RNA–Protein interactions for RNA: ENST00000491658.1

TFRC-215, Transcript of transferrin receptor, humanhuman

TSL 5

Gene TFRC, Length 396 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-215ENST00000491658 MSS51Q4VC12 460 aa8.69□□□□□ -1.02
TFRC-215ENST00000491658 MYSM1Q5VVJ2 828 aa8.69□□□□□ -1.02
TFRC-215ENST00000491658 FAM160A2Q8N612 972 aaPredicted RBP8.69□□□□□ -1.02
TFRC-215ENST00000491658 PLEKHG3A1L390 1219 aa8.68□□□□□ -1.02
TFRC-215ENST00000491658 SPTLC1O15269 473 aa8.68□□□□□ -1.02
TFRC-215ENST00000491658 RNF223E7ERA6 249 aa8.67□□□□□ -1.02
TFRC-215ENST00000491658 RIC3Q7Z5B4 369 aa8.67□□□□□ -1.02
TFRC-215ENST00000491658 SYMPKQ92797 1274 aaKnown RBP8.67□□□□□ -1.02
TFRC-215ENST00000491658 USB1Q9BQ65 265 aaKnown RBP8.67□□□□□ -1.02
TFRC-215ENST00000491658 RGS20O76081 388 aa8.66□□□□□ -1.02
TFRC-215ENST00000491658 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
TFRC-215ENST00000491658 PRDM9Q9NQV7 894 aa8.66□□□□□ -1.02
TFRC-215ENST00000491658 LIMD1Q9UGP4 676 aa8.66□□□□□ -1.02
TFRC-215ENST00000491658 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
TFRC-215ENST00000491658 PPEF1O14829 653 aaPredicted RBP8.65□□□□□ -1.02
TFRC-215ENST00000491658 RETREG3Q86VR2 466 aa8.65□□□□□ -1.02
TFRC-215ENST00000491658 PCDHB15Q9Y5E8 787 aa8.65□□□□□ -1.02
TFRC-215ENST00000491658 CLK2P49760 499 aaKnown RBP8.64□□□□□ -1.03
TFRC-215ENST00000491658 TUSC1Q2TAM9 212 aa8.64□□□□□ -1.03
TFRC-215ENST00000491658 SH3D19Q5HYK7 790 aa8.64□□□□□ -1.03
TFRC-215ENST00000491658 ANKLE1Q8NAG6 615 aa8.64□□□□□ -1.03
TFRC-215ENST00000491658 MMP16P51512 607 aa8.63□□□□□ -1.03
TFRC-215ENST00000491658 MTMR2Q13614 643 aa8.63□□□□□ -1.03
TFRC-215ENST00000491658 DXOO77932 396 aaKnown RBP8.62□□□□□ -1.03
TFRC-215ENST00000491658 PRPF38BQ5VTL8 546 aaKnown RBP8.62□□□□□ -1.03
TFRC-215ENST00000491658 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
TFRC-215ENST00000491658 SPDYE5A6NIY4 337 aa8.61□□□□□ -1.03
TFRC-215ENST00000491658 HRCP23327 699 aa8.61□□□□□ -1.03
TFRC-215ENST00000491658 SKIV2LQ15477 1246 aaKnown RBP8.61□□□□□ -1.03
TFRC-215ENST00000491658 CSPP1Q1MSJ5 1256 aa8.61□□□□□ -1.03
TFRC-215ENST00000491658 ZBTB3Q9H5J0 574 aa8.61□□□□□ -1.03
TFRC-215ENST00000491658 JUNDP17535 347 aa8.6□□□□□ -1.03
TFRC-215ENST00000491658 QPCTQ16769 361 aa8.6□□□□□ -1.03
TFRC-215ENST00000491658 IL27Q8NEV9 243 aa8.6□□□□□ -1.03
TFRC-215ENST00000491658 CABLES1Q8TDN4 633 aa8.6□□□□□ -1.03
TFRC-215ENST00000491658 FCF1Q9Y324 198 aaKnown RBP8.6□□□□□ -1.03
TFRC-215ENST00000491658 LILRB3O75022 631 aa8.59□□□□□ -1.03
TFRC-215ENST00000491658 PLA2G2CQ5R387 149 aa8.59□□□□□ -1.03
TFRC-215ENST00000491658 PRR7Q8TB68 274 aa8.59□□□□□ -1.03
TFRC-215ENST00000491658 EMID1Q96A84 441 aaPredicted RBP8.59□□□□□ -1.03
TFRC-215ENST00000491658 PRKD2Q9BZL6 878 aa8.59□□□□□ -1.03
TFRC-215ENST00000491658 GOPCQ9HD26 462 aa8.58□□□□□ -1.04
TFRC-215ENST00000491658 V9GY48 417 aaPredicted RBP8.58□□□□□ -1.04
TFRC-215ENST00000491658 CFAP99D6REC4 459 aa8.57□□□□□ -1.04
TFRC-215ENST00000491658 PROCA1Q8NCQ7 364 aaPredicted RBP8.57□□□□□ -1.04
TFRC-215ENST00000491658 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.57□□□□□ -1.04
TFRC-215ENST00000491658 DESI1Q6ICB0 168 aa8.56□□□□□ -1.04
TFRC-215ENST00000491658 NUTM2BA6NNL0 878 aaPredicted RBP8.55□□□□□ -1.04
TFRC-215ENST00000491658 NUTM2EB1AL46 878 aaPredicted RBP8.55□□□□□ -1.04
TFRC-215ENST00000491658 SLC19A1P41440 591 aa8.55□□□□□ -1.04
TFRC-215ENST00000491658 RTL5Q5HYW3 569 aaPredicted RBP8.55□□□□□ -1.04
TFRC-215ENST00000491658 NUTM2DQ5VT03 806 aaPredicted RBP8.55□□□□□ -1.04
TFRC-215ENST00000491658 LIAT1Q6ZQX7 453 aa8.55□□□□□ -1.04
TFRC-215ENST00000491658 NUTM2AQ8IVF1 878 aaPredicted RBP8.55□□□□□ -1.04
TFRC-215ENST00000491658 PTPRNQ16849 979 aa8.54□□□□□ -1.04
TFRC-215ENST00000491658 FBXO31Q5XUX0 539 aaPredicted RBP8.54□□□□□ -1.04
TFRC-215ENST00000491658 NUDT12Q9BQG2 462 aa8.54□□□□□ -1.04
TFRC-215ENST00000491658 PPP2R2DQ66LE6 453 aa8.53□□□□□ -1.04
TFRC-215ENST00000491658 RPIAP49247 311 aa8.52□□□□□ -1.05
TFRC-215ENST00000491658 CCDC24Q8N4L8 307 aa8.52□□□□□ -1.05
TFRC-215ENST00000491658 PCMTD1Q96MG8 357 aaPredicted RBP8.52□□□□□ -1.05
TFRC-215ENST00000491658 CCNYL3P0C7X3 344 aa8.51□□□□□ -1.05
TFRC-215ENST00000491658 SPRYD7Q5W111 196 aa8.51□□□□□ -1.05
TFRC-215ENST00000491658 LYPD8Q6UX82 237 aa8.51□□□□□ -1.05
TFRC-215ENST00000491658 ATP1B4Q9UN42 357 aaPredicted RBP8.51□□□□□ -1.05
TFRC-215ENST00000491658 HELBQ8NG08 1087 aaPredicted RBP8.5□□□□□ -1.05
TFRC-215ENST00000491658 TSC1Q92574 1164 aa8.5□□□□□ -1.05
TFRC-215ENST00000491658 ZBTB24O43167 697 aaPredicted RBP8.49□□□□□ -1.05
TFRC-215ENST00000491658 ZNF598Q86UK7 904 aaKnown RBP8.49□□□□□ -1.05
TFRC-215ENST00000491658 EVA1BQ9NVM1 165 aa8.49□□□□□ -1.05
TFRC-215ENST00000491658 PER1O15534 1290 aaPredicted RBP8.48□□□□□ -1.05
TFRC-215ENST00000491658 ZNF697Q5TEC3 545 aa8.48□□□□□ -1.05
TFRC-215ENST00000491658 PTCRAQ6ISU1 281 aaPredicted RBP8.48□□□□□ -1.05
TFRC-215ENST00000491658 F12P00748 615 aaPredicted RBP8.47□□□□□ -1.05
TFRC-215ENST00000491658 KCNH2Q12809 1159 aa8.47□□□□□ -1.05
TFRC-215ENST00000491658 TRIM32Q13049 653 aa8.47□□□□□ -1.05
TFRC-215ENST00000491658 CD2BP2O95400 341 aaKnown RBP8.46□□□□□ -1.06
TFRC-215ENST00000491658 RFC5P40937 340 aa8.46□□□□□ -1.06
TFRC-215ENST00000491658 CTDSPL2Q05D32 466 aa8.45□□□□□ -1.06
TFRC-215ENST00000491658 UNC93B1Q9H1C4 597 aa8.45□□□□□ -1.06
TFRC-215ENST00000491658 MAP10Q9P2G4 905 aa8.45□□□□□ -1.06
TFRC-215ENST00000491658 CTHP32929 405 aa8.44□□□□□ -1.06
TFRC-215ENST00000491658 TRIM67Q6ZTA4 783 aa8.44□□□□□ -1.06
TFRC-215ENST00000491658 IRX2Q9BZI1 471 aaPredicted RBP8.44□□□□□ -1.06
TFRC-215ENST00000491658 AP1G2O75843 785 aa8.43□□□□□ -1.06
TFRC-215ENST00000491658 GDF9O60383 454 aa8.42□□□□□ -1.06
TFRC-215ENST00000491658 LRRN4Q8WUT4 740 aa8.42□□□□□ -1.06
TFRC-215ENST00000491658 PKD2L1Q9P0L9 805 aa8.42□□□□□ -1.06
TFRC-215ENST00000491658 USP17L8P0C7I0 530 aa8.41□□□□□ -1.06
TFRC-215ENST00000491658 WNT7BP56706 349 aa8.41□□□□□ -1.06
TFRC-215ENST00000491658 SKOR1P84550 965 aa8.41□□□□□ -1.06
TFRC-215ENST00000491658 PRR20EP86478 221 aa8.41□□□□□ -1.06
TFRC-215ENST00000491658 PRR20CP86479 221 aa8.41□□□□□ -1.06
TFRC-215ENST00000491658 PRR20DP86480 221 aa8.41□□□□□ -1.06
TFRC-215ENST00000491658 PRR20BP86481 221 aa8.41□□□□□ -1.06
TFRC-215ENST00000491658 PRR20AP86496 221 aa8.41□□□□□ -1.06
TFRC-215ENST00000491658 PDZRN3Q9UPQ7 1066 aa8.41□□□□□ -1.06
TFRC-215ENST00000491658 TMEM259Q4ZIN3 620 aa8.4□□□□□ -1.06
TFRC-215ENST00000491658 TNFRSF10AO00220 468 aa8.39□□□□□ -1.07
TFRC-215ENST00000491658 WNT7AO00755 349 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms