RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 SAFB2Q14151 953 aaKnown RBP eCLIP16.2■□□□□ 0.18
LSM2-214ENST00000493387 C19orf44Q9H6X5 657 aa16.2■□□□□ 0.18
LSM2-214ENST00000493387 PLEKHH1Q9ULM0 1364 aa16.2■□□□□ 0.18
LSM2-214ENST00000493387 ADGRL3Q9HAR2 1447 aa16.18■□□□□ 0.18
LSM2-214ENST00000493387 MINK1Q8N4C8 1332 aaPredicted RBP16.18■□□□□ 0.18
LSM2-214ENST00000493387 MSH6P52701 1360 aa16.17■□□□□ 0.18
LSM2-214ENST00000493387 TESK2Q96S53 571 aa16.17■□□□□ 0.18
LSM2-214ENST00000493387 EVC2Q86UK5 1308 aa16.17■□□□□ 0.18
LSM2-214ENST00000493387 TMF1P82094 1093 aa16.16■□□□□ 0.18
LSM2-214ENST00000493387 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
LSM2-214ENST00000493387 RBM33Q96EV2 1170 aaKnown RBP16.16■□□□□ 0.18
LSM2-214ENST00000493387 ATF3P18847 181 aa16.15■□□□□ 0.18
LSM2-214ENST00000493387 CADPS2Q86UW7 1296 aa16.15■□□□□ 0.18
LSM2-214ENST00000493387 PUS7Q96PZ0 661 aaKnown RBP16.15■□□□□ 0.18
LSM2-214ENST00000493387 DCCP43146 1447 aa16.14■□□□□ 0.17
LSM2-214ENST00000493387 WASLO00401 505 aaPredicted RBP16.14■□□□□ 0.17
LSM2-214ENST00000493387 QRICH2Q9H0J4 1663 aa16.14■□□□□ 0.17
LSM2-214ENST00000493387 HIRIP3Q9BW71 556 aaPredicted RBP16.13■□□□□ 0.17
LSM2-214ENST00000493387 IQSEC2Q5JU85 1478 aa16.13■□□□□ 0.17
LSM2-214ENST00000493387 ADGRB2O60241 1585 aa16.13■□□□□ 0.17
LSM2-214ENST00000493387 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.12■□□□□ 0.17
LSM2-214ENST00000493387 CERKQ8TCT0 537 aa16.12■□□□□ 0.17
LSM2-214ENST00000493387 CDK19Q9BWU1 502 aa16.12■□□□□ 0.17
LSM2-214ENST00000493387 CDC42BPGQ6DT37 1551 aa16.1■□□□□ 0.17
LSM2-214ENST00000493387 SRPK2P78362 688 aaKnown RBP16.1■□□□□ 0.17
LSM2-214ENST00000493387 NALCNQ8IZF0 1738 aa16.08■□□□□ 0.17
LSM2-214ENST00000493387 XIRP1Q702N8 1843 aaKnown RBP16.08■□□□□ 0.17
LSM2-214ENST00000493387 ATAD2Q6PL18 1390 aa16.08■□□□□ 0.16
LSM2-214ENST00000493387 ANKARQ7Z5J8 1434 aa16.08■□□□□ 0.16
LSM2-214ENST00000493387 TOM1O60784 492 aa16.07■□□□□ 0.16
LSM2-214ENST00000493387 CABP2Q9NPB3 220 aa16.07■□□□□ 0.16
LSM2-214ENST00000493387 TULP4Q9NRJ4 1543 aa16.06■□□□□ 0.16
LSM2-214ENST00000493387 DISP3Q9P2K9 1392 aa16.06■□□□□ 0.16
LSM2-214ENST00000493387 NUDT16Q96DE0 195 aaKnown RBP16.06■□□□□ 0.16
LSM2-214ENST00000493387 CCDC61Q9Y6R9 512 aa16.06■□□□□ 0.16
LSM2-214ENST00000493387 SLAIN2Q9P270 581 aa16.05■□□□□ 0.16
LSM2-214ENST00000493387 MST1RQ04912 1400 aa16.03■□□□□ 0.16
LSM2-214ENST00000493387 NINLQ9Y2I6 1382 aa16.03■□□□□ 0.16
LSM2-214ENST00000493387 FMN2Q9NZ56 1722 aa16.03■□□□□ 0.16
LSM2-214ENST00000493387 NUTM2FA1L443 756 aa16.03■□□□□ 0.16
LSM2-214ENST00000493387 ZNF316A6NFI3 1004 aaPredicted RBP16.03■□□□□ 0.16
LSM2-214ENST00000493387 C1orf167Q5SNV9 1468 aa16.03■□□□□ 0.16
LSM2-214ENST00000493387 PRR36Q9H6K5 1346 aa16.02■□□□□ 0.16
LSM2-214ENST00000493387 C11orf95C9JLR9 678 aaPredicted RBP16.02■□□□□ 0.16
LSM2-214ENST00000493387 CCDC7Q96M83 1385 aa16.01■□□□□ 0.15
LSM2-214ENST00000493387 KIF7Q2M1P5 1343 aa16.01■□□□□ 0.15
LSM2-214ENST00000493387 PLEKHG3A1L390 1219 aa16.01■□□□□ 0.15
LSM2-214ENST00000493387 UBAP1LF5GYI3 381 aa16.01■□□□□ 0.15
LSM2-214ENST00000493387 ESCO1Q5FWF5 840 aa16.01■□□□□ 0.15
LSM2-214ENST00000493387 POLR3GLQ9BT43 218 aa16.01■□□□□ 0.15
LSM2-214ENST00000493387 ATP7BP35670 1465 aa16■□□□□ 0.15
LSM2-214ENST00000493387 TMC1Q8TDI8 760 aa16■□□□□ 0.15
LSM2-214ENST00000493387 PHF8Q9UPP1 1060 aa16■□□□□ 0.15
LSM2-214ENST00000493387 CABP1Q9NZU7 370 aa15.99■□□□□ 0.15
LSM2-214ENST00000493387 WASHC2AQ641Q2 1341 aa15.98■□□□□ 0.15
LSM2-214ENST00000493387 PPIP5K1Q6PFW1 1433 aa15.98■□□□□ 0.15
LSM2-214ENST00000493387 ZNF692Q9BU19 519 aaPredicted RBP15.98■□□□□ 0.15
LSM2-214ENST00000493387 TERF2IPQ9NYB0 399 aa15.98■□□□□ 0.15
LSM2-214ENST00000493387 NGDNQ8NEJ9 315 aaKnown RBP15.97■□□□□ 0.15
LSM2-214ENST00000493387 ORAI2Q96SN7 254 aa15.97■□□□□ 0.15
LSM2-214ENST00000493387 BRINP3Q76B58 766 aa15.96■□□□□ 0.15
LSM2-214ENST00000493387 HDGFL2Q7Z4V5 671 aaPredicted RBP15.96■□□□□ 0.15
LSM2-214ENST00000493387 SLC12A5Q9H2X9 1139 aa15.96■□□□□ 0.15
LSM2-214ENST00000493387 USP32Q8NFA0 1604 aa15.96■□□□□ 0.15
LSM2-214ENST00000493387 ITSN1Q15811 1721 aa15.96■□□□□ 0.15
LSM2-214ENST00000493387 PMFBP1Q8TBY8 1022 aa15.95■□□□□ 0.14
LSM2-214ENST00000493387 POLR3AO14802 1390 aaPredicted RBP15.94■□□□□ 0.14
LSM2-214ENST00000493387 ACEP12821 1306 aa15.94■□□□□ 0.14
LSM2-214ENST00000493387 NPHP3Q7Z494 1330 aa15.94■□□□□ 0.14
LSM2-214ENST00000493387 KIF1AQ12756 1690 aa15.93■□□□□ 0.14
LSM2-214ENST00000493387 TOPAZ1Q8N9V7 1692 aa15.93■□□□□ 0.14
LSM2-214ENST00000493387 BRD4O60885 1362 aaPredicted RBP15.93■□□□□ 0.14
LSM2-214ENST00000493387 ANKRD36BQ8N2N9 1353 aa15.93■□□□□ 0.14
LSM2-214ENST00000493387 PIP4K2BP78356 416 aa15.93■□□□□ 0.14
LSM2-214ENST00000493387 PSME1Q06323 249 aa15.93■□□□□ 0.14
LSM2-214ENST00000493387 MSH5O43196 834 aa15.92■□□□□ 0.14
LSM2-214ENST00000493387 FOXO3O43524 673 aa15.92■□□□□ 0.14
LSM2-214ENST00000493387 RGPD8O14715 1765 aaPredicted RBP15.92■□□□□ 0.14
LSM2-214ENST00000493387 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
LSM2-214ENST00000493387 CPSF1Q10570 1443 aaKnown RBP15.91■□□□□ 0.14
LSM2-214ENST00000493387 PANK3Q9H999 370 aa15.9■□□□□ 0.14
LSM2-214ENST00000493387 KTN1Q86UP2 1357 aaKnown RBP15.89■□□□□ 0.13
LSM2-214ENST00000493387 KRT28Q7Z3Y7 464 aa15.89■□□□□ 0.13
LSM2-214ENST00000493387 A0A1W2PP64 1363 aa15.87■□□□□ 0.13
LSM2-214ENST00000493387 USP6P35125 1406 aa15.87■□□□□ 0.13
LSM2-214ENST00000493387 ROBO1Q9Y6N7 1651 aa15.87■□□□□ 0.13
LSM2-214ENST00000493387 CD163L1Q9NR16 1453 aa15.87■□□□□ 0.13
LSM2-214ENST00000493387 SOS2Q07890 1332 aaPredicted RBP15.87■□□□□ 0.13
LSM2-214ENST00000493387 SBNO1A3KN83 1393 aa15.87■□□□□ 0.13
LSM2-214ENST00000493387 EDC4Q6P2E9 1401 aaKnown RBP15.86■□□□□ 0.13
LSM2-214ENST00000493387 MYOM1P52179 1685 aa15.86■□□□□ 0.13
LSM2-214ENST00000493387 DDX10Q13206 875 aaKnown RBP15.86■□□□□ 0.13
LSM2-214ENST00000493387 KNSTRNQ9Y448 316 aa15.86■□□□□ 0.13
LSM2-214ENST00000493387 TTC21AQ8NDW8 1320 aa15.86■□□□□ 0.13
LSM2-214ENST00000493387 FBXO41Q8TF61 875 aa15.85■□□□□ 0.13
LSM2-214ENST00000493387 AHDC1Q5TGY3 1603 aaPredicted RBP15.85■□□□□ 0.13
LSM2-214ENST00000493387 DDX17Q92841 729 aaKnown RBP15.84■□□□□ 0.13
LSM2-214ENST00000493387 LRRC59Q96AG4 307 aaKnown RBP15.84■□□□□ 0.13
LSM2-214ENST00000493387 CARD14Q9BXL6 1004 aa15.84■□□□□ 0.13
LSM2-214ENST00000493387 TTC21BQ7Z4L5 1316 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms