RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 C1orf167Q5SNV9 1468 aa13.13□□□□□ -0.31
TM4SF1-203ENST00000493298 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
TM4SF1-203ENST00000493298 PLEKHH1Q9ULM0 1364 aa13.13□□□□□ -0.31
TM4SF1-203ENST00000493298 TIMELESSQ9UNS1 1208 aa13.13□□□□□ -0.31
TM4SF1-203ENST00000493298 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
TM4SF1-203ENST00000493298 C14orf93Q9H972 538 aaKnown RBP13.12□□□□□ -0.31
TM4SF1-203ENST00000493298 ARHGEF28Q8N1W1 1705 aaKnown RBP13.12□□□□□ -0.31
TM4SF1-203ENST00000493298 USP32Q8NFA0 1604 aa13.12□□□□□ -0.31
TM4SF1-203ENST00000493298 DLC1Q96QB1 1528 aa13.11□□□□□ -0.31
TM4SF1-203ENST00000493298 ADGRB2O60241 1585 aa13.11□□□□□ -0.31
TM4SF1-203ENST00000493298 KIAA1210Q9ULL0 1709 aa13.1□□□□□ -0.31
TM4SF1-203ENST00000493298 TMEM132EQ6IEE7 984 aa13.1□□□□□ -0.31
TM4SF1-203ENST00000493298 ATF3P18847 181 aa13.09□□□□□ -0.31
TM4SF1-203ENST00000493298 COL22A1Q8NFW1 1626 aaPredicted RBP13.09□□□□□ -0.31
TM4SF1-203ENST00000493298 JCADQ9P266 1359 aa13.08□□□□□ -0.31
TM4SF1-203ENST00000493298 CFAP70Q5T0N1 1121 aa13.08□□□□□ -0.32
TM4SF1-203ENST00000493298 PXDNQ92626 1479 aa13.08□□□□□ -0.32
TM4SF1-203ENST00000493298 WAPLQ7Z5K2 1190 aa13.07□□□□□ -0.32
TM4SF1-203ENST00000493298 TONSLQ96HA7 1378 aa13.07□□□□□ -0.32
TM4SF1-203ENST00000493298 MARF1Q9Y4F3 1742 aaKnown RBP13.06□□□□□ -0.32
TM4SF1-203ENST00000493298 C14orf37Q86TY3 774 aa13.06□□□□□ -0.32
TM4SF1-203ENST00000493298 DDX17Q92841 729 aaKnown RBP13.06□□□□□ -0.32
TM4SF1-203ENST00000493298 SIRT1Q96EB6 747 aa13.05□□□□□ -0.32
TM4SF1-203ENST00000493298 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
TM4SF1-203ENST00000493298 KIF1AQ12756 1690 aa13.04□□□□□ -0.32
TM4SF1-203ENST00000493298 SOS2Q07890 1332 aaPredicted RBP13.04□□□□□ -0.32
TM4SF1-203ENST00000493298 ABCA3Q99758 1704 aa13.03□□□□□ -0.32
TM4SF1-203ENST00000493298 SOCS7O14512 581 aa13.03□□□□□ -0.32
TM4SF1-203ENST00000493298 DCAF11Q8TEB1 546 aa13.03□□□□□ -0.32
TM4SF1-203ENST00000493298 PNPLA6Q8IY17 1366 aa13.03□□□□□ -0.32
TM4SF1-203ENST00000493298 TRPM3Q9HCF6 1732 aaPredicted RBP13.02□□□□□ -0.32
TM4SF1-203ENST00000493298 STK26Q9P289 416 aa13.02□□□□□ -0.33
TM4SF1-203ENST00000493298 NBPF1Q3BBV0 1214 aa13.01□□□□□ -0.33
TM4SF1-203ENST00000493298 POTEAQ6S8J7 498 aa13.01□□□□□ -0.33
TM4SF1-203ENST00000493298 KDM2AQ9Y2K7 1162 aa13.01□□□□□ -0.33
TM4SF1-203ENST00000493298 SPATA31A6Q5VVP1 1343 aa13.01□□□□□ -0.33
TM4SF1-203ENST00000493298 TRPM1Q7Z4N2 1603 aa13.01□□□□□ -0.33
TM4SF1-203ENST00000493298 TOPAZ1Q8N9V7 1692 aa13.01□□□□□ -0.33
TM4SF1-203ENST00000493298 CRYBG1Q9Y4K1 1723 aa13.01□□□□□ -0.33
TM4SF1-203ENST00000493298 EP400Q96L91 3159 aa13.01□□□□□ -0.33
TM4SF1-203ENST00000493298 ALS2Q96Q42 1657 aa12.99□□□□□ -0.33
TM4SF1-203ENST00000493298 STAC3Q96MF2 364 aa12.98□□□□□ -0.33
TM4SF1-203ENST00000493298 RALGAPBQ86X10 1494 aa12.97□□□□□ -0.33
TM4SF1-203ENST00000493298 PRAM1Q96QH2 718 aa12.97□□□□□ -0.33
TM4SF1-203ENST00000493298 GPRASP1Q5JY77 1395 aa12.96□□□□□ -0.33
TM4SF1-203ENST00000493298 ITSN1Q15811 1721 aa12.96□□□□□ -0.34
TM4SF1-203ENST00000493298 PRR36Q9H6K5 1346 aa12.95□□□□□ -0.34
TM4SF1-203ENST00000493298 TULP4Q9NRJ4 1543 aa12.95□□□□□ -0.34
TM4SF1-203ENST00000493298 ATP7BP35670 1465 aa12.95□□□□□ -0.34
TM4SF1-203ENST00000493298 ANKARQ7Z5J8 1434 aa12.95□□□□□ -0.34
TM4SF1-203ENST00000493298 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.94□□□□□ -0.34
TM4SF1-203ENST00000493298 QRICH2Q9H0J4 1663 aa12.94□□□□□ -0.34
TM4SF1-203ENST00000493298 LRRC59Q96AG4 307 aaKnown RBP12.94□□□□□ -0.34
TM4SF1-203ENST00000493298 NUTM2FA1L443 756 aa12.92□□□□□ -0.34
TM4SF1-203ENST00000493298 C11orf95C9JLR9 678 aaPredicted RBP12.92□□□□□ -0.34
TM4SF1-203ENST00000493298 FOXO3O43524 673 aa12.92□□□□□ -0.34
TM4SF1-203ENST00000493298 ESCO1Q5FWF5 840 aa12.92□□□□□ -0.34
TM4SF1-203ENST00000493298 PHF23Q9BUL5 403 aaPredicted RBP12.92□□□□□ -0.34
TM4SF1-203ENST00000493298 HIRIP3Q9BW71 556 aaPredicted RBP12.92□□□□□ -0.34
TM4SF1-203ENST00000493298 TRAK1Q9UPV9 953 aa12.92□□□□□ -0.34
TM4SF1-203ENST00000493298 NPHP3Q7Z494 1330 aa12.91□□□□□ -0.34
TM4SF1-203ENST00000493298 SAFB2Q14151 953 aaKnown RBP eCLIP12.91□□□□□ -0.34
TM4SF1-203ENST00000493298 XPCQ01831 940 aaPredicted RBP12.9□□□□□ -0.34
TM4SF1-203ENST00000493298 PLCH1Q4KWH8 1693 aa12.89□□□□□ -0.35
TM4SF1-203ENST00000493298 SPATA31A3Q5VYP0 1347 aa12.89□□□□□ -0.35
TM4SF1-203ENST00000493298 HSPA5P11021 654 aaKnown RBP12.89□□□□□ -0.35
TM4SF1-203ENST00000493298 NRAPQ86VF7 1730 aa12.88□□□□□ -0.35
TM4SF1-203ENST00000493298 BCL9LQ86UU0 1499 aa12.88□□□□□ -0.35
TM4SF1-203ENST00000493298 CDK12Q9NYV4 1490 aaPredicted RBP12.88□□□□□ -0.35
TM4SF1-203ENST00000493298 NWD2Q9ULI1 1742 aa12.88□□□□□ -0.35
TM4SF1-203ENST00000493298 TNS3Q68CZ2 1445 aa12.88□□□□□ -0.35
TM4SF1-203ENST00000493298 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
TM4SF1-203ENST00000493298 NUTM2BA6NNL0 878 aaPredicted RBP12.87□□□□□ -0.35
TM4SF1-203ENST00000493298 NUTM2EB1AL46 878 aaPredicted RBP12.87□□□□□ -0.35
TM4SF1-203ENST00000493298 WASLO00401 505 aaPredicted RBP12.87□□□□□ -0.35
TM4SF1-203ENST00000493298 NUTM2AQ8IVF1 878 aaPredicted RBP12.87□□□□□ -0.35
TM4SF1-203ENST00000493298 SLIT2O94813 1529 aa12.87□□□□□ -0.35
TM4SF1-203ENST00000493298 AFF2P51816 1311 aa12.87□□□□□ -0.35
TM4SF1-203ENST00000493298 SBNO1A3KN83 1393 aa12.86□□□□□ -0.35
TM4SF1-203ENST00000493298 TESK2Q96S53 571 aa12.86□□□□□ -0.35
TM4SF1-203ENST00000493298 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
TM4SF1-203ENST00000493298 PHRF1Q9P1Y6 1649 aaKnown RBP12.86□□□□□ -0.35
TM4SF1-203ENST00000493298 BRWD3Q6RI45 1802 aa12.85□□□□□ -0.35
TM4SF1-203ENST00000493298 AKAP12Q02952 1782 aa12.85□□□□□ -0.35
TM4SF1-203ENST00000493298 ZNF316A6NFI3 1004 aaPredicted RBP12.85□□□□□ -0.35
TM4SF1-203ENST00000493298 FNBP4Q8N3X1 1017 aaPredicted RBP12.85□□□□□ -0.35
TM4SF1-203ENST00000493298 POGKQ9P215 609 aa12.85□□□□□ -0.35
TM4SF1-203ENST00000493298 ATRNO75882 1429 aa12.85□□□□□ -0.35
TM4SF1-203ENST00000493298 GLI3P10071 1580 aa12.85□□□□□ -0.35
TM4SF1-203ENST00000493298 POLR3AO14802 1390 aaPredicted RBP12.84□□□□□ -0.35
TM4SF1-203ENST00000493298 ROCK2O75116 1388 aaKnown RBP12.84□□□□□ -0.35
TM4SF1-203ENST00000493298 USP47Q96K76 1375 aa12.84□□□□□ -0.35
TM4SF1-203ENST00000493298 RGS12O14924 1447 aa12.84□□□□□ -0.35
TM4SF1-203ENST00000493298 KRT28Q7Z3Y7 464 aa12.83□□□□□ -0.36
TM4SF1-203ENST00000493298 CARD11Q9BXL7 1154 aa12.83□□□□□ -0.36
TM4SF1-203ENST00000493298 NRKQ7Z2Y5 1582 aa12.82□□□□□ -0.36
TM4SF1-203ENST00000493298 ST20-MTHFSA0A0A6YYL1 179 aa12.82□□□□□ -0.36
TM4SF1-203ENST00000493298 ZNF772Q68DY9 489 aaPredicted RBP12.82□□□□□ -0.36
TM4SF1-203ENST00000493298 PMFBP1Q8TBY8 1022 aa12.82□□□□□ -0.36
TM4SF1-203ENST00000493298 ADAMTS2O95450 1211 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms