RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 C8orf37Q96NL8 207 aa12.94□□□□□ -0.34
NUP50-217ENST00000491860 TECPR2O15040 1411 aa12.94□□□□□ -0.34
NUP50-217ENST00000491860 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
NUP50-217ENST00000491860 RGL3Q3MIN7 710 aa12.93□□□□□ -0.34
NUP50-217ENST00000491860 CDC42BPGQ6DT37 1551 aa12.93□□□□□ -0.34
NUP50-217ENST00000491860 KNDC1Q76NI1 1749 aa12.93□□□□□ -0.34
NUP50-217ENST00000491860 PIK3C2GO75747 1445 aa12.92□□□□□ -0.34
NUP50-217ENST00000491860 LRPPRCP42704 1394 aaKnown RBP12.92□□□□□ -0.34
NUP50-217ENST00000491860 ABCC11Q96J66 1382 aa12.92□□□□□ -0.34
NUP50-217ENST00000491860 COL22A1Q8NFW1 1626 aaPredicted RBP12.91□□□□□ -0.34
NUP50-217ENST00000491860 ADGRF5Q8IZF2 1346 aa12.91□□□□□ -0.34
NUP50-217ENST00000491860 HRCP23327 699 aa12.91□□□□□ -0.34
NUP50-217ENST00000491860 SIRT1Q96EB6 747 aa12.91□□□□□ -0.34
NUP50-217ENST00000491860 MYOM2P54296 1465 aa12.91□□□□□ -0.34
NUP50-217ENST00000491860 SOS2Q07890 1332 aaPredicted RBP12.9□□□□□ -0.34
NUP50-217ENST00000491860 STAC3Q96MF2 364 aa12.9□□□□□ -0.34
NUP50-217ENST00000491860 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
NUP50-217ENST00000491860 EP400Q96L91 3159 aa12.89□□□□□ -0.35
NUP50-217ENST00000491860 FNBP4Q8N3X1 1017 aaPredicted RBP12.89□□□□□ -0.35
NUP50-217ENST00000491860 DDX17Q92841 729 aaKnown RBP12.89□□□□□ -0.35
NUP50-217ENST00000491860 RAB3GAP2Q9H2M9 1393 aa12.89□□□□□ -0.35
NUP50-217ENST00000491860 ATRNO75882 1429 aa12.88□□□□□ -0.35
NUP50-217ENST00000491860 TRPC5Q9UL62 973 aaPredicted RBP12.88□□□□□ -0.35
NUP50-217ENST00000491860 NRXN1Q9ULB1 1477 aa12.88□□□□□ -0.35
NUP50-217ENST00000491860 YTHDC2Q9H6S0 1430 aaKnown RBP12.88□□□□□ -0.35
NUP50-217ENST00000491860 DHX57Q6P158 1386 aaKnown RBP12.87□□□□□ -0.35
NUP50-217ENST00000491860 CCDC125Q86Z20 511 aa12.87□□□□□ -0.35
NUP50-217ENST00000491860 C14orf93Q9H972 538 aaKnown RBP12.87□□□□□ -0.35
NUP50-217ENST00000491860 USP21Q9UK80 565 aa12.87□□□□□ -0.35
NUP50-217ENST00000491860 ADAMTS2O95450 1211 aa12.86□□□□□ -0.35
NUP50-217ENST00000491860 ORAI2Q96SN7 254 aa12.86□□□□□ -0.35
NUP50-217ENST00000491860 STK26Q9P289 416 aa12.86□□□□□ -0.35
NUP50-217ENST00000491860 ZRANB1Q9UGI0 708 aa12.86□□□□□ -0.35
NUP50-217ENST00000491860 MARF1Q9Y4F3 1742 aaKnown RBP12.85□□□□□ -0.35
NUP50-217ENST00000491860 ESCO1Q5FWF5 840 aa12.85□□□□□ -0.35
NUP50-217ENST00000491860 KIF1AQ12756 1690 aa12.85□□□□□ -0.35
NUP50-217ENST00000491860 FMN2Q9NZ56 1722 aa12.84□□□□□ -0.35
NUP50-217ENST00000491860 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.83□□□□□ -0.36
NUP50-217ENST00000491860 TMEM132EQ6IEE7 984 aa12.83□□□□□ -0.36
NUP50-217ENST00000491860 BCL9LQ86UU0 1499 aa12.83□□□□□ -0.36
NUP50-217ENST00000491860 DLC1Q96QB1 1528 aa12.83□□□□□ -0.36
NUP50-217ENST00000491860 WAPLQ7Z5K2 1190 aa12.82□□□□□ -0.36
NUP50-217ENST00000491860 PXDNQ92626 1479 aa12.81□□□□□ -0.36
NUP50-217ENST00000491860 EIF3AQ14152 1382 aaKnown RBP12.81□□□□□ -0.36
NUP50-217ENST00000491860 CFAP70Q5T0N1 1121 aa12.8□□□□□ -0.36
NUP50-217ENST00000491860 FOXO3O43524 673 aa12.79□□□□□ -0.36
NUP50-217ENST00000491860 PSME1Q06323 249 aa12.79□□□□□ -0.36
NUP50-217ENST00000491860 POGKQ9P215 609 aa12.79□□□□□ -0.36
NUP50-217ENST00000491860 PLEKHH1Q9ULM0 1364 aa12.79□□□□□ -0.36
NUP50-217ENST00000491860 BLMP54132 1417 aaPredicted RBP12.78□□□□□ -0.36
NUP50-217ENST00000491860 ANKARQ7Z5J8 1434 aa12.78□□□□□ -0.36
NUP50-217ENST00000491860 ADGRB2O60241 1585 aa12.77□□□□□ -0.36
NUP50-217ENST00000491860 GJD4Q96KN9 370 aaPredicted RBP12.77□□□□□ -0.37
NUP50-217ENST00000491860 PRAM1Q96QH2 718 aa12.77□□□□□ -0.37
NUP50-217ENST00000491860 LRP5O75197 1615 aa12.77□□□□□ -0.37
NUP50-217ENST00000491860 DCAF11Q8TEB1 546 aa12.76□□□□□ -0.37
NUP50-217ENST00000491860 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
NUP50-217ENST00000491860 SPATA31A3Q5VYP0 1347 aa12.76□□□□□ -0.37
NUP50-217ENST00000491860 SLIT2O94813 1529 aa12.76□□□□□ -0.37
NUP50-217ENST00000491860 ADGRB1O14514 1584 aa12.76□□□□□ -0.37
NUP50-217ENST00000491860 GLI3P10071 1580 aa12.76□□□□□ -0.37
NUP50-217ENST00000491860 NUTM2FA1L443 756 aa12.75□□□□□ -0.37
NUP50-217ENST00000491860 KRT28Q7Z3Y7 464 aa12.75□□□□□ -0.37
NUP50-217ENST00000491860 RALGAPBQ86X10 1494 aa12.74□□□□□ -0.37
NUP50-217ENST00000491860 SBNO1A3KN83 1393 aa12.74□□□□□ -0.37
NUP50-217ENST00000491860 ARHGEF10O15013 1369 aa12.74□□□□□ -0.37
NUP50-217ENST00000491860 RGPD8O14715 1765 aaPredicted RBP12.74□□□□□ -0.37
NUP50-217ENST00000491860 TNS3Q68CZ2 1445 aa12.73□□□□□ -0.37
NUP50-217ENST00000491860 UNC5CLQ8IV45 518 aa12.73□□□□□ -0.37
NUP50-217ENST00000491860 KDM2AQ9Y2K7 1162 aa12.73□□□□□ -0.37
NUP50-217ENST00000491860 BRWD3Q6RI45 1802 aa12.73□□□□□ -0.37
NUP50-217ENST00000491860 USP32Q8NFA0 1604 aa12.73□□□□□ -0.37
NUP50-217ENST00000491860 KIAA1210Q9ULL0 1709 aa12.72□□□□□ -0.37
NUP50-217ENST00000491860 HAP1P54257 671 aaPredicted RBP12.72□□□□□ -0.37
NUP50-217ENST00000491860 XPCQ01831 940 aaPredicted RBP12.72□□□□□ -0.37
NUP50-217ENST00000491860 SAFB2Q14151 953 aaKnown RBP eCLIP12.72□□□□□ -0.37
NUP50-217ENST00000491860 TRAK1Q9UPV9 953 aa12.72□□□□□ -0.37
NUP50-217ENST00000491860 TULP4Q9NRJ4 1543 aa12.71□□□□□ -0.38
NUP50-217ENST00000491860 NWD2Q9ULI1 1742 aa12.71□□□□□ -0.38
NUP50-217ENST00000491860 GPRASP1Q5JY77 1395 aa12.7□□□□□ -0.38
NUP50-217ENST00000491860 ITSN1Q15811 1721 aa12.7□□□□□ -0.38
NUP50-217ENST00000491860 WASLO00401 505 aaPredicted RBP12.69□□□□□ -0.38
NUP50-217ENST00000491860 ONECUT3O60422 494 aaPredicted RBP12.69□□□□□ -0.38
NUP50-217ENST00000491860 ARHGEF28Q8N1W1 1705 aaKnown RBP12.68□□□□□ -0.38
NUP50-217ENST00000491860 PLCH1Q4KWH8 1693 aa12.67□□□□□ -0.38
NUP50-217ENST00000491860 MINK1Q8N4C8 1332 aaPredicted RBP12.67□□□□□ -0.38
NUP50-217ENST00000491860 SF3B2Q13435 895 aaKnown RBP12.67□□□□□ -0.38
NUP50-217ENST00000491860 VPS72Q15906 364 aa12.67□□□□□ -0.38
NUP50-217ENST00000491860 ABCA3Q99758 1704 aa12.66□□□□□ -0.38
NUP50-217ENST00000491860 LMOD2Q6P5Q4 547 aa12.66□□□□□ -0.38
NUP50-217ENST00000491860 DEFB132Q7Z7B7 95 aa12.66□□□□□ -0.38
NUP50-217ENST00000491860 NGDNQ8NEJ9 315 aaKnown RBP12.66□□□□□ -0.38
NUP50-217ENST00000491860 PMFBP1Q8TBY8 1022 aa12.66□□□□□ -0.38
NUP50-217ENST00000491860 SEPT12Q8IYM1 358 aa12.65□□□□□ -0.38
NUP50-217ENST00000491860 HIRIP3Q9BW71 556 aaPredicted RBP12.65□□□□□ -0.38
NUP50-217ENST00000491860 TRPM3Q9HCF6 1732 aaPredicted RBP12.65□□□□□ -0.38
NUP50-217ENST00000491860 ALS2Q96Q42 1657 aa12.64□□□□□ -0.39
NUP50-217ENST00000491860 KRT27Q7Z3Y8 459 aa12.63□□□□□ -0.39
NUP50-217ENST00000491860 ATP7BP35670 1465 aa12.62□□□□□ -0.39
NUP50-217ENST00000491860 NUDT16Q96DE0 195 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms