RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 LRPPRCP42704 1394 aaKnown RBP31.01■■■□□ 2.55
SYNE4-205ENST00000490730 WAPLQ7Z5K2 1190 aa31■■■□□ 2.55
SYNE4-205ENST00000490730 KNDC1Q76NI1 1749 aa31■■■□□ 2.55
SYNE4-205ENST00000490730 TECPR2O15040 1411 aa30.99■■■□□ 2.55
SYNE4-205ENST00000490730 AFF2P51816 1311 aa30.98■■■□□ 2.55
SYNE4-205ENST00000490730 ESCO1Q5FWF5 840 aa30.97■■■□□ 2.55
SYNE4-205ENST00000490730 C8orf37Q96NL8 207 aa30.97■■■□□ 2.55
SYNE4-205ENST00000490730 ABCC11Q96J66 1382 aa30.95■■■□□ 2.55
SYNE4-205ENST00000490730 PLEKHH1Q9ULM0 1364 aa30.95■■■□□ 2.55
SYNE4-205ENST00000490730 YTHDC2Q9H6S0 1430 aaKnown RBP30.95■■■□□ 2.54
SYNE4-205ENST00000490730 SOS2Q07890 1332 aaPredicted RBP30.95■■■□□ 2.54
SYNE4-205ENST00000490730 NUTM2FA1L443 756 aa30.94■■■□□ 2.54
SYNE4-205ENST00000490730 ADAMTS2O95450 1211 aa30.92■■■□□ 2.54
SYNE4-205ENST00000490730 RXRBP28702 533 aa30.92■■■□□ 2.54
SYNE4-205ENST00000490730 MYOM2P54296 1465 aa30.92■■■□□ 2.54
SYNE4-205ENST00000490730 NRXN1Q9ULB1 1477 aa30.89■■■□□ 2.54
SYNE4-205ENST00000490730 CFAP70Q5T0N1 1121 aa30.89■■■□□ 2.54
SYNE4-205ENST00000490730 C14orf93Q9H972 538 aaKnown RBP30.89■■■□□ 2.54
SYNE4-205ENST00000490730 NPHP3Q7Z494 1330 aa30.89■■■□□ 2.54
SYNE4-205ENST00000490730 XPCQ01831 940 aaPredicted RBP30.87■■■□□ 2.53
SYNE4-205ENST00000490730 FMN2Q9NZ56 1722 aa30.87■■■□□ 2.53
SYNE4-205ENST00000490730 NGLY1Q96IV0 654 aa30.86■■■□□ 2.53
SYNE4-205ENST00000490730 DHX57Q6P158 1386 aaKnown RBP30.86■■■□□ 2.53
SYNE4-205ENST00000490730 FOXO3O43524 673 aa30.85■■■□□ 2.53
SYNE4-205ENST00000490730 PXDNQ92626 1479 aa30.84■■■□□ 2.53
SYNE4-205ENST00000490730 COL22A1Q8NFW1 1626 aaPredicted RBP30.83■■■□□ 2.53
SYNE4-205ENST00000490730 QTRT2Q9H974 415 aaKnown RBP30.82■■■□□ 2.52
SYNE4-205ENST00000490730 SAFB2Q14151 953 aaKnown RBP eCLIP30.81■■■□□ 2.52
SYNE4-205ENST00000490730 KIF1AQ12756 1690 aa30.79■■■□□ 2.52
SYNE4-205ENST00000490730 CDK12Q9NYV4 1490 aaPredicted RBP30.79■■■□□ 2.52
SYNE4-205ENST00000490730 SIRT1Q96EB6 747 aa30.79■■■□□ 2.52
SYNE4-205ENST00000490730 PRAM1Q96QH2 718 aa30.78■■■□□ 2.52
SYNE4-205ENST00000490730 KDM2AQ9Y2K7 1162 aa30.78■■■□□ 2.52
SYNE4-205ENST00000490730 RGPD8O14715 1765 aaPredicted RBP30.77■■■□□ 2.52
SYNE4-205ENST00000490730 RBM6P78332 1123 aaKnown RBP30.75■■■□□ 2.51
SYNE4-205ENST00000490730 POGKQ9P215 609 aa30.75■■■□□ 2.51
SYNE4-205ENST00000490730 DCAF11Q8TEB1 546 aa30.74■■■□□ 2.51
SYNE4-205ENST00000490730 USP21Q9UK80 565 aa30.74■■■□□ 2.51
SYNE4-205ENST00000490730 RGS12O14924 1447 aa30.73■■■□□ 2.51
SYNE4-205ENST00000490730 UPF1Q92900 1129 aaKnown RBP eCLIP30.72■■■□□ 2.51
SYNE4-205ENST00000490730 DLC1Q96QB1 1528 aa30.72■■■□□ 2.51
SYNE4-205ENST00000490730 HRCP23327 699 aa30.71■■■□□ 2.51
SYNE4-205ENST00000490730 ADGRB1O14514 1584 aa30.71■■■□□ 2.51
SYNE4-205ENST00000490730 MARF1Q9Y4F3 1742 aaKnown RBP30.7■■■□□ 2.51
SYNE4-205ENST00000490730 TRAK1Q9UPV9 953 aa30.69■■■□□ 2.5
SYNE4-205ENST00000490730 KRT28Q7Z3Y7 464 aa30.68■■■□□ 2.5
SYNE4-205ENST00000490730 PHF8Q9UPP1 1060 aa30.68■■■□□ 2.5
SYNE4-205ENST00000490730 TRPC5Q9UL62 973 aaPredicted RBP30.67■■■□□ 2.5
SYNE4-205ENST00000490730 FNBP4Q8N3X1 1017 aaPredicted RBP30.66■■■□□ 2.5
SYNE4-205ENST00000490730 SPATA31A3Q5VYP0 1347 aa30.66■■■□□ 2.5
SYNE4-205ENST00000490730 HIRIP3Q9BW71 556 aaPredicted RBP30.64■■■□□ 2.5
SYNE4-205ENST00000490730 ADGRB2O60241 1585 aa30.62■■■□□ 2.49
SYNE4-205ENST00000490730 PLEKHG5O94827 1062 aa30.62■■■□□ 2.49
SYNE4-205ENST00000490730 PSME1Q06323 249 aa30.61■■■□□ 2.49
SYNE4-205ENST00000490730 MINK1Q8N4C8 1332 aaPredicted RBP30.61■■■□□ 2.49
SYNE4-205ENST00000490730 ATRNO75882 1429 aa30.61■■■□□ 2.49
SYNE4-205ENST00000490730 USP32Q8NFA0 1604 aa30.61■■■□□ 2.49
SYNE4-205ENST00000490730 TNS3Q68CZ2 1445 aa30.6■■■□□ 2.49
SYNE4-205ENST00000490730 HAP1P54257 671 aaPredicted RBP30.59■■■□□ 2.49
SYNE4-205ENST00000490730 LMOD2Q6P5Q4 547 aa30.59■■■□□ 2.49
SYNE4-205ENST00000490730 PMFBP1Q8TBY8 1022 aa30.59■■■□□ 2.49
SYNE4-205ENST00000490730 STAC3Q96MF2 364 aa30.59■■■□□ 2.49
SYNE4-205ENST00000490730 ANKARQ7Z5J8 1434 aa30.58■■■□□ 2.49
SYNE4-205ENST00000490730 BCL9LQ86UU0 1499 aa30.57■■■□□ 2.48
SYNE4-205ENST00000490730 ARHGEF28Q8N1W1 1705 aaKnown RBP30.53■■■□□ 2.48
SYNE4-205ENST00000490730 CABLES1Q8TDN4 633 aa30.53■■■□□ 2.48
SYNE4-205ENST00000490730 SBNO1A3KN83 1393 aa30.53■■■□□ 2.48
SYNE4-205ENST00000490730 EIF3AQ14152 1382 aaKnown RBP30.53■■■□□ 2.48
SYNE4-205ENST00000490730 TULP4Q9NRJ4 1543 aa30.52■■■□□ 2.48
SYNE4-205ENST00000490730 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.51■■■□□ 2.47
SYNE4-205ENST00000490730 ARHGEF10O15013 1369 aa30.5■■■□□ 2.47
SYNE4-205ENST00000490730 ATAD2Q6PL18 1390 aa30.5■■■□□ 2.47
SYNE4-205ENST00000490730 ABCA3Q99758 1704 aa30.5■■■□□ 2.47
SYNE4-205ENST00000490730 WASLO00401 505 aaPredicted RBP30.49■■■□□ 2.47
SYNE4-205ENST00000490730 PRR36Q9H6K5 1346 aa30.48■■■□□ 2.47
SYNE4-205ENST00000490730 SLIT2O94813 1529 aa30.48■■■□□ 2.47
SYNE4-205ENST00000490730 UNC5CLQ8IV45 518 aa30.47■■■□□ 2.47
SYNE4-205ENST00000490730 GJD4Q96KN9 370 aaPredicted RBP30.47■■■□□ 2.47
SYNE4-205ENST00000490730 GPRASP1Q5JY77 1395 aa30.46■■■□□ 2.47
SYNE4-205ENST00000490730 TRPM3Q9HCF6 1732 aaPredicted RBP30.45■■■□□ 2.47
SYNE4-205ENST00000490730 PLCH1Q4KWH8 1693 aa30.44■■■□□ 2.46
SYNE4-205ENST00000490730 ITSN1Q15811 1721 aa30.42■■■□□ 2.46
SYNE4-205ENST00000490730 KIAA1210Q9ULL0 1709 aa30.42■■■□□ 2.46
SYNE4-205ENST00000490730 NGDNQ8NEJ9 315 aaKnown RBP30.42■■■□□ 2.46
SYNE4-205ENST00000490730 RALGAPBQ86X10 1494 aa30.42■■■□□ 2.46
SYNE4-205ENST00000490730 GLI3P10071 1580 aa30.41■■■□□ 2.46
SYNE4-205ENST00000490730 ALS2Q96Q42 1657 aa30.39■■■□□ 2.46
SYNE4-205ENST00000490730 NWD2Q9ULI1 1742 aa30.39■■■□□ 2.45
SYNE4-205ENST00000490730 PAK3O75914 559 aaPredicted RBP30.38■■■□□ 2.45
SYNE4-205ENST00000490730 CCDC9Q9Y3X0 531 aaKnown RBP30.37■■■□□ 2.45
SYNE4-205ENST00000490730 ATP7BP35670 1465 aa30.37■■■□□ 2.45
SYNE4-205ENST00000490730 NUDT16Q96DE0 195 aaKnown RBP30.36■■■□□ 2.45
SYNE4-205ENST00000490730 NBPF1Q3BBV0 1214 aa30.35■■■□□ 2.45
SYNE4-205ENST00000490730 EP400Q96L91 3159 aa30.34■■■□□ 2.45
SYNE4-205ENST00000490730 CDK19Q9BWU1 502 aa30.34■■■□□ 2.45
SYNE4-205ENST00000490730 FAM83GA6ND36 823 aa30.33■■■□□ 2.45
SYNE4-205ENST00000490730 VPS72Q15906 364 aa30.32■■■□□ 2.44
SYNE4-205ENST00000490730 BRWD3Q6RI45 1802 aa30.3■■■□□ 2.44
SYNE4-205ENST00000490730 COL14A1Q05707 1796 aaKnown RBP30.28■■■□□ 2.44
SYNE4-205ENST00000490730 TOPAZ1Q8N9V7 1692 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms