RNA–Protein interactions for RNA: ENST00000490610.1

CACUL1-205, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-205ENST00000490610 NBPF1Q3BBV0 1214 aa12.77□□□□□ -0.37
CACUL1-205ENST00000490610 ERVK-7P63135 1459 aa12.77□□□□□ -0.37
CACUL1-205ENST00000490610 MAP3K13O43283 966 aa12.75□□□□□ -0.37
CACUL1-205ENST00000490610 NEXMIFQ5QGS0 1516 aa12.75□□□□□ -0.37
CACUL1-205ENST00000490610 SPATA31D1Q6ZQQ2 1576 aa12.75□□□□□ -0.37
CACUL1-205ENST00000490610 MYO5BQ9ULV0 1848 aa12.75□□□□□ -0.37
CACUL1-205ENST00000490610 TMEM131LA2VDJ0 1609 aa12.74□□□□□ -0.37
CACUL1-205ENST00000490610 MYO3AQ8NEV4 1616 aa12.74□□□□□ -0.37
CACUL1-205ENST00000490610 PIK3C2GO75747 1445 aa12.74□□□□□ -0.37
CACUL1-205ENST00000490610 SLC24A1O60721 1099 aa12.74□□□□□ -0.37
CACUL1-205ENST00000490610 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
CACUL1-205ENST00000490610 CHRM1P11229 460 aaPredicted RBP12.73□□□□□ -0.37
CACUL1-205ENST00000490610 MS4A3Q96HJ5 214 aa12.73□□□□□ -0.37
CACUL1-205ENST00000490610 ZFYVE9O95405 1425 aa12.72□□□□□ -0.37
CACUL1-205ENST00000490610 TMF1P82094 1093 aa12.72□□□□□ -0.37
CACUL1-205ENST00000490610 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.37
CACUL1-205ENST00000490610 CDCA8Q53HL2 280 aa12.71□□□□□ -0.37
CACUL1-205ENST00000490610 POLR3GLQ9BT43 218 aa12.71□□□□□ -0.37
CACUL1-205ENST00000490610 ESF1Q9H501 851 aaKnown RBP12.71□□□□□ -0.37
CACUL1-205ENST00000490610 VGFO15240 615 aaPredicted RBP12.7□□□□□ -0.38
CACUL1-205ENST00000490610 TESK2Q96S53 571 aa12.7□□□□□ -0.38
CACUL1-205ENST00000490610 PCDHB13Q9Y5F0 798 aa12.7□□□□□ -0.38
CACUL1-205ENST00000490610 KDM5AP29375 1690 aaKnown RBP12.7□□□□□ -0.38
CACUL1-205ENST00000490610 KTN1Q86UP2 1357 aaKnown RBP12.69□□□□□ -0.38
CACUL1-205ENST00000490610 PRKRIP1Q9H875 184 aaPredicted RBP12.69□□□□□ -0.38
CACUL1-205ENST00000490610 IDI1Q13907 227 aa12.68□□□□□ -0.38
CACUL1-205ENST00000490610 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
CACUL1-205ENST00000490610 DISP3Q9P2K9 1392 aa12.68□□□□□ -0.38
CACUL1-205ENST00000490610 SBNO2Q9Y2G9 1366 aa12.68□□□□□ -0.38
CACUL1-205ENST00000490610 CFAP70Q5T0N1 1121 aa12.67□□□□□ -0.38
CACUL1-205ENST00000490610 ADGRB1O14514 1584 aa12.67□□□□□ -0.38
CACUL1-205ENST00000490610 QRICH2Q9H0J4 1663 aa12.67□□□□□ -0.38
CACUL1-205ENST00000490610 IFNL1Q8IU54 200 aa12.66□□□□□ -0.38
CACUL1-205ENST00000490610 C14orf93Q9H972 538 aaKnown RBP12.66□□□□□ -0.38
CACUL1-205ENST00000490610 ECM2O94769 699 aaPredicted RBP12.65□□□□□ -0.38
CACUL1-205ENST00000490610 MLECQ14165 292 aa12.65□□□□□ -0.38
CACUL1-205ENST00000490610 FER1L4A9Z1Z3 1794 aa12.65□□□□□ -0.38
CACUL1-205ENST00000490610 ARHGEF28Q8N1W1 1705 aaKnown RBP12.65□□□□□ -0.38
CACUL1-205ENST00000490610 ZMYM3Q14202 1370 aa12.64□□□□□ -0.39
CACUL1-205ENST00000490610 MYOM1P52179 1685 aa12.64□□□□□ -0.39
CACUL1-205ENST00000490610 FBXO31Q5XUX0 539 aaPredicted RBP12.63□□□□□ -0.39
CACUL1-205ENST00000490610 PCDHB8Q9UN66 801 aa12.63□□□□□ -0.39
CACUL1-205ENST00000490610 A2ML1A8K2U0 1454 aa12.63□□□□□ -0.39
CACUL1-205ENST00000490610 AMER1Q5JTC6 1135 aaPredicted RBP12.62□□□□□ -0.39
CACUL1-205ENST00000490610 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
CACUL1-205ENST00000490610 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
CACUL1-205ENST00000490610 CENPJQ9HC77 1338 aaPredicted RBP12.62□□□□□ -0.39
CACUL1-205ENST00000490610 TNRQ92752 1358 aa12.61□□□□□ -0.39
CACUL1-205ENST00000490610 RALBP1Q15311 655 aa12.61□□□□□ -0.39
CACUL1-205ENST00000490610 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
CACUL1-205ENST00000490610 ZNF467Q7Z7K2 595 aaPredicted RBP12.6□□□□□ -0.39
CACUL1-205ENST00000490610 UBR1Q8IWV7 1749 aa12.59□□□□□ -0.39
CACUL1-205ENST00000490610 NLRP1Q9C000 1473 aa12.59□□□□□ -0.39
CACUL1-205ENST00000490610 C3P01024 1663 aa12.59□□□□□ -0.39
CACUL1-205ENST00000490610 MRS2Q9HD23 443 aa12.59□□□□□ -0.39
CACUL1-205ENST00000490610 RIMS2Q9UQ26 1411 aa12.59□□□□□ -0.39
CACUL1-205ENST00000490610 ALKQ9UM73 1620 aa12.59□□□□□ -0.39
CACUL1-205ENST00000490610 ASXL1Q8IXJ9 1541 aa12.58□□□□□ -0.4
CACUL1-205ENST00000490610 LHX8Q68G74 356 aa12.58□□□□□ -0.4
CACUL1-205ENST00000490610 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.58□□□□□ -0.4
CACUL1-205ENST00000490610 DNAJC5Q9H3Z4 198 aa12.58□□□□□ -0.4
CACUL1-205ENST00000490610 MYBBP1AQ9BQG0 1328 aaKnown RBP12.58□□□□□ -0.4
CACUL1-205ENST00000490610 SETD1AO15047 1707 aaKnown RBP12.57□□□□□ -0.4
CACUL1-205ENST00000490610 RGL2O15211 777 aa12.57□□□□□ -0.4
CACUL1-205ENST00000490610 HDGFP51858 240 aaKnown RBP12.57□□□□□ -0.4
CACUL1-205ENST00000490610 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
CACUL1-205ENST00000490610 PARD3Q8TEW0 1356 aa12.56□□□□□ -0.4
CACUL1-205ENST00000490610 NUTM2DQ5VT03 806 aaPredicted RBP12.55□□□□□ -0.4
CACUL1-205ENST00000490610 PUS7Q96PZ0 661 aaKnown RBP12.55□□□□□ -0.4
CACUL1-205ENST00000490610 PANK3Q9H999 370 aa12.55□□□□□ -0.4
CACUL1-205ENST00000490610 TRAK1Q9UPV9 953 aa12.55□□□□□ -0.4
CACUL1-205ENST00000490610 DLC1Q96QB1 1528 aa12.55□□□□□ -0.4
CACUL1-205ENST00000490610 YTHDC2Q9H6S0 1430 aaKnown RBP12.54□□□□□ -0.4
CACUL1-205ENST00000490610 KNDC1Q76NI1 1749 aa12.54□□□□□ -0.4
CACUL1-205ENST00000490610 RIOK3O14730 519 aaKnown RBP12.54□□□□□ -0.4
CACUL1-205ENST00000490610 PER1O15534 1290 aaPredicted RBP12.54□□□□□ -0.4
CACUL1-205ENST00000490610 ASTLQ6HA08 431 aaPredicted RBP12.54□□□□□ -0.4
CACUL1-205ENST00000490610 KNSTRNQ9Y448 316 aa12.54□□□□□ -0.4
CACUL1-205ENST00000490610 NPC1L1Q9UHC9 1359 aa12.54□□□□□ -0.4
CACUL1-205ENST00000490610 NRXN3Q9Y4C0 1643 aa12.53□□□□□ -0.4
CACUL1-205ENST00000490610 ATMINO43313 823 aaPredicted RBP12.53□□□□□ -0.4
CACUL1-205ENST00000490610 TMEM132EQ6IEE7 984 aa12.53□□□□□ -0.4
CACUL1-205ENST00000490610 PELP1Q8IZL8 1130 aaKnown RBP12.53□□□□□ -0.4
CACUL1-205ENST00000490610 EVC2Q86UK5 1308 aa12.53□□□□□ -0.4
CACUL1-205ENST00000490610 PTPRMP28827 1452 aa12.53□□□□□ -0.4
CACUL1-205ENST00000490610 TIE1P35590 1138 aa12.52□□□□□ -0.41
CACUL1-205ENST00000490610 NLRP13Q86W25 1043 aa12.52□□□□□ -0.41
CACUL1-205ENST00000490610 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.41
CACUL1-205ENST00000490610 NINLQ9Y2I6 1382 aa12.52□□□□□ -0.41
CACUL1-205ENST00000490610 USP32Q8NFA0 1604 aa12.51□□□□□ -0.41
CACUL1-205ENST00000490610 HNRNPUQ00839 825 aaKnown RBP eCLIP12.51□□□□□ -0.41
CACUL1-205ENST00000490610 TMC1Q8TDI8 760 aa12.51□□□□□ -0.41
CACUL1-205ENST00000490610 GTF3C3Q9Y5Q9 886 aa12.51□□□□□ -0.41
CACUL1-205ENST00000490610 TMEM2Q9UHN6 1383 aa12.51□□□□□ -0.41
CACUL1-205ENST00000490610 TULP4Q9NRJ4 1543 aa12.51□□□□□ -0.41
CACUL1-205ENST00000490610 LRPPRCP42704 1394 aaKnown RBP12.5□□□□□ -0.41
CACUL1-205ENST00000490610 RIMS1Q86UR5 1692 aaKnown RBP12.49□□□□□ -0.41
CACUL1-205ENST00000490610 CCDC184Q52MB2 194 aa12.49□□□□□ -0.41
CACUL1-205ENST00000490610 FAM9BQ8IZU0 186 aa12.49□□□□□ -0.41
CACUL1-205ENST00000490610 SLIT1O75093 1534 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms