RNA–Protein interactions for RNA: ENST00000490980.1

FRAT1-202, Transcript of FRAT1, WNT signaling pathway regulator, humanhuman

TSL 2

Gene FRAT1, Length 633 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAT1-202ENST00000490980 TONSLQ96HA7 1378 aa20.28■□□□□ 0.84
FRAT1-202ENST00000490980 PLEKHH1Q9ULM0 1364 aa20.28■□□□□ 0.84
FRAT1-202ENST00000490980 PHLPP1O60346 1717 aa20.27■□□□□ 0.84
FRAT1-202ENST00000490980 FMN2Q9NZ56 1722 aa20.27■□□□□ 0.84
FRAT1-202ENST00000490980 ADGRB2O60241 1585 aa20.25■□□□□ 0.83
FRAT1-202ENST00000490980 PRAM1Q96QH2 718 aa20.24■□□□□ 0.83
FRAT1-202ENST00000490980 TRAK1Q9UPV9 953 aa20.24■□□□□ 0.83
FRAT1-202ENST00000490980 CLSPNQ9HAW4 1339 aa20.24■□□□□ 0.83
FRAT1-202ENST00000490980 NHSL1Q5SYE7 1610 aa20.24■□□□□ 0.83
FRAT1-202ENST00000490980 AHDC1Q5TGY3 1603 aaPredicted RBP20.24■□□□□ 0.83
FRAT1-202ENST00000490980 C1orf167Q5SNV9 1468 aa20.23■□□□□ 0.83
FRAT1-202ENST00000490980 POGKQ9P215 609 aa20.22■□□□□ 0.83
FRAT1-202ENST00000490980 COL16A1Q07092 1604 aaPredicted RBP20.21■□□□□ 0.83
FRAT1-202ENST00000490980 NBPF1Q3BBV0 1214 aa20.21■□□□□ 0.83
FRAT1-202ENST00000490980 BRINP3Q76B58 766 aa20.2■□□□□ 0.82
FRAT1-202ENST00000490980 RGPD8O14715 1765 aaPredicted RBP20.2■□□□□ 0.82
FRAT1-202ENST00000490980 SAFB2Q14151 953 aaKnown RBP eCLIP20.18■□□□□ 0.82
FRAT1-202ENST00000490980 KIF1AQ12756 1690 aa20.16■□□□□ 0.82
FRAT1-202ENST00000490980 QRICH2Q9H0J4 1663 aa20.16■□□□□ 0.82
FRAT1-202ENST00000490980 NBPF8Q3BBV2 869 aa20.16■□□□□ 0.82
FRAT1-202ENST00000490980 ROCK2O75116 1388 aaKnown RBP20.15■□□□□ 0.82
FRAT1-202ENST00000490980 RALGAPBQ86X10 1494 aa20.15■□□□□ 0.82
FRAT1-202ENST00000490980 USP32Q8NFA0 1604 aa20.15■□□□□ 0.82
FRAT1-202ENST00000490980 CCER1Q8TC90 406 aaPredicted RBP20.14■□□□□ 0.81
FRAT1-202ENST00000490980 MINK1Q8N4C8 1332 aaPredicted RBP20.13■□□□□ 0.81
FRAT1-202ENST00000490980 SHPRHQ149N8 1683 aa20.13■□□□□ 0.81
FRAT1-202ENST00000490980 GPRASP1Q5JY77 1395 aa20.12■□□□□ 0.81
FRAT1-202ENST00000490980 ORAI2Q96SN7 254 aa20.12■□□□□ 0.81
FRAT1-202ENST00000490980 ANKARQ7Z5J8 1434 aa20.11■□□□□ 0.81
FRAT1-202ENST00000490980 EIF3AQ14152 1382 aaKnown RBP20.11■□□□□ 0.81
FRAT1-202ENST00000490980 ITSN1Q15811 1721 aa20.11■□□□□ 0.81
FRAT1-202ENST00000490980 NUTM2FA1L443 756 aa20.11■□□□□ 0.81
FRAT1-202ENST00000490980 TIMELESSQ9UNS1 1208 aa20.11■□□□□ 0.81
FRAT1-202ENST00000490980 TULP4Q9NRJ4 1543 aa20.11■□□□□ 0.81
FRAT1-202ENST00000490980 MED1Q15648 1581 aaPredicted RBP20.1■□□□□ 0.81
FRAT1-202ENST00000490980 ESCO1Q5FWF5 840 aa20.1■□□□□ 0.81
FRAT1-202ENST00000490980 HIRIP3Q9BW71 556 aaPredicted RBP20.1■□□□□ 0.81
FRAT1-202ENST00000490980 CENPJQ9HC77 1338 aaPredicted RBP20.09■□□□□ 0.81
FRAT1-202ENST00000490980 JCADQ9P266 1359 aa20.08■□□□□ 0.8
FRAT1-202ENST00000490980 WASLO00401 505 aaPredicted RBP20.07■□□□□ 0.8
FRAT1-202ENST00000490980 TOPAZ1Q8N9V7 1692 aa20.06■□□□□ 0.8
FRAT1-202ENST00000490980 DDX17Q92841 729 aaKnown RBP20.05■□□□□ 0.8
FRAT1-202ENST00000490980 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
FRAT1-202ENST00000490980 PXDNQ92626 1479 aa20.05■□□□□ 0.8
FRAT1-202ENST00000490980 NPHP3Q7Z494 1330 aa20.04■□□□□ 0.8
FRAT1-202ENST00000490980 SOS2Q07890 1332 aaPredicted RBP20.03■□□□□ 0.8
FRAT1-202ENST00000490980 ATP7BP35670 1465 aa20.03■□□□□ 0.8
FRAT1-202ENST00000490980 LRRC59Q96AG4 307 aaKnown RBP20.02■□□□□ 0.8
FRAT1-202ENST00000490980 PHF8Q9UPP1 1060 aa20.02■□□□□ 0.8
FRAT1-202ENST00000490980 PRR36Q9H6K5 1346 aa20.02■□□□□ 0.79
FRAT1-202ENST00000490980 FOXO3O43524 673 aa20.01■□□□□ 0.79
FRAT1-202ENST00000490980 CDK19Q9BWU1 502 aa20■□□□□ 0.79
FRAT1-202ENST00000490980 COL22A1Q8NFW1 1626 aaPredicted RBP20■□□□□ 0.79
FRAT1-202ENST00000490980 SPATA31A6Q5VVP1 1343 aa19.99■□□□□ 0.79
FRAT1-202ENST00000490980 PNPLA6Q8IY17 1366 aa19.98■□□□□ 0.79
FRAT1-202ENST00000490980 NUDT16Q96DE0 195 aaKnown RBP19.98■□□□□ 0.79
FRAT1-202ENST00000490980 DISP3Q9P2K9 1392 aa19.97■□□□□ 0.79
FRAT1-202ENST00000490980 SBNO2Q9Y2G9 1366 aa19.97■□□□□ 0.79
FRAT1-202ENST00000490980 TRPM3Q9HCF6 1732 aaPredicted RBP19.96■□□□□ 0.79
FRAT1-202ENST00000490980 EVC2Q86UK5 1308 aa19.96■□□□□ 0.79
FRAT1-202ENST00000490980 SRPK2P78362 688 aaKnown RBP19.95■□□□□ 0.78
FRAT1-202ENST00000490980 XPCQ01831 940 aaPredicted RBP19.95■□□□□ 0.78
FRAT1-202ENST00000490980 PMFBP1Q8TBY8 1022 aa19.95■□□□□ 0.78
FRAT1-202ENST00000490980 LRP6O75581 1613 aa19.94■□□□□ 0.78
FRAT1-202ENST00000490980 KRT28Q7Z3Y7 464 aa19.94■□□□□ 0.78
FRAT1-202ENST00000490980 PSME1Q06323 249 aa19.93■□□□□ 0.78
FRAT1-202ENST00000490980 ALS2Q96Q42 1657 aa19.92■□□□□ 0.78
FRAT1-202ENST00000490980 CCDC61Q9Y6R9 512 aa19.92■□□□□ 0.78
FRAT1-202ENST00000490980 MARF1Q9Y4F3 1742 aaKnown RBP19.91■□□□□ 0.78
FRAT1-202ENST00000490980 CABP2Q9NPB3 220 aa19.91■□□□□ 0.78
FRAT1-202ENST00000490980 SPATA31A3Q5VYP0 1347 aa19.91■□□□□ 0.78
FRAT1-202ENST00000490980 SBNO1A3KN83 1393 aa19.91■□□□□ 0.78
FRAT1-202ENST00000490980 TNS3Q68CZ2 1445 aa19.91■□□□□ 0.78
FRAT1-202ENST00000490980 PPIP5K1Q6PFW1 1433 aa19.91■□□□□ 0.78
FRAT1-202ENST00000490980 NGDNQ8NEJ9 315 aaKnown RBP19.9■□□□□ 0.78
FRAT1-202ENST00000490980 PHF23Q9BUL5 403 aaPredicted RBP19.9■□□□□ 0.78
FRAT1-202ENST00000490980 USP47Q96K76 1375 aa19.9■□□□□ 0.78
FRAT1-202ENST00000490980 POLR3AO14802 1390 aaPredicted RBP19.89■□□□□ 0.77
FRAT1-202ENST00000490980 ABCA3Q99758 1704 aa19.89■□□□□ 0.77
FRAT1-202ENST00000490980 AKAP12Q02952 1782 aa19.88■□□□□ 0.77
FRAT1-202ENST00000490980 PLEKHG3A1L390 1219 aa19.88■□□□□ 0.77
FRAT1-202ENST00000490980 NUTM2BA6NNL0 878 aaPredicted RBP19.88■□□□□ 0.77
FRAT1-202ENST00000490980 NUTM2EB1AL46 878 aaPredicted RBP19.88■□□□□ 0.77
FRAT1-202ENST00000490980 NUTM2AQ8IVF1 878 aaPredicted RBP19.88■□□□□ 0.77
FRAT1-202ENST00000490980 ARHGEF10O15013 1369 aa19.86■□□□□ 0.77
FRAT1-202ENST00000490980 ATAD2Q6PL18 1390 aa19.86■□□□□ 0.77
FRAT1-202ENST00000490980 ACEP12821 1306 aa19.86■□□□□ 0.77
FRAT1-202ENST00000490980 ST20-MTHFSA0A0A6YYL1 179 aa19.86■□□□□ 0.77
FRAT1-202ENST00000490980 MEX3CQ5U5Q3 659 aaKnown RBP19.86■□□□□ 0.77
FRAT1-202ENST00000490980 CRYBG1Q9Y4K1 1723 aa19.85■□□□□ 0.77
FRAT1-202ENST00000490980 SLC24A1O60721 1099 aa19.84■□□□□ 0.77
FRAT1-202ENST00000490980 TESK2Q96S53 571 aa19.84■□□□□ 0.77
FRAT1-202ENST00000490980 CABP1Q9NZU7 370 aa19.82■□□□□ 0.76
FRAT1-202ENST00000490980 MON2Q7Z3U7 1717 aa19.82■□□□□ 0.76
FRAT1-202ENST00000490980 LMOD2Q6P5Q4 547 aa19.8■□□□□ 0.76
FRAT1-202ENST00000490980 PUS7Q96PZ0 661 aaKnown RBP19.8■□□□□ 0.76
FRAT1-202ENST00000490980 BRD4O60885 1362 aaPredicted RBP19.8■□□□□ 0.76
FRAT1-202ENST00000490980 NRKQ7Z2Y5 1582 aa19.79■□□□□ 0.76
FRAT1-202ENST00000490980 USP6P35125 1406 aa19.79■□□□□ 0.76
FRAT1-202ENST00000490980 PAK3O75914 559 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms