RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
PRPF4B-207ENST00000490399 ATP6V1AP38606 617 aa9.68□□□□□ -0.86
PRPF4B-207ENST00000490399 CLK2P49760 499 aaKnown RBP9.68□□□□□ -0.86
PRPF4B-207ENST00000490399 USP46P62068 366 aa9.68□□□□□ -0.86
PRPF4B-207ENST00000490399 SKIV2LQ15477 1246 aaKnown RBP9.68□□□□□ -0.86
PRPF4B-207ENST00000490399 DIXDC1Q155Q3 683 aa9.68□□□□□ -0.86
PRPF4B-207ENST00000490399 SLC6A16Q9GZN6 736 aa9.68□□□□□ -0.86
PRPF4B-207ENST00000490399 PCDHB15Q9Y5E8 787 aa9.68□□□□□ -0.86
PRPF4B-207ENST00000490399 GFRA3O60609 400 aa9.67□□□□□ -0.86
PRPF4B-207ENST00000490399 RSBN1LQ6PCB5 846 aaPredicted RBP9.67□□□□□ -0.86
PRPF4B-207ENST00000490399 Q6ZNB5 142 aa9.67□□□□□ -0.86
PRPF4B-207ENST00000490399 EMID1Q96A84 441 aaPredicted RBP9.67□□□□□ -0.86
PRPF4B-207ENST00000490399 SPSB2Q99619 263 aa9.67□□□□□ -0.86
PRPF4B-207ENST00000490399 SPTLC1O15269 473 aa9.66□□□□□ -0.86
PRPF4B-207ENST00000490399 FDX1P10109 184 aa9.66□□□□□ -0.86
PRPF4B-207ENST00000490399 PCMTD1Q96MG8 357 aaPredicted RBP9.66□□□□□ -0.86
PRPF4B-207ENST00000490399 GOPCQ9HD26 462 aa9.66□□□□□ -0.86
PRPF4B-207ENST00000490399 PCDHGC3Q9UN70 934 aa9.66□□□□□ -0.86
PRPF4B-207ENST00000490399 FBXO31Q5XUX0 539 aaPredicted RBP9.65□□□□□ -0.86
PRPF4B-207ENST00000490399 ANKLE1Q8NAG6 615 aa9.65□□□□□ -0.86
PRPF4B-207ENST00000490399 SLC27A5Q9Y2P5 690 aa9.65□□□□□ -0.86
PRPF4B-207ENST00000490399 SLC19A1P41440 591 aa9.64□□□□□ -0.87
PRPF4B-207ENST00000490399 SYMPKQ92797 1274 aaKnown RBP9.64□□□□□ -0.87
PRPF4B-207ENST00000490399 QPCTQ16769 361 aa9.63□□□□□ -0.87
PRPF4B-207ENST00000490399 GRIPAP1Q4V328 841 aa9.63□□□□□ -0.87
PRPF4B-207ENST00000490399 CABLES1Q8TDN4 633 aa9.63□□□□□ -0.87
PRPF4B-207ENST00000490399 THAP11Q96EK4 314 aa9.63□□□□□ -0.87
PRPF4B-207ENST00000490399 LAPTM4AQ15012 233 aa9.62□□□□□ -0.87
PRPF4B-207ENST00000490399 PLA2G2CQ5R387 149 aa9.62□□□□□ -0.87
PRPF4B-207ENST00000490399 FMNL1O95466 1100 aaPredicted RBP9.61□□□□□ -0.87
PRPF4B-207ENST00000490399 RNF19BQ6ZMZ0 732 aa9.61□□□□□ -0.87
PRPF4B-207ENST00000490399 LIAT1Q6ZQX7 453 aa9.61□□□□□ -0.87
PRPF4B-207ENST00000490399 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.61□□□□□ -0.87
PRPF4B-207ENST00000490399 PRDM9Q9NQV7 894 aa9.61□□□□□ -0.87
PRPF4B-207ENST00000490399 PDZRN3Q9UPQ7 1066 aa9.61□□□□□ -0.87
PRPF4B-207ENST00000490399 NRG2O14511 850 aaPredicted RBP9.6□□□□□ -0.87
PRPF4B-207ENST00000490399 C6orf229H3BNL8 230 aa9.59□□□□□ -0.87
PRPF4B-207ENST00000490399 HRCP23327 699 aa9.59□□□□□ -0.87
PRPF4B-207ENST00000490399 GJA5P36382 358 aa9.59□□□□□ -0.87
PRPF4B-207ENST00000490399 RTL5Q5HYW3 569 aaPredicted RBP9.59□□□□□ -0.87
PRPF4B-207ENST00000490399 SPRYD7Q5W111 196 aa9.59□□□□□ -0.87
PRPF4B-207ENST00000490399 FAM160A2Q8N612 972 aaPredicted RBP9.59□□□□□ -0.87
PRPF4B-207ENST00000490399 NUTM2BA6NNL0 878 aaPredicted RBP9.58□□□□□ -0.88
PRPF4B-207ENST00000490399 NUTM2EB1AL46 878 aaPredicted RBP9.58□□□□□ -0.88
PRPF4B-207ENST00000490399 NUTM2DQ5VT03 806 aaPredicted RBP9.58□□□□□ -0.88
PRPF4B-207ENST00000490399 NUTM2AQ8IVF1 878 aaPredicted RBP9.58□□□□□ -0.88
PRPF4B-207ENST00000490399 LCE2BO14633 110 aa9.57□□□□□ -0.88
PRPF4B-207ENST00000490399 LILRB3O75022 631 aa9.57□□□□□ -0.88
PRPF4B-207ENST00000490399 TUSC1Q2TAM9 212 aa9.57□□□□□ -0.88
PRPF4B-207ENST00000490399 BRICD5Q6PL45 260 aa9.57□□□□□ -0.88
PRPF4B-207ENST00000490399 TRIM67Q6ZTA4 783 aa9.57□□□□□ -0.88
PRPF4B-207ENST00000490399 FCF1Q9Y324 198 aaKnown RBP9.57□□□□□ -0.88
PRPF4B-207ENST00000490399 MTMR2Q13614 643 aa9.56□□□□□ -0.88
PRPF4B-207ENST00000490399 ZNF697Q5TEC3 545 aa9.56□□□□□ -0.88
PRPF4B-207ENST00000490399 ZBTB3Q9H5J0 574 aa9.56□□□□□ -0.88
PRPF4B-207ENST00000490399 SALL2Q9Y467 1007 aaPredicted RBP9.56□□□□□ -0.88
PRPF4B-207ENST00000490399 GTF3C3Q9Y5Q9 886 aa9.56□□□□□ -0.88
PRPF4B-207ENST00000490399 Q3C1V9 767 aa9.55□□□□□ -0.88
PRPF4B-207ENST00000490399 ZNF598Q86UK7 904 aaKnown RBP9.55□□□□□ -0.88
PRPF4B-207ENST00000490399 RFC5P40937 340 aa9.54□□□□□ -0.88
PRPF4B-207ENST00000490399 PRPF38BQ5VTL8 546 aaKnown RBP9.54□□□□□ -0.88
PRPF4B-207ENST00000490399 MSS51Q4VC12 460 aa9.53□□□□□ -0.88
PRPF4B-207ENST00000490399 PPP2R2DQ66LE6 453 aa9.53□□□□□ -0.88
PRPF4B-207ENST00000490399 CFAP99D6REC4 459 aa9.52□□□□□ -0.89
PRPF4B-207ENST00000490399 TNFRSF10AO00220 468 aa9.52□□□□□ -0.89
PRPF4B-207ENST00000490399 PRR7Q8TB68 274 aa9.52□□□□□ -0.89
PRPF4B-207ENST00000490399 TSC1Q92574 1164 aa9.52□□□□□ -0.89
PRPF4B-207ENST00000490399 USB1Q9BQ65 265 aaKnown RBP9.52□□□□□ -0.89
PRPF4B-207ENST00000490399 TRAF7Q6Q0C0 670 aa9.51□□□□□ -0.89
PRPF4B-207ENST00000490399 RETREG3Q86VR2 466 aa9.51□□□□□ -0.89
PRPF4B-207ENST00000490399 AP1G2O75843 785 aa9.5□□□□□ -0.89
PRPF4B-207ENST00000490399 SPDYE5A6NIY4 337 aa9.49□□□□□ -0.89
PRPF4B-207ENST00000490399 GDF9O60383 454 aa9.48□□□□□ -0.89
PRPF4B-207ENST00000490399 FOXC1Q12948 553 aa9.48□□□□□ -0.89
PRPF4B-207ENST00000490399 RPIAP49247 311 aa9.47□□□□□ -0.89
PRPF4B-207ENST00000490399 MMP16P51512 607 aa9.47□□□□□ -0.89
PRPF4B-207ENST00000490399 PRR20EP86478 221 aa9.47□□□□□ -0.89
PRPF4B-207ENST00000490399 PRR20CP86479 221 aa9.47□□□□□ -0.89
PRPF4B-207ENST00000490399 PRR20DP86480 221 aa9.47□□□□□ -0.89
PRPF4B-207ENST00000490399 PRR20BP86481 221 aa9.47□□□□□ -0.89
PRPF4B-207ENST00000490399 PRR20AP86496 221 aa9.47□□□□□ -0.89
PRPF4B-207ENST00000490399 CTDSPL2Q05D32 466 aa9.47□□□□□ -0.89
PRPF4B-207ENST00000490399 PER1O15534 1290 aaPredicted RBP9.45□□□□□ -0.9
PRPF4B-207ENST00000490399 DXOO77932 396 aaKnown RBP9.45□□□□□ -0.9
PRPF4B-207ENST00000490399 PKD2L1Q9P0L9 805 aa9.45□□□□□ -0.9
PRPF4B-207ENST00000490399 TMEM259Q4ZIN3 620 aa9.44□□□□□ -0.9
PRPF4B-207ENST00000490399 PKDCCQ504Y2 493 aa9.44□□□□□ -0.9
PRPF4B-207ENST00000490399 LRRN4Q8WUT4 740 aa9.44□□□□□ -0.9
PRPF4B-207ENST00000490399 SNRKQ9NRH2 765 aa9.44□□□□□ -0.9
PRPF4B-207ENST00000490399 FAM187AA6NFU0 413 aa9.43□□□□□ -0.9
PRPF4B-207ENST00000490399 ZBTB24O43167 697 aaPredicted RBP9.43□□□□□ -0.9
PRPF4B-207ENST00000490399 CD2BP2O95400 341 aaKnown RBP9.43□□□□□ -0.9
PRPF4B-207ENST00000490399 USP17L8P0C7I0 530 aa9.43□□□□□ -0.9
PRPF4B-207ENST00000490399 HELBQ8NG08 1087 aaPredicted RBP9.43□□□□□ -0.9
PRPF4B-207ENST00000490399 JUNDP17535 347 aa9.42□□□□□ -0.9
PRPF4B-207ENST00000490399 CCDC24Q8N4L8 307 aa9.42□□□□□ -0.9
PRPF4B-207ENST00000490399 DGAT1O75907 488 aa9.4□□□□□ -0.9
PRPF4B-207ENST00000490399 TRIM32Q13049 653 aa9.4□□□□□ -0.9
PRPF4B-207ENST00000490399 DESI1Q6ICB0 168 aa9.4□□□□□ -0.9
PRPF4B-207ENST00000490399 LYPD8Q6UX82 237 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms