG5O94827 1062 aa15.07■□□□□ 0
NUDCD3-210ENST00000493613 LMOD2Q6P5Q4 547 aa15.07■□□□□ 0
NUDCD3-210ENST00000493613 PMFBP1Q8TBY8 1022 aa15.07■□□□□ 0
NUDCD3-210ENST00000493613 CABLES1Q8TDN4 633 aa15.07■□□□□ 0
NUDCD3-210ENST00000493613 HIRIP3Q9BW71 556 aaPredicted RBP15.06■□□□□ 0
NUDCD3-210ENST00000493613 EIF3AQ14152 1382 aaKnown RBP15.06■□□□□ 0
NUDCD3-210ENST00000493613 SRCAPQ6ZRS2 3230 aa15.06■□□□□ 0
NUDCD3-210ENST00000493613 MINK1Q8N4C8 1332 aaPredicted RBP15.05■□□□□ -0
NUDCD3-210ENST00000493613 TOPAZ1Q8N9V7 1692 aa15.05■□□□□ -0
NUDCD3-210ENST00000493613 PHRF1Q9P1Y6 1649 aaKnown RBP15.04■□□□□ -0
NUDCD3-210ENST00000493613 STAC3Q96MF2 364 aa15.04■□□□□ -0
NUDCD3-210ENST00000493613 HRCP23327 699 aa15.03■□□□□ -0
NUDCD3-210ENST00000493613 CCDC125Q86Z20 511 aa15.03■□□□□ -0
NUDCD3-210ENST00000493613 GPRASP1Q5JY77 1395 aa15.02■□□□□ -0
NUDCD3-210ENST00000493613 PRR36Q9H6K5 1346 aa15.02■□□□□ -0
NUDCD3-210ENST00000493613 WASLO00401 505 aaPredicted RBP15.01□□□□□ -0.01
NUDCD3-210ENST00000493613 VPS72Q15906 364 aa15.01□□□□□ -0.01
NUDCD3-210ENST00000493613 ATP7BP35670 1465 aa15.01□□□□□ -0.01
NUDCD3-210ENST00000493613 CCDC9Q9Y3X0 531 aaKnown RBP15□□□□□ -0.01
NUDCD3-210ENST00000493613 BLMP54132 1417 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms