RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 WAPLQ7Z5K2 1190 aa33.5■■■□□ 2.95
CPNE9-204ENST00000491802 TONSLQ96HA7 1378 aa33.48■■■□□ 2.95
CPNE9-204ENST00000491802 BRINP3Q76B58 766 aa33.47■■■□□ 2.95
CPNE9-204ENST00000491802 COL16A1Q07092 1604 aaPredicted RBP33.46■■■□□ 2.95
CPNE9-204ENST00000491802 C1orf167Q5SNV9 1468 aa33.46■■■□□ 2.95
CPNE9-204ENST00000491802 NHSL1Q5SYE7 1610 aa33.46■■■□□ 2.95
CPNE9-204ENST00000491802 TRAK1Q9UPV9 953 aa33.44■■■□□ 2.94
CPNE9-204ENST00000491802 PRAM1Q96QH2 718 aa33.42■■■□□ 2.94
CPNE9-204ENST00000491802 FMN2Q9NZ56 1722 aa33.41■■■□□ 2.94
CPNE9-204ENST00000491802 ARHGEF28Q8N1W1 1705 aaKnown RBP33.39■■■□□ 2.94
CPNE9-204ENST00000491802 TRPM1Q7Z4N2 1603 aa33.39■■■□□ 2.94
CPNE9-204ENST00000491802 ADGRB2O60241 1585 aa33.39■■■□□ 2.94
CPNE9-204ENST00000491802 MED1Q15648 1581 aaPredicted RBP33.39■■■□□ 2.94
CPNE9-204ENST00000491802 NBPF1Q3BBV0 1214 aa33.38■■■□□ 2.93
CPNE9-204ENST00000491802 SAFB2Q14151 953 aaKnown RBP eCLIP33.37■■■□□ 2.93
CPNE9-204ENST00000491802 POGKQ9P215 609 aa33.37■■■□□ 2.93
CPNE9-204ENST00000491802 CLSPNQ9HAW4 1339 aa33.35■■■□□ 2.93
CPNE9-204ENST00000491802 JCADQ9P266 1359 aa33.34■■■□□ 2.93
CPNE9-204ENST00000491802 SHPRHQ149N8 1683 aa33.32■■■□□ 2.92
CPNE9-204ENST00000491802 NBPF8Q3BBV2 869 aa33.3■■■□□ 2.92
CPNE9-204ENST00000491802 CCER1Q8TC90 406 aaPredicted RBP33.29■■■□□ 2.92
CPNE9-204ENST00000491802 ROCK2O75116 1388 aaKnown RBP33.29■■■□□ 2.92
CPNE9-204ENST00000491802 DISP3Q9P2K9 1392 aa33.29■■■□□ 2.92
CPNE9-204ENST00000491802 ORAI2Q96SN7 254 aa33.27■■■□□ 2.92
CPNE9-204ENST00000491802 KIF1AQ12756 1690 aa33.26■■■□□ 2.91
CPNE9-204ENST00000491802 MINK1Q8N4C8 1332 aaPredicted RBP33.25■■■□□ 2.91
CPNE9-204ENST00000491802 NUTM2FA1L443 756 aa33.24■■■□□ 2.91
CPNE9-204ENST00000491802 RALGAPBQ86X10 1494 aa33.24■■■□□ 2.91
CPNE9-204ENST00000491802 ANKARQ7Z5J8 1434 aa33.23■■■□□ 2.91
CPNE9-204ENST00000491802 HIRIP3Q9BW71 556 aaPredicted RBP33.23■■■□□ 2.91
CPNE9-204ENST00000491802 RGPD8O14715 1765 aaPredicted RBP33.22■■■□□ 2.91
CPNE9-204ENST00000491802 SOS2Q07890 1332 aaPredicted RBP33.22■■■□□ 2.91
CPNE9-204ENST00000491802 SPATA31A6Q5VVP1 1343 aa33.2■■■□□ 2.91
CPNE9-204ENST00000491802 USP32Q8NFA0 1604 aa33.2■■■□□ 2.9
CPNE9-204ENST00000491802 EIF3AQ14152 1382 aaKnown RBP33.2■■■□□ 2.9
CPNE9-204ENST00000491802 GPRASP1Q5JY77 1395 aa33.2■■■□□ 2.9
CPNE9-204ENST00000491802 ESCO1Q5FWF5 840 aa33.19■■■□□ 2.9
CPNE9-204ENST00000491802 LRRC59Q96AG4 307 aaKnown RBP33.19■■■□□ 2.9
CPNE9-204ENST00000491802 NPHP3Q7Z494 1330 aa33.17■■■□□ 2.9
CPNE9-204ENST00000491802 TULP4Q9NRJ4 1543 aa33.16■■■□□ 2.9
CPNE9-204ENST00000491802 PXDNQ92626 1479 aa33.15■■■□□ 2.9
CPNE9-204ENST00000491802 DDX17Q92841 729 aaKnown RBP33.15■■■□□ 2.9
CPNE9-204ENST00000491802 CENPJQ9HC77 1338 aaPredicted RBP33.15■■■□□ 2.9
CPNE9-204ENST00000491802 QRICH2Q9H0J4 1663 aa33.14■■■□□ 2.9
CPNE9-204ENST00000491802 WASLO00401 505 aaPredicted RBP33.13■■■□□ 2.89
CPNE9-204ENST00000491802 TIMELESSQ9UNS1 1208 aa33.11■■■□□ 2.89
CPNE9-204ENST00000491802 PNPLA6Q8IY17 1366 aa33.1■■■□□ 2.89
CPNE9-204ENST00000491802 CARD11Q9BXL7 1154 aa33.1■■■□□ 2.89
CPNE9-204ENST00000491802 COL22A1Q8NFW1 1626 aaPredicted RBP33.09■■■□□ 2.89
CPNE9-204ENST00000491802 ITSN1Q15811 1721 aa33.08■■■□□ 2.89
CPNE9-204ENST00000491802 LRP6O75581 1613 aa33.07■■■□□ 2.88
CPNE9-204ENST00000491802 FOXO3O43524 673 aa33.07■■■□□ 2.88
CPNE9-204ENST00000491802 PHF8Q9UPP1 1060 aa33.07■■■□□ 2.88
CPNE9-204ENST00000491802 PRR36Q9H6K5 1346 aa33.05■■■□□ 2.88
CPNE9-204ENST00000491802 ATP7BP35670 1465 aa33.05■■■□□ 2.88
CPNE9-204ENST00000491802 PHF23Q9BUL5 403 aaPredicted RBP33.04■■■□□ 2.88
CPNE9-204ENST00000491802 TOPAZ1Q8N9V7 1692 aa33.01■■■□□ 2.88
CPNE9-204ENST00000491802 CDK19Q9BWU1 502 aa33.01■■■□□ 2.87
CPNE9-204ENST00000491802 XPCQ01831 940 aaPredicted RBP32.98■■■□□ 2.87
CPNE9-204ENST00000491802 SBNO1A3KN83 1393 aa32.96■■■□□ 2.87
CPNE9-204ENST00000491802 KRT28Q7Z3Y7 464 aa32.95■■■□□ 2.87
CPNE9-204ENST00000491802 PMFBP1Q8TBY8 1022 aa32.95■■■□□ 2.87
CPNE9-204ENST00000491802 NUDT16Q96DE0 195 aaKnown RBP32.95■■■□□ 2.87
CPNE9-204ENST00000491802 RGS17Q9UGC6 210 aaPredicted RBP32.95■■■□□ 2.87
CPNE9-204ENST00000491802 PSME1Q06323 249 aa32.94■■■□□ 2.86
CPNE9-204ENST00000491802 SPATA31A3Q5VYP0 1347 aa32.94■■■□□ 2.86
CPNE9-204ENST00000491802 SBNO2Q9Y2G9 1366 aa32.94■■■□□ 2.86
CPNE9-204ENST00000491802 TRPM3Q9HCF6 1732 aaPredicted RBP32.94■■■□□ 2.86
CPNE9-204ENST00000491802 SRPK2P78362 688 aaKnown RBP32.93■■■□□ 2.86
CPNE9-204ENST00000491802 ILDR2Q71H61 639 aa32.93■■■□□ 2.86
CPNE9-204ENST00000491802 TNS3Q68CZ2 1445 aa32.92■■■□□ 2.86
CPNE9-204ENST00000491802 EVC2Q86UK5 1308 aa32.91■■■□□ 2.86
CPNE9-204ENST00000491802 CABP2Q9NPB3 220 aa32.9■■■□□ 2.86
CPNE9-204ENST00000491802 CCDC61Q9Y6R9 512 aa32.9■■■□□ 2.86
CPNE9-204ENST00000491802 POLR3AO14802 1390 aaPredicted RBP32.87■■■□□ 2.85
CPNE9-204ENST00000491802 NUTM2BA6NNL0 878 aaPredicted RBP32.87■■■□□ 2.85
CPNE9-204ENST00000491802 NUTM2EB1AL46 878 aaPredicted RBP32.87■■■□□ 2.85
CPNE9-204ENST00000491802 MEX3CQ5U5Q3 659 aaKnown RBP32.87■■■□□ 2.85
CPNE9-204ENST00000491802 NUTM2AQ8IVF1 878 aaPredicted RBP32.87■■■□□ 2.85
CPNE9-204ENST00000491802 MARF1Q9Y4F3 1742 aaKnown RBP32.87■■■□□ 2.85
CPNE9-204ENST00000491802 ALS2Q96Q42 1657 aa32.87■■■□□ 2.85
CPNE9-204ENST00000491802 PLEKHG3A1L390 1219 aa32.86■■■□□ 2.85
CPNE9-204ENST00000491802 ARHGEF10O15013 1369 aa32.85■■■□□ 2.85
CPNE9-204ENST00000491802 USP47Q96K76 1375 aa32.85■■■□□ 2.85
CPNE9-204ENST00000491802 NGDNQ8NEJ9 315 aaKnown RBP32.85■■■□□ 2.85
CPNE9-204ENST00000491802 PPIP5K1Q6PFW1 1433 aa32.84■■■□□ 2.85
CPNE9-204ENST00000491802 ST20-MTHFSA0A0A6YYL1 179 aa32.8■■■□□ 2.84
CPNE9-204ENST00000491802 ZNF772Q68DY9 489 aaPredicted RBP32.8■■■□□ 2.84
CPNE9-204ENST00000491802 ABCA3Q99758 1704 aa32.8■■■□□ 2.84
CPNE9-204ENST00000491802 ACEP12821 1306 aa32.77■■■□□ 2.84
CPNE9-204ENST00000491802 POTEAQ6S8J7 498 aa32.77■■■□□ 2.84
CPNE9-204ENST00000491802 ATAD2Q6PL18 1390 aa32.76■■■□□ 2.83
CPNE9-204ENST00000491802 TESK2Q96S53 571 aa32.76■■■□□ 2.83
CPNE9-204ENST00000491802 BRD4O60885 1362 aaPredicted RBP32.74■■■□□ 2.83
CPNE9-204ENST00000491802 CRYBG1Q9Y4K1 1723 aa32.73■■■□□ 2.83
CPNE9-204ENST00000491802 AFF2P51816 1311 aa32.73■■■□□ 2.83
CPNE9-204ENST00000491802 ADAMTS2O95450 1211 aa32.72■■■□□ 2.83
CPNE9-204ENST00000491802 LMOD2Q6P5Q4 547 aa32.72■■■□□ 2.83
CPNE9-204ENST00000491802 C8orf37Q96NL8 207 aa32.72■■■□□ 2.83
CPNE9-204ENST00000491802 CABP1Q9NZU7 370 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms