RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 LRP6O75581 1613 aa19.89■□□□□ 0.77
TRAIP-211ENST00000491060 SHPRHQ149N8 1683 aa19.88■□□□□ 0.77
TRAIP-211ENST00000491060 MYOM2P54296 1465 aa19.88■□□□□ 0.77
TRAIP-211ENST00000491060 XPCQ01831 940 aaPredicted RBP19.88■□□□□ 0.77
TRAIP-211ENST00000491060 RGPD8O14715 1765 aaPredicted RBP19.88■□□□□ 0.77
TRAIP-211ENST00000491060 ESCO1Q5FWF5 840 aa19.87■□□□□ 0.77
TRAIP-211ENST00000491060 C14orf93Q9H972 538 aaKnown RBP19.87■□□□□ 0.77
TRAIP-211ENST00000491060 LAMC1P11047 1609 aa19.87■□□□□ 0.77
TRAIP-211ENST00000491060 PLEKHG5O94827 1062 aa19.86■□□□□ 0.77
TRAIP-211ENST00000491060 POTEAQ6S8J7 498 aa19.86■□□□□ 0.77
TRAIP-211ENST00000491060 TRAK1Q9UPV9 953 aa19.85■□□□□ 0.77
TRAIP-211ENST00000491060 DHX57Q6P158 1386 aaKnown RBP19.84■□□□□ 0.77
TRAIP-211ENST00000491060 NRXN1Q9ULB1 1477 aa19.84■□□□□ 0.77
TRAIP-211ENST00000491060 CDC42BPGQ6DT37 1551 aa19.83■□□□□ 0.77
TRAIP-211ENST00000491060 HRCP23327 699 aa19.83■□□□□ 0.77
TRAIP-211ENST00000491060 PRAM1Q96QH2 718 aa19.83■□□□□ 0.77
TRAIP-211ENST00000491060 POGKQ9P215 609 aa19.83■□□□□ 0.77
TRAIP-211ENST00000491060 ABCC11Q96J66 1382 aa19.83■□□□□ 0.76
TRAIP-211ENST00000491060 FMN2Q9NZ56 1722 aa19.82■□□□□ 0.76
TRAIP-211ENST00000491060 HIRIP3Q9BW71 556 aaPredicted RBP19.81■□□□□ 0.76
TRAIP-211ENST00000491060 TECPR2O15040 1411 aa19.81■□□□□ 0.76
TRAIP-211ENST00000491060 PRAG1Q86YV5 1406 aa19.8■□□□□ 0.76
TRAIP-211ENST00000491060 LRRC59Q96AG4 307 aaKnown RBP19.8■□□□□ 0.76
TRAIP-211ENST00000491060 SPATA31A6Q5VVP1 1343 aa19.79■□□□□ 0.76
TRAIP-211ENST00000491060 ADAMTS2O95450 1211 aa19.79■□□□□ 0.76
TRAIP-211ENST00000491060 NEUROD1Q13562 356 aa19.79■□□□□ 0.76
TRAIP-211ENST00000491060 MINK1Q8N4C8 1332 aaPredicted RBP19.78■□□□□ 0.76
TRAIP-211ENST00000491060 FOXO3O43524 673 aa19.78■□□□□ 0.76
TRAIP-211ENST00000491060 SIN3AQ96ST3 1273 aa19.78■□□□□ 0.76
TRAIP-211ENST00000491060 PNPLA6Q8IY17 1366 aa19.78■□□□□ 0.76
TRAIP-211ENST00000491060 C8orf37Q96NL8 207 aa19.77■□□□□ 0.76
TRAIP-211ENST00000491060 ADGRB1O14514 1584 aa19.76■□□□□ 0.75
TRAIP-211ENST00000491060 AFF2P51816 1311 aa19.73■□□□□ 0.75
TRAIP-211ENST00000491060 ARHGEF28Q8N1W1 1705 aaKnown RBP19.72■□□□□ 0.75
TRAIP-211ENST00000491060 PMFBP1Q8TBY8 1022 aa19.72■□□□□ 0.75
TRAIP-211ENST00000491060 SOS2Q07890 1332 aaPredicted RBP19.72■□□□□ 0.75
TRAIP-211ENST00000491060 NPHP3Q7Z494 1330 aa19.71■□□□□ 0.75
TRAIP-211ENST00000491060 LMOD2Q6P5Q4 547 aa19.7■□□□□ 0.74
TRAIP-211ENST00000491060 DLC1Q96QB1 1528 aa19.7■□□□□ 0.74
TRAIP-211ENST00000491060 KIF1AQ12756 1690 aa19.69■□□□□ 0.74
TRAIP-211ENST00000491060 PXDNQ92626 1479 aa19.69■□□□□ 0.74
TRAIP-211ENST00000491060 NBPF1Q3BBV0 1214 aa19.69■□□□□ 0.74
TRAIP-211ENST00000491060 NGLY1Q96IV0 654 aa19.69■□□□□ 0.74
TRAIP-211ENST00000491060 PHF8Q9UPP1 1060 aa19.69■□□□□ 0.74
TRAIP-211ENST00000491060 USP32Q8NFA0 1604 aa19.69■□□□□ 0.74
TRAIP-211ENST00000491060 KRT28Q7Z3Y7 464 aa19.68■□□□□ 0.74
TRAIP-211ENST00000491060 SIRT1Q96EB6 747 aa19.68■□□□□ 0.74
TRAIP-211ENST00000491060 ZNF772Q68DY9 489 aaPredicted RBP19.67■□□□□ 0.74
TRAIP-211ENST00000491060 L3MBTL2Q969R5 705 aa19.65■□□□□ 0.74
TRAIP-211ENST00000491060 PSME1Q06323 249 aa19.64■□□□□ 0.73
TRAIP-211ENST00000491060 COL22A1Q8NFW1 1626 aaPredicted RBP19.63■□□□□ 0.73
TRAIP-211ENST00000491060 HAP1P54257 671 aaPredicted RBP19.63■□□□□ 0.73
TRAIP-211ENST00000491060 CABLES1Q8TDN4 633 aa19.63■□□□□ 0.73
TRAIP-211ENST00000491060 KIAA1210Q9ULL0 1709 aa19.62■□□□□ 0.73
TRAIP-211ENST00000491060 MARF1Q9Y4F3 1742 aaKnown RBP19.62■□□□□ 0.73
TRAIP-211ENST00000491060 ADGRB2O60241 1585 aa19.62■□□□□ 0.73
TRAIP-211ENST00000491060 PRR36Q9H6K5 1346 aa19.62■□□□□ 0.73
TRAIP-211ENST00000491060 RXRBP28702 533 aa19.62■□□□□ 0.73
TRAIP-211ENST00000491060 WASLO00401 505 aaPredicted RBP19.61■□□□□ 0.73
TRAIP-211ENST00000491060 QTRT2Q9H974 415 aaKnown RBP19.61■□□□□ 0.73
TRAIP-211ENST00000491060 TRIM26Q12899 539 aaPredicted RBP19.6■□□□□ 0.73
TRAIP-211ENST00000491060 USP21Q9UK80 565 aa19.6■□□□□ 0.73
TRAIP-211ENST00000491060 SPATA31A3Q5VYP0 1347 aa19.59■□□□□ 0.73
TRAIP-211ENST00000491060 STAC3Q96MF2 364 aa19.59■□□□□ 0.73
TRAIP-211ENST00000491060 TULP4Q9NRJ4 1543 aa19.58■□□□□ 0.73
TRAIP-211ENST00000491060 PAK3O75914 559 aaPredicted RBP19.58■□□□□ 0.72
TRAIP-211ENST00000491060 QRICH2Q9H0J4 1663 aa19.57■□□□□ 0.72
TRAIP-211ENST00000491060 NGDNQ8NEJ9 315 aaKnown RBP19.57■□□□□ 0.72
TRAIP-211ENST00000491060 CDK19Q9BWU1 502 aa19.57■□□□□ 0.72
TRAIP-211ENST00000491060 ITSN1Q15811 1721 aa19.56■□□□□ 0.72
TRAIP-211ENST00000491060 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
TRAIP-211ENST00000491060 ANKARQ7Z5J8 1434 aa19.56■□□□□ 0.72
TRAIP-211ENST00000491060 TRPM1Q7Z4N2 1603 aa19.55■□□□□ 0.72
TRAIP-211ENST00000491060 NUDT16Q96DE0 195 aaKnown RBP19.55■□□□□ 0.72
TRAIP-211ENST00000491060 ABCA3Q99758 1704 aa19.54■□□□□ 0.72
TRAIP-211ENST00000491060 TRPM3Q9HCF6 1732 aaPredicted RBP19.54■□□□□ 0.72
TRAIP-211ENST00000491060 SRPK2P78362 688 aaKnown RBP19.53■□□□□ 0.72
TRAIP-211ENST00000491060 NUTM2GQ5VZR2 741 aa19.53■□□□□ 0.72
TRAIP-211ENST00000491060 CABP2Q9NPB3 220 aa19.52■□□□□ 0.72
TRAIP-211ENST00000491060 EIF3AQ14152 1382 aaKnown RBP19.52■□□□□ 0.72
TRAIP-211ENST00000491060 GPRASP1Q5JY77 1395 aa19.52■□□□□ 0.72
TRAIP-211ENST00000491060 CENPJQ9HC77 1338 aaPredicted RBP19.51■□□□□ 0.71
TRAIP-211ENST00000491060 RGS12O14924 1447 aa19.51■□□□□ 0.71
TRAIP-211ENST00000491060 ATP7BP35670 1465 aa19.51■□□□□ 0.71
TRAIP-211ENST00000491060 ROCK2O75116 1388 aaKnown RBP19.5■□□□□ 0.71
TRAIP-211ENST00000491060 RBM6P78332 1123 aaKnown RBP19.5■□□□□ 0.71
TRAIP-211ENST00000491060 NBPF8Q3BBV2 869 aa19.5■□□□□ 0.71
TRAIP-211ENST00000491060 PLCH1Q4KWH8 1693 aa19.49■□□□□ 0.71
TRAIP-211ENST00000491060 TRPC5Q9UL62 973 aaPredicted RBP19.49■□□□□ 0.71
TRAIP-211ENST00000491060 SBNO1A3KN83 1393 aa19.48■□□□□ 0.71
TRAIP-211ENST00000491060 TONSLQ96HA7 1378 aa19.48■□□□□ 0.71
TRAIP-211ENST00000491060 CCDC9Q9Y3X0 531 aaKnown RBP19.48■□□□□ 0.71
TRAIP-211ENST00000491060 TOPAZ1Q8N9V7 1692 aa19.48■□□□□ 0.71
TRAIP-211ENST00000491060 ALS2Q96Q42 1657 aa19.48■□□□□ 0.71
TRAIP-211ENST00000491060 FNBP4Q8N3X1 1017 aaPredicted RBP19.46■□□□□ 0.71
TRAIP-211ENST00000491060 ARHGEF10O15013 1369 aa19.45■□□□□ 0.7
TRAIP-211ENST00000491060 BCL9LQ86UU0 1499 aa19.45■□□□□ 0.7
TRAIP-211ENST00000491060 ACEP12821 1306 aa19.45■□□□□ 0.7
TRAIP-211ENST00000491060 ATRNO75882 1429 aa19.44■□□□□ 0.7
TRAIP-211ENST00000491060 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms