RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 SENP3-EIF4A1A0A087X0R7 540 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 PDIA4P13667 645 aaKnown RBP4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 ZKSCAN1P17029 563 aaPredicted RBP4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 HSP90AB4PQ58FF6 505 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 DZIP1LQ8IYY4 767 aaKnown RBP4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 CEP89Q96ST8 783 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 TSPYL1Q9H0U9 437 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 IPO7O95373 1038 aaKnown RBP4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 NBPF8Q3BBV2 869 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 NBPF14Q5TI25 921 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 SASS6Q6UVJ0 657 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 ARID3AQ99856 593 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 C22orf23Q9BZE7 217 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 EVC2Q86UK5 1308 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 CT47B1P0C2W7 299 aaPredicted RBP4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 CSB-PGBD3P0DP91 1061 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 RUNDC1Q96C34 613 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 FAM13BQ9NYF5 915 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 ZRANB1Q9UGI0 708 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 CIZ1Q9ULV3 898 aaPredicted RBP4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 TARBP1Q13395 1621 aaKnown RBP4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 RFX1P22670 979 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 DCTN1Q14203 1278 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 TMEM132AQ24JP5 1023 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 HSP90B2PQ58FF3 399 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 ANKRD45Q5TZF3 282 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 MNS1Q8NEH6 495 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 TSPY26PQ9H489 355 aa4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.5□□□□□ -1.69
RPS6KC1-204ENST00000490299 CPLX2Q6PUV4 134 aaKnown RBP4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 CLUAP1Q96AJ1 413 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 RUFY1Q96T51 708 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 PANK3Q9H999 370 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 SHANK2Q9UPX8 1470 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 GORABQ5T7V8 394 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 CCDC146Q8IYE0 955 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 PDCL2Q8N4E4 241 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 TIAM1Q13009 1591 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 APBB1O00213 710 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 TOM1O60784 492 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 TRIM29Q14134 588 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 RABEP1Q15276 862 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 FOXD4L1Q9NU39 408 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 MYO6Q9UM54 1294 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 UBAP1LF5GYI3 381 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 CCAR1Q8IX12 1150 aaKnown RBP4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 RASSF8Q8NHQ8 419 aa4.49□□□□□ -1.69
RPS6KC1-204ENST00000490299 SYNE3Q6ZMZ3 975 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 GCC2Q8IWJ2 1684 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 ERC2O15083 957 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 TRAK2O60296 914 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 PDE3AQ14432 1141 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 HOMER1Q86YM7 354 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 SMC3Q9UQE7 1217 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 PSMA5P28066 241 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 MCTP1Q6DN14 999 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 CCDC73Q6ZRK6 1079 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 HIP1O00291 1037 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 CLSTN1O94985 981 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 TXLNBQ8N3L3 684 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 GCC1Q96CN9 775 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 ANO2Q9NQ90 1003 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 IFT57Q9NWB7 429 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 TCOF1Q13428 1488 aaKnown RBP4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 MAST1Q9Y2H9 1570 aa4.48□□□□□ -1.69
RPS6KC1-204ENST00000490299 TEX14Q8IWB6 1497 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 RDXP35241 583 aaKnown RBP4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 PIP4K2AP48426 406 aaPredicted RBP4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 GNAI1P63096 354 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 AKAP17AQ02040 695 aaKnown RBP4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 LEKR1Q6ZMV7 388 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 AEBP1Q8IUX7 1158 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 ZNF592Q92610 1267 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 R3HCC1Q9Y3T6 440 aaKnown RBP4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 ST20-MTHFSA0A0A6YYL1 179 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 USP8P40818 1118 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 EVA1CP58658 441 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 OLFM4Q6UX06 510 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 POLA1P09884 1462 aaPredicted RBP4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 TAF7LQ5H9L4 462 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 BICD2Q8TD16 824 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 HFM1A2PYH4 1435 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 RILPL2Q969X0 211 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 COG6Q9Y2V7 657 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 PLEKHH1Q9ULM0 1364 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 UHRF1BP1LA0JNW5 1464 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 KIAA0586Q9BVV6 1533 aa4.47□□□□□ -1.69
RPS6KC1-204ENST00000490299 NCOA2Q15596 1464 aa4.46□□□□□ -1.69
RPS6KC1-204ENST00000490299 KIF2AO00139 706 aaPredicted RBP4.46□□□□□ -1.7
RPS6KC1-204ENST00000490299 PDCP20941 246 aa4.46□□□□□ -1.7
RPS6KC1-204ENST00000490299 SLC4A3P48751 1232 aa4.46□□□□□ -1.7
RPS6KC1-204ENST00000490299 CCAR2Q8N163 923 aaKnown RBP4.46□□□□□ -1.7
RPS6KC1-204ENST00000490299 CCDC191Q8NCU4 936 aa4.46□□□□□ -1.7
RPS6KC1-204ENST00000490299 SMARCE1Q969G3 411 aa4.46□□□□□ -1.7
RPS6KC1-204ENST00000490299 SLC4A10Q6U841 1118 aa4.46□□□□□ -1.7
RPS6KC1-204ENST00000490299 NOL8Q76FK4 1167 aaKnown RBP4.46□□□□□ -1.7
RPS6KC1-204ENST00000490299 BACH2Q9BYV9 841 aa4.46□□□□□ -1.7
RPS6KC1-204ENST00000490299 GRPEL1Q9HAV7 217 aa4.46□□□□□ -1.7
RPS6KC1-204ENST00000490299 ARHGEF5Q12774 1597 aa4.46□□□□□ -1.7
RPS6KC1-204ENST00000490299 DHX29Q7Z478 1369 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms