RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 PRR7Q8TB68 274 aa8.4□□□□□ -1.06
SND1-216ENST00000492840 PCDHGC3Q9UN70 934 aa8.4□□□□□ -1.06
SND1-216ENST00000492840 NUDT7P0C024 238 aa8.39□□□□□ -1.07
SND1-216ENST00000492840 SOX11P35716 441 aa8.39□□□□□ -1.07
SND1-216ENST00000492840 LRRN4Q8WUT4 740 aa8.39□□□□□ -1.07
SND1-216ENST00000492840 PNMA3Q9UL41 463 aa8.39□□□□□ -1.07
SND1-216ENST00000492840 GNEQ9Y223 722 aaKnown RBP8.39□□□□□ -1.07
SND1-216ENST00000492840 MAFBQ9Y5Q3 323 aaPredicted RBP8.39□□□□□ -1.07
SND1-216ENST00000492840 CDCA8Q53HL2 280 aa8.38□□□□□ -1.07
SND1-216ENST00000492840 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
SND1-216ENST00000492840 TATDN2Q93075 761 aa8.38□□□□□ -1.07
SND1-216ENST00000492840 C7P10643 843 aa8.37□□□□□ -1.07
SND1-216ENST00000492840 GCGRP47871 477 aa8.37□□□□□ -1.07
SND1-216ENST00000492840 GUCA2AQ02747 115 aa8.37□□□□□ -1.07
SND1-216ENST00000492840 EPS8L1Q8TE68 723 aa8.37□□□□□ -1.07
SND1-216ENST00000492840 KHSRPQ92945 711 aaKnown RBP eCLIP8.37□□□□□ -1.073e-7■■■□□ 15.3
SND1-216ENST00000492840 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.37□□□□□ -1.07
SND1-216ENST00000492840 PPP1R3GB7ZBB8 358 aa8.36□□□□□ -1.07
SND1-216ENST00000492840 MTMR2Q13614 643 aa8.36□□□□□ -1.07
SND1-216ENST00000492840 HLA-CQ95604 372 aa8.36□□□□□ -1.07
SND1-216ENST00000492840 CFAP99D6REC4 459 aa8.35□□□□□ -1.07
SND1-216ENST00000492840 TBC1D9Q6ZT07 1266 aa8.35□□□□□ -1.07
SND1-216ENST00000492840 TSC1Q92574 1164 aa8.35□□□□□ -1.07
SND1-216ENST00000492840 METRNQ9UJH8 293 aa8.35□□□□□ -1.07
SND1-216ENST00000492840 TRIM6-TRIM34B2RNG4 842 aa8.34□□□□□ -1.07
SND1-216ENST00000492840 B4GALNT3Q6L9W6 998 aa8.34□□□□□ -1.07
SND1-216ENST00000492840 BCL2L12Q9HB09 334 aa8.34□□□□□ -1.07
SND1-216ENST00000492840 SCRIBQ14160 1630 aa8.33□□□□□ -1.08
SND1-216ENST00000492840 UNCXA6NJT0 531 aa8.33□□□□□ -1.08
SND1-216ENST00000492840 ATP9BO43861 1147 aa8.33□□□□□ -1.08
SND1-216ENST00000492840 SEMA3FQ13275 785 aa8.33□□□□□ -1.08
SND1-216ENST00000492840 ARSIQ5FYB1 569 aa8.33□□□□□ -1.08
SND1-216ENST00000492840 DCBLD2Q96PD2 775 aa8.33□□□□□ -1.08
SND1-216ENST00000492840 SMAPO00193 183 aa8.32□□□□□ -1.08
SND1-216ENST00000492840 PPP4R3BQ5MIZ7 849 aa8.32□□□□□ -1.08
SND1-216ENST00000492840 PACS2Q86VP3 889 aa8.32□□□□□ -1.08
SND1-216ENST00000492840 MYT1LQ9UL68 1186 aa8.32□□□□□ -1.08
SND1-216ENST00000492840 GABBR2O75899 941 aa8.31□□□□□ -1.08
SND1-216ENST00000492840 ELOAQ14241 798 aaKnown RBP8.31□□□□□ -1.08
SND1-216ENST00000492840 SLF2Q8IX21 1173 aa8.31□□□□□ -1.08
SND1-216ENST00000492840 ZMIZ1Q9ULJ6 1067 aa8.31□□□□□ -1.08
SND1-216ENST00000492840 SLC10A3P09131 477 aa8.3□□□□□ -1.08
SND1-216ENST00000492840 PTPREP23469 700 aa8.3□□□□□ -1.08
SND1-216ENST00000492840 NR6A1Q15406 480 aa8.3□□□□□ -1.08
SND1-216ENST00000492840 RSPH4AQ5TD94 716 aa8.3□□□□□ -1.08
SND1-216ENST00000492840 RBM47A0AV96 593 aaKnown RBP8.29□□□□□ -1.08
SND1-216ENST00000492840 DOK7Q18PE1 504 aa8.29□□□□□ -1.08
SND1-216ENST00000492840 KANK4Q5T7N3 995 aaPredicted RBP8.29□□□□□ -1.08
SND1-216ENST00000492840 TMEM164Q5U3C3 297 aa8.29□□□□□ -1.08
SND1-216ENST00000492840 TXNDC2Q86VQ3 553 aa8.29□□□□□ -1.08
SND1-216ENST00000492840 LHX6Q9UPM6 363 aa8.29□□□□□ -1.08
SND1-216ENST00000492840 C6orf229H3BNL8 230 aa8.28□□□□□ -1.08
SND1-216ENST00000492840 HOXB3P14651 431 aaPredicted RBP8.28□□□□□ -1.08
SND1-216ENST00000492840 EIF4G2P78344 907 aaKnown RBP eCLIP8.28□□□□□ -1.084e-7■■■■■ 27.6
SND1-216ENST00000492840 GPR153Q6NV75 609 aa8.28□□□□□ -1.08
SND1-216ENST00000492840 CCER1Q8TC90 406 aaPredicted RBP8.28□□□□□ -1.08
SND1-216ENST00000492840 STK32AQ8WU08 396 aa8.28□□□□□ -1.08
SND1-216ENST00000492840 PHLDB3Q6NSJ2 640 aa8.27□□□□□ -1.09
SND1-216ENST00000492840 PNMA1Q8ND90 353 aa8.27□□□□□ -1.09
SND1-216ENST00000492840 ZSWIM6Q9HCJ5 1215 aa8.27□□□□□ -1.09
SND1-216ENST00000492840 IGSF5Q9NSI5 407 aa8.27□□□□□ -1.09
SND1-216ENST00000492840 PSDA5PKW4 1024 aaPredicted RBP8.26□□□□□ -1.09
SND1-216ENST00000492840 PROX2Q3B8N5 592 aa8.26□□□□□ -1.09
SND1-216ENST00000492840 NOVA2Q9UNW9 492 aaKnown RBP8.26□□□□□ -1.09
SND1-216ENST00000492840 THOC2Q8NI27 1593 aaKnown RBP8.26□□□□□ -1.09
SND1-216ENST00000492840 PIK3CDO00329 1044 aa8.25□□□□□ -1.09
SND1-216ENST00000492840 PER1O15534 1290 aaPredicted RBP8.25□□□□□ -1.09
SND1-216ENST00000492840 SWT1Q5T5J6 900 aaKnown RBP8.25□□□□□ -1.09
SND1-216ENST00000492840 RIMBP2O15034 1052 aa8.24□□□□□ -1.09
SND1-216ENST00000492840 NR1H3Q13133 447 aa8.24□□□□□ -1.09
SND1-216ENST00000492840 DNAJC14Q6Y2X3 702 aaPredicted RBP8.24□□□□□ -1.09
SND1-216ENST00000492840 USP35Q9P2H5 1018 aa8.24□□□□□ -1.09
SND1-216ENST00000492840 DCAF1Q9Y4B6 1507 aa8.24□□□□□ -1.09
SND1-216ENST00000492840 USP17L3A6NCW0 530 aa8.23□□□□□ -1.09
SND1-216ENST00000492840 USP17L4A6NCW7 530 aa8.23□□□□□ -1.09
SND1-216ENST00000492840 FUT2Q10981 343 aa8.23□□□□□ -1.09
SND1-216ENST00000492840 GRIPAP1Q4V328 841 aa8.23□□□□□ -1.09
SND1-216ENST00000492840 USP17L2Q6R6M4 530 aa8.23□□□□□ -1.09
SND1-216ENST00000492840 USP17L1Q7RTZ2 530 aa8.23□□□□□ -1.09
SND1-216ENST00000492840 NFATC2IPQ8NCF5 419 aa8.23□□□□□ -1.09
SND1-216ENST00000492840 SYMPKQ92797 1274 aaKnown RBP8.23□□□□□ -1.09
SND1-216ENST00000492840 ERCC3P19447 782 aa8.22□□□□□ -1.09
SND1-216ENST00000492840 PLEKHM2Q8IWE5 1019 aa8.22□□□□□ -1.09
SND1-216ENST00000492840 KIAA1522Q9P206 1035 aaPredicted RBP8.22□□□□□ -1.09
SND1-216ENST00000492840 FBXO45P0C2W1 286 aa8.21□□□□□ -1.1
SND1-216ENST00000492840 SSFA2P28290 1259 aa8.21□□□□□ -1.1
SND1-216ENST00000492840 SLAIN2Q9P270 581 aa8.21□□□□□ -1.1
SND1-216ENST00000492840 FAM196BA6NMK8 535 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 USP17L5A8MUK1 530 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 USP17L15C9J2P7 530 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 USP17L10C9JJH3 530 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 USP17L13C9JLJ4 530 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 USP17L12C9JPN9 530 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 USP17L11C9JVI0 530 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 USP17L21D6R901 530 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 USP17L18D6R9N7 530 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 USP17L22D6RA61 530 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 USP17L17D6RBQ6 530 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 USP17L19D6RCP7 530 aa8.2□□□□□ -1.1
SND1-216ENST00000492840 USP17L20D6RJB6 530 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms