RNA–Protein interactions for RNA: ENST00000491166.1

TMCO3-208, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-208ENST00000491166 PTCH1Q13635 1447 aa18.43■□□□□ 0.54
TMCO3-208ENST00000491166 PNPLA6Q8IY17 1366 aa18.42■□□□□ 0.54
TMCO3-208ENST00000491166 ANKRD30BQ9BXX2 1392 aa18.42■□□□□ 0.54
TMCO3-208ENST00000491166 TMEM132EQ6IEE7 984 aa18.42■□□□□ 0.54
TMCO3-208ENST00000491166 LRRC59Q96AG4 307 aaKnown RBP18.42■□□□□ 0.54
TMCO3-208ENST00000491166 USP21Q9UK80 565 aa18.41■□□□□ 0.54
TMCO3-208ENST00000491166 NHSL1Q5SYE7 1610 aa18.41■□□□□ 0.54
TMCO3-208ENST00000491166 ACIN1Q9UKV3 1341 aaKnown RBP18.4■□□□□ 0.54
TMCO3-208ENST00000491166 IFT172Q9UG01 1749 aa18.4■□□□□ 0.54
TMCO3-208ENST00000491166 WAPLQ7Z5K2 1190 aa18.38■□□□□ 0.53
TMCO3-208ENST00000491166 PIK3C2GO75747 1445 aa18.38■□□□□ 0.53
TMCO3-208ENST00000491166 ORAI2Q96SN7 254 aa18.37■□□□□ 0.53
TMCO3-208ENST00000491166 TRPC5Q9UL62 973 aaPredicted RBP18.37■□□□□ 0.53
TMCO3-208ENST00000491166 PRAG1Q86YV5 1406 aa18.37■□□□□ 0.53
TMCO3-208ENST00000491166 C1orf167Q5SNV9 1468 aa18.37■□□□□ 0.53
TMCO3-208ENST00000491166 CCDC125Q86Z20 511 aa18.36■□□□□ 0.53
TMCO3-208ENST00000491166 PLEKHH1Q9ULM0 1364 aa18.36■□□□□ 0.53
TMCO3-208ENST00000491166 LRPPRCP42704 1394 aaKnown RBP18.35■□□□□ 0.53
TMCO3-208ENST00000491166 CFAP70Q5T0N1 1121 aa18.35■□□□□ 0.53
TMCO3-208ENST00000491166 NUTM2FA1L443 756 aa18.34■□□□□ 0.53
TMCO3-208ENST00000491166 LRP5O75197 1615 aa18.34■□□□□ 0.53
TMCO3-208ENST00000491166 DEFB132Q7Z7B7 95 aa18.33■□□□□ 0.52
TMCO3-208ENST00000491166 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
TMCO3-208ENST00000491166 KDM2AQ9Y2K7 1162 aa18.32■□□□□ 0.52
TMCO3-208ENST00000491166 TECPR2O15040 1411 aa18.32■□□□□ 0.52
TMCO3-208ENST00000491166 ATRNO75882 1429 aa18.32■□□□□ 0.52
TMCO3-208ENST00000491166 YTHDC2Q9H6S0 1430 aaKnown RBP18.32■□□□□ 0.52
TMCO3-208ENST00000491166 MYOM2P54296 1465 aa18.31■□□□□ 0.52
TMCO3-208ENST00000491166 NRXN1Q9ULB1 1477 aa18.31■□□□□ 0.52
TMCO3-208ENST00000491166 ABCC11Q96J66 1382 aa18.3■□□□□ 0.52
TMCO3-208ENST00000491166 PSDA5PKW4 1024 aaPredicted RBP18.29■□□□□ 0.52
TMCO3-208ENST00000491166 ESCO1Q5FWF5 840 aa18.29■□□□□ 0.52
TMCO3-208ENST00000491166 HRCP23327 699 aa18.28■□□□□ 0.52
TMCO3-208ENST00000491166 SAFB2Q14151 953 aaKnown RBP eCLIP18.28■□□□□ 0.52
TMCO3-208ENST00000491166 FNBP4Q8N3X1 1017 aaPredicted RBP18.28■□□□□ 0.52
TMCO3-208ENST00000491166 DCAF11Q8TEB1 546 aa18.28■□□□□ 0.52
TMCO3-208ENST00000491166 CDC42BPGQ6DT37 1551 aa18.28■□□□□ 0.52
TMCO3-208ENST00000491166 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.52
TMCO3-208ENST00000491166 XPCQ01831 940 aaPredicted RBP18.27■□□□□ 0.52
TMCO3-208ENST00000491166 KNDC1Q76NI1 1749 aa18.26■□□□□ 0.51
TMCO3-208ENST00000491166 DHX57Q6P158 1386 aaKnown RBP18.26■□□□□ 0.51
TMCO3-208ENST00000491166 SOS2Q07890 1332 aaPredicted RBP18.24■□□□□ 0.51
TMCO3-208ENST00000491166 FOXO3O43524 673 aa18.24■□□□□ 0.51
TMCO3-208ENST00000491166 PRAM1Q96QH2 718 aa18.24■□□□□ 0.51
TMCO3-208ENST00000491166 LAMC1P11047 1609 aa18.23■□□□□ 0.51
TMCO3-208ENST00000491166 SF3B2Q13435 895 aaKnown RBP18.22■□□□□ 0.51
TMCO3-208ENST00000491166 GJD4Q96KN9 370 aaPredicted RBP18.21■□□□□ 0.51
TMCO3-208ENST00000491166 TRAK1Q9UPV9 953 aa18.21■□□□□ 0.51
TMCO3-208ENST00000491166 ADGRB1O14514 1584 aa18.21■□□□□ 0.51
TMCO3-208ENST00000491166 POGKQ9P215 609 aa18.2■□□□□ 0.5
TMCO3-208ENST00000491166 NPHP3Q7Z494 1330 aa18.2■□□□□ 0.5
TMCO3-208ENST00000491166 BCL9LQ86UU0 1499 aa18.2■□□□□ 0.5
TMCO3-208ENST00000491166 SIRT1Q96EB6 747 aa18.19■□□□□ 0.5
TMCO3-208ENST00000491166 FMN2Q9NZ56 1722 aa18.18■□□□□ 0.5
TMCO3-208ENST00000491166 YY1P25490 414 aa18.18■□□□□ 0.5
TMCO3-208ENST00000491166 HIRIP3Q9BW71 556 aaPredicted RBP18.18■□□□□ 0.5
TMCO3-208ENST00000491166 PXDNQ92626 1479 aa18.17■□□□□ 0.5
TMCO3-208ENST00000491166 MINK1Q8N4C8 1332 aaPredicted RBP18.16■□□□□ 0.5
TMCO3-208ENST00000491166 BRWD3Q6RI45 1802 aa18.16■□□□□ 0.5
TMCO3-208ENST00000491166 DLC1Q96QB1 1528 aa18.15■□□□□ 0.5
TMCO3-208ENST00000491166 PLEKHG5O94827 1062 aa18.14■□□□□ 0.49
TMCO3-208ENST00000491166 RALGAPBQ86X10 1494 aa18.14■□□□□ 0.49
TMCO3-208ENST00000491166 GLI3P10071 1580 aa18.13■□□□□ 0.49
TMCO3-208ENST00000491166 PHF8Q9UPP1 1060 aa18.13■□□□□ 0.49
TMCO3-208ENST00000491166 COL22A1Q8NFW1 1626 aaPredicted RBP18.12■□□□□ 0.49
TMCO3-208ENST00000491166 KRT28Q7Z3Y7 464 aa18.11■□□□□ 0.49
TMCO3-208ENST00000491166 PMFBP1Q8TBY8 1022 aa18.11■□□□□ 0.49
TMCO3-208ENST00000491166 MARF1Q9Y4F3 1742 aaKnown RBP18.11■□□□□ 0.49
TMCO3-208ENST00000491166 RGPD8O14715 1765 aaPredicted RBP18.11■□□□□ 0.49
TMCO3-208ENST00000491166 STAC3Q96MF2 364 aa18.1■□□□□ 0.49
TMCO3-208ENST00000491166 SPATA31A3Q5VYP0 1347 aa18.09■□□□□ 0.49
TMCO3-208ENST00000491166 R3HDM1Q15032 1099 aaKnown RBP18.09■□□□□ 0.49
TMCO3-208ENST00000491166 SEPT12Q8IYM1 358 aa18.09■□□□□ 0.49
TMCO3-208ENST00000491166 SIN3AQ96ST3 1273 aa18.09■□□□□ 0.49
TMCO3-208ENST00000491166 KIF1AQ12756 1690 aa18.09■□□□□ 0.49
TMCO3-208ENST00000491166 PRR36Q9H6K5 1346 aa18.08■□□□□ 0.49
TMCO3-208ENST00000491166 USP32Q8NFA0 1604 aa18.08■□□□□ 0.48
TMCO3-208ENST00000491166 ADGRB2O60241 1585 aa18.08■□□□□ 0.48
TMCO3-208ENST00000491166 BAG6P46379 1132 aa18.07■□□□□ 0.48
TMCO3-208ENST00000491166 NBPF1Q3BBV0 1214 aa18.07■□□□□ 0.48
TMCO3-208ENST00000491166 LMOD2Q6P5Q4 547 aa18.07■□□□□ 0.48
TMCO3-208ENST00000491166 UNC5CLQ8IV45 518 aa18.07■□□□□ 0.48
TMCO3-208ENST00000491166 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.06■□□□□ 0.48
TMCO3-208ENST00000491166 WASLO00401 505 aaPredicted RBP18.06■□□□□ 0.48
TMCO3-208ENST00000491166 CABLES1Q8TDN4 633 aa18.06■□□□□ 0.48
TMCO3-208ENST00000491166 ANKARQ7Z5J8 1434 aa18.06■□□□□ 0.48
TMCO3-208ENST00000491166 PSME1Q06323 249 aa18.05■□□□□ 0.48
TMCO3-208ENST00000491166 NEUROD1Q13562 356 aa18.05■□□□□ 0.48
TMCO3-208ENST00000491166 ARHGEF28Q8N1W1 1705 aaKnown RBP18.04■□□□□ 0.48
TMCO3-208ENST00000491166 L3MBTL2Q969R5 705 aa18.04■□□□□ 0.48
TMCO3-208ENST00000491166 TNS3Q68CZ2 1445 aa18.04■□□□□ 0.48
TMCO3-208ENST00000491166 EN1Q05925 392 aaPredicted RBP18.03■□□□□ 0.48
TMCO3-208ENST00000491166 KRT27Q7Z3Y8 459 aa18.03■□□□□ 0.48
TMCO3-208ENST00000491166 TULP4Q9NRJ4 1543 aa18.03■□□□□ 0.48
TMCO3-208ENST00000491166 HAP1P54257 671 aaPredicted RBP18.02■□□□□ 0.48
TMCO3-208ENST00000491166 CCDC9Q9Y3X0 531 aaKnown RBP18.02■□□□□ 0.48
TMCO3-208ENST00000491166 SLIT2O94813 1529 aa18.02■□□□□ 0.47
TMCO3-208ENST00000491166 A0A0G2JS52 829 aa18.01■□□□□ 0.47
TMCO3-208ENST00000491166 MYT1Q01538 1121 aa18.01■□□□□ 0.47
TMCO3-208ENST00000491166 SBNO1A3KN83 1393 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms