RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-223ENST00000491295 IFT172Q9UG01 1749 aa26.58■■□□□ 1.85
GGA1-223ENST00000491295 CDK12Q9NYV4 1490 aaPredicted RBP26.56■■□□□ 1.84
GGA1-223ENST00000491295 CDC42BPGQ6DT37 1551 aa26.56■■□□□ 1.84
GGA1-223ENST00000491295 PIK3C2GO75747 1445 aa26.56■■□□□ 1.84
GGA1-223ENST00000491295 SIRT1Q96EB6 747 aa26.55■■□□□ 1.84
GGA1-223ENST00000491295 STK26Q9P289 416 aa26.55■■□□□ 1.84
GGA1-223ENST00000491295 ESCO1Q5FWF5 840 aa26.54■■□□□ 1.84
GGA1-223ENST00000491295 C8orf37Q96NL8 207 aa26.54■■□□□ 1.84
GGA1-223ENST00000491295 NPHP3Q7Z494 1330 aa26.54■■□□□ 1.84
GGA1-223ENST00000491295 WAPLQ7Z5K2 1190 aa26.52■■□□□ 1.84
GGA1-223ENST00000491295 C14orf93Q9H972 538 aaKnown RBP26.52■■□□□ 1.84
GGA1-223ENST00000491295 TMEM132EQ6IEE7 984 aa26.51■■□□□ 1.83
GGA1-223ENST00000491295 NGLY1Q96IV0 654 aa26.51■■□□□ 1.83
GGA1-223ENST00000491295 QTRT2Q9H974 415 aaKnown RBP26.5■■□□□ 1.83
GGA1-223ENST00000491295 KNDC1Q76NI1 1749 aa26.5■■□□□ 1.83
GGA1-223ENST00000491295 YTHDC2Q9H6S0 1430 aaKnown RBP26.49■■□□□ 1.83
GGA1-223ENST00000491295 RBM6P78332 1123 aaKnown RBP26.49■■□□□ 1.83
GGA1-223ENST00000491295 ADAMTS2O95450 1211 aa26.48■■□□□ 1.83
GGA1-223ENST00000491295 UPF1Q92900 1129 aaKnown RBP eCLIP26.47■■□□□ 1.83
GGA1-223ENST00000491295 RAB3GAP2Q9H2M9 1393 aa26.46■■□□□ 1.83
GGA1-223ENST00000491295 NRXN1Q9ULB1 1477 aa26.46■■□□□ 1.83
GGA1-223ENST00000491295 DHX57Q6P158 1386 aaKnown RBP26.46■■□□□ 1.83
GGA1-223ENST00000491295 MYOM2P54296 1465 aa26.45■■□□□ 1.82
GGA1-223ENST00000491295 FOXO3O43524 673 aa26.45■■□□□ 1.82
GGA1-223ENST00000491295 COL22A1Q8NFW1 1626 aaPredicted RBP26.44■■□□□ 1.82
GGA1-223ENST00000491295 FNBP4Q8N3X1 1017 aaPredicted RBP26.43■■□□□ 1.82
GGA1-223ENST00000491295 HRCP23327 699 aa26.42■■□□□ 1.82
GGA1-223ENST00000491295 PLEKHH1Q9ULM0 1364 aa26.42■■□□□ 1.82
GGA1-223ENST00000491295 PXDNQ92626 1479 aa26.42■■□□□ 1.82
GGA1-223ENST00000491295 CFAP70Q5T0N1 1121 aa26.41■■□□□ 1.82
GGA1-223ENST00000491295 USP21Q9UK80 565 aa26.41■■□□□ 1.82
GGA1-223ENST00000491295 STAC3Q96MF2 364 aa26.4■■□□□ 1.82
GGA1-223ENST00000491295 NUTM2FA1L443 756 aa26.39■■□□□ 1.82
GGA1-223ENST00000491295 TRPC5Q9UL62 973 aaPredicted RBP26.39■■□□□ 1.82
GGA1-223ENST00000491295 FMN2Q9NZ56 1722 aa26.37■■□□□ 1.81
GGA1-223ENST00000491295 KIF1AQ12756 1690 aa26.34■■□□□ 1.81
GGA1-223ENST00000491295 RGS12O14924 1447 aa26.34■■□□□ 1.81
GGA1-223ENST00000491295 XPCQ01831 940 aaPredicted RBP26.34■■□□□ 1.81
GGA1-223ENST00000491295 PRAM1Q96QH2 718 aa26.33■■□□□ 1.81
GGA1-223ENST00000491295 SPATA31A3Q5VYP0 1347 aa26.33■■□□□ 1.81
GGA1-223ENST00000491295 PSME1Q06323 249 aa26.32■■□□□ 1.8
GGA1-223ENST00000491295 KRT28Q7Z3Y7 464 aa26.32■■□□□ 1.8
GGA1-223ENST00000491295 DLC1Q96QB1 1528 aa26.32■■□□□ 1.8
GGA1-223ENST00000491295 POGKQ9P215 609 aa26.31■■□□□ 1.8
GGA1-223ENST00000491295 PHF8Q9UPP1 1060 aa26.31■■□□□ 1.8
GGA1-223ENST00000491295 ATRNO75882 1429 aa26.3■■□□□ 1.8
GGA1-223ENST00000491295 MARF1Q9Y4F3 1742 aaKnown RBP26.28■■□□□ 1.8
GGA1-223ENST00000491295 DCAF11Q8TEB1 546 aa26.27■■□□□ 1.8
GGA1-223ENST00000491295 BCL9LQ86UU0 1499 aa26.26■■□□□ 1.79
GGA1-223ENST00000491295 ANKARQ7Z5J8 1434 aa26.25■■□□□ 1.79
GGA1-223ENST00000491295 SAFB2Q14151 953 aaKnown RBP eCLIP26.25■■□□□ 1.79
GGA1-223ENST00000491295 ADGRB1O14514 1584 aa26.24■■□□□ 1.79
GGA1-223ENST00000491295 SBNO1A3KN83 1393 aa26.24■■□□□ 1.79
GGA1-223ENST00000491295 ATAD2Q6PL18 1390 aa26.24■■□□□ 1.79
GGA1-223ENST00000491295 KDM2AQ9Y2K7 1162 aa26.24■■□□□ 1.79
GGA1-223ENST00000491295 RGPD8O14715 1765 aaPredicted RBP26.23■■□□□ 1.79
GGA1-223ENST00000491295 EIF3AQ14152 1382 aaKnown RBP26.22■■□□□ 1.79
GGA1-223ENST00000491295 GJD4Q96KN9 370 aaPredicted RBP26.22■■□□□ 1.79
GGA1-223ENST00000491295 TRAK1Q9UPV9 953 aa26.22■■□□□ 1.79
GGA1-223ENST00000491295 TNS3Q68CZ2 1445 aa26.22■■□□□ 1.79
GGA1-223ENST00000491295 UNC5CLQ8IV45 518 aa26.21■■□□□ 1.79
GGA1-223ENST00000491295 ADGRB2O60241 1585 aa26.2■■□□□ 1.79
GGA1-223ENST00000491295 ARHGEF10O15013 1369 aa26.2■■□□□ 1.78
GGA1-223ENST00000491295 HAP1P54257 671 aaPredicted RBP26.18■■□□□ 1.78
GGA1-223ENST00000491295 SLIT2O94813 1529 aa26.18■■□□□ 1.78
GGA1-223ENST00000491295 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.17■■□□□ 1.78
GGA1-223ENST00000491295 CCDC125Q86Z20 511 aa26.15■■□□□ 1.78
GGA1-223ENST00000491295 USP32Q8NFA0 1604 aa26.14■■□□□ 1.78
GGA1-223ENST00000491295 WASLO00401 505 aaPredicted RBP26.14■■□□□ 1.78
GGA1-223ENST00000491295 PMFBP1Q8TBY8 1022 aa26.14■■□□□ 1.78
GGA1-223ENST00000491295 LMOD2Q6P5Q4 547 aa26.13■■□□□ 1.77
GGA1-223ENST00000491295 HIRIP3Q9BW71 556 aaPredicted RBP26.13■■□□□ 1.77
GGA1-223ENST00000491295 MINK1Q8N4C8 1332 aaPredicted RBP26.13■■□□□ 1.77
GGA1-223ENST00000491295 GPRASP1Q5JY77 1395 aa26.12■■□□□ 1.77
GGA1-223ENST00000491295 CABLES1Q8TDN4 633 aa26.11■■□□□ 1.77
GGA1-223ENST00000491295 TULP4Q9NRJ4 1543 aa26.1■■□□□ 1.77
GGA1-223ENST00000491295 VPS72Q15906 364 aa26.09■■□□□ 1.77
GGA1-223ENST00000491295 RALGAPBQ86X10 1494 aa26.08■■□□□ 1.77
GGA1-223ENST00000491295 PRR36Q9H6K5 1346 aa26.08■■□□□ 1.77
GGA1-223ENST00000491295 NWD2Q9ULI1 1742 aa26.05■■□□□ 1.76
GGA1-223ENST00000491295 NGDNQ8NEJ9 315 aaKnown RBP26.05■■□□□ 1.76
GGA1-223ENST00000491295 GLI3P10071 1580 aa26.04■■□□□ 1.76
GGA1-223ENST00000491295 ONECUT3O60422 494 aaPredicted RBP26.04■■□□□ 1.76
GGA1-223ENST00000491295 FAM83GA6ND36 823 aa26.03■■□□□ 1.76
GGA1-223ENST00000491295 TRPM3Q9HCF6 1732 aaPredicted RBP26.02■■□□□ 1.76
GGA1-223ENST00000491295 EP400Q96L91 3159 aa26.02■■□□□ 1.76
GGA1-223ENST00000491295 ABCA3Q99758 1704 aa26.02■■□□□ 1.76
GGA1-223ENST00000491295 ARHGEF28Q8N1W1 1705 aaKnown RBP26.01■■□□□ 1.75
GGA1-223ENST00000491295 NUDT16Q96DE0 195 aaKnown RBP26.01■■□□□ 1.75
GGA1-223ENST00000491295 KIAA1210Q9ULL0 1709 aa26.01■■□□□ 1.75
GGA1-223ENST00000491295 PLEKHG5O94827 1062 aa26■■□□□ 1.75
GGA1-223ENST00000491295 ALS2Q96Q42 1657 aa25.99■■□□□ 1.75
GGA1-223ENST00000491295 SEPT12Q8IYM1 358 aa25.99■■□□□ 1.75
GGA1-223ENST00000491295 CCDC9Q9Y3X0 531 aaKnown RBP25.99■■□□□ 1.75
GGA1-223ENST00000491295 PLCH1Q4KWH8 1693 aa25.99■■□□□ 1.75
GGA1-223ENST00000491295 ITSN1Q15811 1721 aa25.97■■□□□ 1.75
GGA1-223ENST00000491295 PAK3O75914 559 aaPredicted RBP25.97■■□□□ 1.75
GGA1-223ENST00000491295 CDK19Q9BWU1 502 aa25.97■■□□□ 1.75
GGA1-223ENST00000491295 CCDC61Q9Y6R9 512 aa25.96■■□□□ 1.75
GGA1-223ENST00000491295 ATP7BP35670 1465 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms