RNA–Protein interactions for RNA: ENST00000492932.5

PDCD4-210, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-210ENST00000492932 CDC42BPGQ6DT37 1551 aa17.12■□□□□ 0.33
PDCD4-210ENST00000492932 NPHP3Q7Z494 1330 aa17.12■□□□□ 0.33
PDCD4-210ENST00000492932 PIK3C2GO75747 1445 aa17.12■□□□□ 0.33
PDCD4-210ENST00000492932 TMEM132EQ6IEE7 984 aa17.11■□□□□ 0.33
PDCD4-210ENST00000492932 SOS2Q07890 1332 aaPredicted RBP17.11■□□□□ 0.33
PDCD4-210ENST00000492932 TECPR2O15040 1411 aa17.11■□□□□ 0.33
PDCD4-210ENST00000492932 ADAMTS2O95450 1211 aa17.1■□□□□ 0.33
PDCD4-210ENST00000492932 WAPLQ7Z5K2 1190 aa17.1■□□□□ 0.33
PDCD4-210ENST00000492932 NGLY1Q96IV0 654 aa17.1■□□□□ 0.33
PDCD4-210ENST00000492932 ABCC11Q96J66 1382 aa17.1■□□□□ 0.33
PDCD4-210ENST00000492932 RAB3GAP2Q9H2M9 1393 aa17.1■□□□□ 0.33
PDCD4-210ENST00000492932 LAMC1P11047 1609 aa17.1■□□□□ 0.33
PDCD4-210ENST00000492932 YTHDC2Q9H6S0 1430 aaKnown RBP17.08■□□□□ 0.32
PDCD4-210ENST00000492932 DHX57Q6P158 1386 aaKnown RBP17.08■□□□□ 0.32
PDCD4-210ENST00000492932 NUTM2FA1L443 756 aa17.08■□□□□ 0.32
PDCD4-210ENST00000492932 QTRT2Q9H974 415 aaKnown RBP17.08■□□□□ 0.32
PDCD4-210ENST00000492932 KNDC1Q76NI1 1749 aa17.07■□□□□ 0.32
PDCD4-210ENST00000492932 C14orf93Q9H972 538 aaKnown RBP17.07■□□□□ 0.32
PDCD4-210ENST00000492932 CDK12Q9NYV4 1490 aaPredicted RBP17.06■□□□□ 0.32
PDCD4-210ENST00000492932 FOXO3O43524 673 aa17.06■□□□□ 0.32
PDCD4-210ENST00000492932 RBM6P78332 1123 aaKnown RBP17.06■□□□□ 0.32
PDCD4-210ENST00000492932 MYOM2P54296 1465 aa17.05■□□□□ 0.32
PDCD4-210ENST00000492932 SIRT1Q96EB6 747 aa17.05■□□□□ 0.32
PDCD4-210ENST00000492932 CFAP70Q5T0N1 1121 aa17.04■□□□□ 0.32
PDCD4-210ENST00000492932 PLEKHH1Q9ULM0 1364 aa17.03■□□□□ 0.32
PDCD4-210ENST00000492932 USP21Q9UK80 565 aa17.03■□□□□ 0.32
PDCD4-210ENST00000492932 NRXN1Q9ULB1 1477 aa17.02■□□□□ 0.32
PDCD4-210ENST00000492932 XPCQ01831 940 aaPredicted RBP17.02■□□□□ 0.32
PDCD4-210ENST00000492932 POGKQ9P215 609 aa17.02■□□□□ 0.32
PDCD4-210ENST00000492932 COL22A1Q8NFW1 1626 aaPredicted RBP17.01■□□□□ 0.31
PDCD4-210ENST00000492932 UPF1Q92900 1129 aaKnown RBP eCLIP17.01■□□□□ 0.31
PDCD4-210ENST00000492932 TRPC5Q9UL62 973 aaPredicted RBP17.01■□□□□ 0.31
PDCD4-210ENST00000492932 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
PDCD4-210ENST00000492932 PXDNQ92626 1479 aa17■□□□□ 0.31
PDCD4-210ENST00000492932 PSME1Q06323 249 aa17■□□□□ 0.31
PDCD4-210ENST00000492932 PRAM1Q96QH2 718 aa17■□□□□ 0.31
PDCD4-210ENST00000492932 FMN2Q9NZ56 1722 aa17■□□□□ 0.31
PDCD4-210ENST00000492932 HRCP23327 699 aa16.99■□□□□ 0.31
PDCD4-210ENST00000492932 HAP1P54257 671 aaPredicted RBP16.99■□□□□ 0.31
PDCD4-210ENST00000492932 SAFB2Q14151 953 aaKnown RBP eCLIP16.99■□□□□ 0.31
PDCD4-210ENST00000492932 DCAF11Q8TEB1 546 aa16.99■□□□□ 0.31
PDCD4-210ENST00000492932 STAC3Q96MF2 364 aa16.99■□□□□ 0.31
PDCD4-210ENST00000492932 KDM2AQ9Y2K7 1162 aa16.99■□□□□ 0.31
PDCD4-210ENST00000492932 KRT28Q7Z3Y7 464 aa16.97■□□□□ 0.31
PDCD4-210ENST00000492932 FNBP4Q8N3X1 1017 aaPredicted RBP16.97■□□□□ 0.31
PDCD4-210ENST00000492932 PHF8Q9UPP1 1060 aa16.97■□□□□ 0.31
PDCD4-210ENST00000492932 RGS12O14924 1447 aa16.96■□□□□ 0.31
PDCD4-210ENST00000492932 DLC1Q96QB1 1528 aa16.95■□□□□ 0.3
PDCD4-210ENST00000492932 SPATA31A3Q5VYP0 1347 aa16.95■□□□□ 0.3
PDCD4-210ENST00000492932 TRAK1Q9UPV9 953 aa16.94■□□□□ 0.3
PDCD4-210ENST00000492932 EIF3AQ14152 1382 aaKnown RBP16.93■□□□□ 0.3
PDCD4-210ENST00000492932 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
PDCD4-210ENST00000492932 ATAD2Q6PL18 1390 aa16.92■□□□□ 0.3
PDCD4-210ENST00000492932 MARF1Q9Y4F3 1742 aaKnown RBP16.91■□□□□ 0.3
PDCD4-210ENST00000492932 ATRNO75882 1429 aa16.91■□□□□ 0.3
PDCD4-210ENST00000492932 TNS3Q68CZ2 1445 aa16.91■□□□□ 0.3
PDCD4-210ENST00000492932 ANKARQ7Z5J8 1434 aa16.91■□□□□ 0.3
PDCD4-210ENST00000492932 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
PDCD4-210ENST00000492932 HIRIP3Q9BW71 556 aaPredicted RBP16.9■□□□□ 0.3
PDCD4-210ENST00000492932 ARHGEF10O15013 1369 aa16.89■□□□□ 0.3
PDCD4-210ENST00000492932 ADGRB1O14514 1584 aa16.89■□□□□ 0.3
PDCD4-210ENST00000492932 PLEKHG5O94827 1062 aa16.89■□□□□ 0.29
PDCD4-210ENST00000492932 MINK1Q8N4C8 1332 aaPredicted RBP16.89■□□□□ 0.29
PDCD4-210ENST00000492932 RGPD8O14715 1765 aaPredicted RBP16.89■□□□□ 0.29
PDCD4-210ENST00000492932 ADGRB2O60241 1585 aa16.89■□□□□ 0.29
PDCD4-210ENST00000492932 SBNO1A3KN83 1393 aa16.89■□□□□ 0.29
PDCD4-210ENST00000492932 GPRASP1Q5JY77 1395 aa16.89■□□□□ 0.29
PDCD4-210ENST00000492932 UNC5CLQ8IV45 518 aa16.88■□□□□ 0.29
PDCD4-210ENST00000492932 GJD4Q96KN9 370 aaPredicted RBP16.88■□□□□ 0.29
PDCD4-210ENST00000492932 BCL9LQ86UU0 1499 aa16.87■□□□□ 0.29
PDCD4-210ENST00000492932 USP32Q8NFA0 1604 aa16.86■□□□□ 0.29
PDCD4-210ENST00000492932 WASLO00401 505 aaPredicted RBP16.85■□□□□ 0.29
PDCD4-210ENST00000492932 NGDNQ8NEJ9 315 aaKnown RBP16.85■□□□□ 0.29
PDCD4-210ENST00000492932 CABLES1Q8TDN4 633 aa16.84■□□□□ 0.29
PDCD4-210ENST00000492932 CCDC9Q9Y3X0 531 aaKnown RBP16.84■□□□□ 0.29
PDCD4-210ENST00000492932 TULP4Q9NRJ4 1543 aa16.84■□□□□ 0.29
PDCD4-210ENST00000492932 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.84■□□□□ 0.29
PDCD4-210ENST00000492932 SLIT2O94813 1529 aa16.83■□□□□ 0.28
PDCD4-210ENST00000492932 PAK3O75914 559 aaPredicted RBP16.81■□□□□ 0.28
PDCD4-210ENST00000492932 CCDC125Q86Z20 511 aa16.81■□□□□ 0.28
PDCD4-210ENST00000492932 RALGAPBQ86X10 1494 aa16.8■□□□□ 0.28
PDCD4-210ENST00000492932 PRR36Q9H6K5 1346 aa16.79■□□□□ 0.28
PDCD4-210ENST00000492932 VPS72Q15906 364 aa16.79■□□□□ 0.28
PDCD4-210ENST00000492932 ARHGEF28Q8N1W1 1705 aaKnown RBP16.79■□□□□ 0.28
PDCD4-210ENST00000492932 A0A0G2JS52 829 aa16.78■□□□□ 0.28
PDCD4-210ENST00000492932 MYT1Q01538 1121 aa16.78■□□□□ 0.28
PDCD4-210ENST00000492932 NUDT16Q96DE0 195 aaKnown RBP16.78■□□□□ 0.28
PDCD4-210ENST00000492932 ITSN1Q15811 1721 aa16.78■□□□□ 0.28
PDCD4-210ENST00000492932 PLCH1Q4KWH8 1693 aa16.78■□□□□ 0.28
PDCD4-210ENST00000492932 NWD2Q9ULI1 1742 aa16.77■□□□□ 0.28
PDCD4-210ENST00000492932 ABCA3Q99758 1704 aa16.76■□□□□ 0.27
PDCD4-210ENST00000492932 SF3B2Q13435 895 aaKnown RBP16.76■□□□□ 0.27
PDCD4-210ENST00000492932 CDK19Q9BWU1 502 aa16.76■□□□□ 0.27
PDCD4-210ENST00000492932 GLI3P10071 1580 aa16.76■□□□□ 0.27
PDCD4-210ENST00000492932 TRPM3Q9HCF6 1732 aaPredicted RBP16.76■□□□□ 0.27
PDCD4-210ENST00000492932 KIAA1210Q9ULL0 1709 aa16.76■□□□□ 0.27
PDCD4-210ENST00000492932 FAM83GA6ND36 823 aa16.75■□□□□ 0.27
PDCD4-210ENST00000492932 SEPT12Q8IYM1 358 aa16.75■□□□□ 0.27
PDCD4-210ENST00000492932 BTG4Q9NY30 223 aa16.74■□□□□ 0.27
PDCD4-210ENST00000492932 ZRANB1Q9UGI0 708 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms