RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 PIP4K2BP78356 416 aa11.08□□□□□ -0.64
CAB39-206ENST00000493540 TMEM94Q12767 1356 aa11.07□□□□□ -0.64
CAB39-206ENST00000493540 CD44P16070 742 aaKnown RBP11.07□□□□□ -0.64
CAB39-206ENST00000493540 ADAMTS13Q76LX8 1427 aa11.07□□□□□ -0.64
CAB39-206ENST00000493540 NCOA3Q9Y6Q9 1424 aa11.07□□□□□ -0.64
CAB39-206ENST00000493540 ROCK1Q13464 1354 aa11.06□□□□□ -0.64
CAB39-206ENST00000493540 IDI1Q13907 227 aa11.06□□□□□ -0.64
CAB39-206ENST00000493540 CCDC61Q9Y6R9 512 aa11.06□□□□□ -0.64
CAB39-206ENST00000493540 TRPM2O94759 1503 aa11.05□□□□□ -0.64
CAB39-206ENST00000493540 TXNDC2Q86VQ3 553 aa11.05□□□□□ -0.64
CAB39-206ENST00000493540 RRP7BPQ9NSQ0 103 aa11.05□□□□□ -0.64
CAB39-206ENST00000493540 RGS17Q9UGC6 210 aaPredicted RBP11.05□□□□□ -0.64
CAB39-206ENST00000493540 CLTCL1P53675 1640 aa11.05□□□□□ -0.64
CAB39-206ENST00000493540 PPLO60437 1756 aa11.04□□□□□ -0.64
CAB39-206ENST00000493540 PLSCR2Q9NRY7 297 aa11.04□□□□□ -0.64
CAB39-206ENST00000493540 RIMS2Q9UQ26 1411 aa11.03□□□□□ -0.64
CAB39-206ENST00000493540 KCNA6P17658 529 aa11.03□□□□□ -0.64
CAB39-206ENST00000493540 SLC52A1Q9NWF4 448 aa11.03□□□□□ -0.64
CAB39-206ENST00000493540 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
CAB39-206ENST00000493540 IFT172Q9UG01 1749 aa11.03□□□□□ -0.64
CAB39-206ENST00000493540 NEXMIFQ5QGS0 1516 aa11.03□□□□□ -0.64
CAB39-206ENST00000493540 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
CAB39-206ENST00000493540 DCCP43146 1447 aa11.02□□□□□ -0.64
CAB39-206ENST00000493540 PRAG1Q86YV5 1406 aa11.02□□□□□ -0.64
CAB39-206ENST00000493540 RNF25Q96BH1 459 aaPredicted RBP11.02□□□□□ -0.65
CAB39-206ENST00000493540 LRP6O75581 1613 aa11.02□□□□□ -0.65
CAB39-206ENST00000493540 RIOK3O14730 519 aaKnown RBP11.01□□□□□ -0.65
CAB39-206ENST00000493540 TAOK2Q9UL54 1235 aa11.01□□□□□ -0.65
CAB39-206ENST00000493540 EID1Q9Y6B2 187 aa11.01□□□□□ -0.65
CAB39-206ENST00000493540 MARF1Q9Y4F3 1742 aaKnown RBP11.01□□□□□ -0.65
CAB39-206ENST00000493540 POTEIP0CG38 1075 aa11□□□□□ -0.65
CAB39-206ENST00000493540 PTPRUQ92729 1446 aa10.99□□□□□ -0.65
CAB39-206ENST00000493540 EP400Q96L91 3159 aa10.98□□□□□ -0.65
CAB39-206ENST00000493540 ASXL1Q8IXJ9 1541 aa10.98□□□□□ -0.65
CAB39-206ENST00000493540 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
CAB39-206ENST00000493540 MSH6P52701 1360 aa10.97□□□□□ -0.65
CAB39-206ENST00000493540 KNDC1Q76NI1 1749 aa10.97□□□□□ -0.65
CAB39-206ENST00000493540 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
CAB39-206ENST00000493540 JCADQ9P266 1359 aa10.95□□□□□ -0.66
CAB39-206ENST00000493540 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
CAB39-206ENST00000493540 KIF12Q96FN5 646 aa10.95□□□□□ -0.66
CAB39-206ENST00000493540 SLC26A8Q96RN1 970 aa10.95□□□□□ -0.66
CAB39-206ENST00000493540 SGIP1Q9BQI5 828 aa10.95□□□□□ -0.66
CAB39-206ENST00000493540 CHIC2Q9UKJ5 165 aa10.95□□□□□ -0.66
CAB39-206ENST00000493540 TBX22Q9Y458 520 aa10.95□□□□□ -0.66
CAB39-206ENST00000493540 CDK12Q9NYV4 1490 aaPredicted RBP10.93□□□□□ -0.66
CAB39-206ENST00000493540 MST1RQ04912 1400 aa10.93□□□□□ -0.66
CAB39-206ENST00000493540 RRBP1Q9P2E9 1410 aaKnown RBP10.93□□□□□ -0.66
CAB39-206ENST00000493540 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.93□□□□□ -0.66
CAB39-206ENST00000493540 MAP3K13O43283 966 aa10.93□□□□□ -0.66
CAB39-206ENST00000493540 CHGAP10645 457 aaKnown RBP10.93□□□□□ -0.66
CAB39-206ENST00000493540 SETD5Q9C0A6 1442 aa10.92□□□□□ -0.66
CAB39-206ENST00000493540 POTEAQ6S8J7 498 aa10.92□□□□□ -0.66
CAB39-206ENST00000493540 ZNF579Q8NAF0 562 aaKnown RBP10.92□□□□□ -0.66
CAB39-206ENST00000493540 PHF12Q96QT6 1004 aa10.92□□□□□ -0.66
CAB39-206ENST00000493540 PCDHB13Q9Y5F0 798 aa10.92□□□□□ -0.66
CAB39-206ENST00000493540 PTCH1Q13635 1447 aa10.92□□□□□ -0.66
CAB39-206ENST00000493540 ADGRL3Q9HAR2 1447 aa10.92□□□□□ -0.66
CAB39-206ENST00000493540 CDC42BPGQ6DT37 1551 aa10.91□□□□□ -0.66
CAB39-206ENST00000493540 PROSER2Q86WR7 435 aaPredicted RBP10.9□□□□□ -0.66
CAB39-206ENST00000493540 SLAIN2Q9P270 581 aa10.9□□□□□ -0.66
CAB39-206ENST00000493540 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
CAB39-206ENST00000493540 SRCAPQ6ZRS2 3230 aa10.9□□□□□ -0.67
CAB39-206ENST00000493540 SPATA31A6Q5VVP1 1343 aa10.89□□□□□ -0.67
CAB39-206ENST00000493540 CLCN6P51797 869 aa10.89□□□□□ -0.67
CAB39-206ENST00000493540 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.89□□□□□ -0.67
CAB39-206ENST00000493540 BBXQ8WY36 941 aaPredicted RBP10.89□□□□□ -0.67
CAB39-206ENST00000493540 DCBLD2Q96PD2 775 aa10.89□□□□□ -0.67
CAB39-206ENST00000493540 NAIPQ13075 1403 aa10.89□□□□□ -0.67
CAB39-206ENST00000493540 ABCA3Q99758 1704 aa10.89□□□□□ -0.67
CAB39-206ENST00000493540 HS6ST3Q8IZP7 471 aa10.88□□□□□ -0.67
CAB39-206ENST00000493540 RBM33Q96EV2 1170 aaKnown RBP10.88□□□□□ -0.67
CAB39-206ENST00000493540 FMN2Q9NZ56 1722 aa10.87□□□□□ -0.67
CAB39-206ENST00000493540 IFNL1Q8IU54 200 aa10.87□□□□□ -0.67
CAB39-206ENST00000493540 RGPD8O14715 1765 aaPredicted RBP10.87□□□□□ -0.67
CAB39-206ENST00000493540 HFM1A2PYH4 1435 aa10.86□□□□□ -0.67
CAB39-206ENST00000493540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.86□□□□□ -0.67
CAB39-206ENST00000493540 STK25O00506 426 aa10.86□□□□□ -0.67
CAB39-206ENST00000493540 PDAP1Q13442 181 aaKnown RBP10.86□□□□□ -0.67
CAB39-206ENST00000493540 FAM50AQ14320 339 aaKnown RBP10.86□□□□□ -0.67
CAB39-206ENST00000493540 ZFP91Q96JP5 570 aaPredicted RBP10.86□□□□□ -0.67
CAB39-206ENST00000493540 NUP155O75694 1391 aa10.86□□□□□ -0.67
CAB39-206ENST00000493540 METP08581 1390 aa10.86□□□□□ -0.67
CAB39-206ENST00000493540 C19orf44Q9H6X5 657 aa10.85□□□□□ -0.67
CAB39-206ENST00000493540 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.85□□□□□ -0.67
CAB39-206ENST00000493540 HDGFP51858 240 aaKnown RBP10.84□□□□□ -0.67
CAB39-206ENST00000493540 BRINP3Q76B58 766 aa10.84□□□□□ -0.67
CAB39-206ENST00000493540 CADPS2Q86UW7 1296 aa10.84□□□□□ -0.67
CAB39-206ENST00000493540 KIF1AQ12756 1690 aa10.84□□□□□ -0.67
CAB39-206ENST00000493540 PNPLA6Q8IY17 1366 aa10.83□□□□□ -0.68
CAB39-206ENST00000493540 PSEN1P49768 467 aa10.83□□□□□ -0.68
CAB39-206ENST00000493540 TECPR2O15040 1411 aa10.83□□□□□ -0.68
CAB39-206ENST00000493540 C1orf167Q5SNV9 1468 aa10.82□□□□□ -0.68
CAB39-206ENST00000493540 BRWD3Q6RI45 1802 aa10.82□□□□□ -0.68
CAB39-206ENST00000493540 CRYBG1Q9Y4K1 1723 aa10.82□□□□□ -0.68
CAB39-206ENST00000493540 PPP1R15AO75807 674 aaPredicted RBP10.82□□□□□ -0.68
CAB39-206ENST00000493540 BCL11BQ9C0K0 894 aaPredicted RBP10.82□□□□□ -0.68
CAB39-206ENST00000493540 STK24Q9Y6E0 443 aa10.81□□□□□ -0.68
CAB39-206ENST00000493540 RGS12O14924 1447 aa10.81□□□□□ -0.68
CAB39-206ENST00000493540 NWD2Q9ULI1 1742 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms