RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 TRPC5Q9UL62 973 aaPredicted RBP6.72□□□□□ -1.33
RTN1-207ENST00000490111 BLMP54132 1417 aaPredicted RBP6.72□□□□□ -1.33
RTN1-207ENST00000490111 PLEKHH2Q8IVE3 1493 aa6.72□□□□□ -1.33
RTN1-207ENST00000490111 LRRIQ1Q96JM4 1722 aa6.71□□□□□ -1.34
RTN1-207ENST00000490111 POLA2Q14181 598 aa6.71□□□□□ -1.34
RTN1-207ENST00000490111 CHMP4AQ9BY43 222 aa6.71□□□□□ -1.34
RTN1-207ENST00000490111 KDM4CQ9H3R0 1056 aa6.71□□□□□ -1.34
RTN1-207ENST00000490111 USP21Q9UK80 565 aa6.71□□□□□ -1.34
RTN1-207ENST00000490111 RTEL1-TNFRSF6BF6WH68 1400 aa6.7□□□□□ -1.34
RTN1-207ENST00000490111 SETD5Q9C0A6 1442 aa6.7□□□□□ -1.34
RTN1-207ENST00000490111 SF3B2Q13435 895 aaKnown RBP6.7□□□□□ -1.34
RTN1-207ENST00000490111 TMCO4Q5TGY1 634 aa6.7□□□□□ -1.34
RTN1-207ENST00000490111 ARHGEF1Q92888 912 aaKnown RBP6.7□□□□□ -1.34
RTN1-207ENST00000490111 LRRC59Q96AG4 307 aaKnown RBP6.7□□□□□ -1.34
RTN1-207ENST00000490111 ZNF428Q96B54 188 aa6.7□□□□□ -1.34
RTN1-207ENST00000490111 ERVK-7P63135 1459 aa6.7□□□□□ -1.34
RTN1-207ENST00000490111 TET3O43151 1660 aa6.7□□□□□ -1.34
RTN1-207ENST00000490111 GPATCH8Q9UKJ3 1502 aaKnown RBP6.7□□□□□ -1.34
RTN1-207ENST00000490111 BCL9LQ86UU0 1499 aa6.69□□□□□ -1.34
RTN1-207ENST00000490111 ADAMTS2O95450 1211 aa6.69□□□□□ -1.34
RTN1-207ENST00000490111 RBM25P49756 843 aaKnown RBP6.69□□□□□ -1.34
RTN1-207ENST00000490111 MFAP1P55081 439 aaKnown RBP6.69□□□□□ -1.34
RTN1-207ENST00000490111 C1QTNF8P60827 252 aa6.69□□□□□ -1.34
RTN1-207ENST00000490111 FLIIQ13045 1269 aa6.69□□□□□ -1.34
RTN1-207ENST00000490111 BRINP3Q76B58 766 aa6.69□□□□□ -1.34
RTN1-207ENST00000490111 AK7Q96M32 723 aa6.69□□□□□ -1.34
RTN1-207ENST00000490111 CFDP1Q9UEE9 299 aaPredicted RBP6.69□□□□□ -1.34
RTN1-207ENST00000490111 TMEM2Q9UHN6 1383 aa6.69□□□□□ -1.34
RTN1-207ENST00000490111 NCOA3Q9Y6Q9 1424 aa6.68□□□□□ -1.34
RTN1-207ENST00000490111 ARHGAP35Q9NRY4 1499 aa6.68□□□□□ -1.34
RTN1-207ENST00000490111 DCAF8L1A6NGE4 600 aa6.68□□□□□ -1.34
RTN1-207ENST00000490111 SEMA3EO15041 775 aa6.68□□□□□ -1.34
RTN1-207ENST00000490111 PLEKHG5O94827 1062 aa6.68□□□□□ -1.34
RTN1-207ENST00000490111 ATF3P18847 181 aa6.68□□□□□ -1.34
RTN1-207ENST00000490111 FOXD4L5Q5VV16 416 aaPredicted RBP6.68□□□□□ -1.34
RTN1-207ENST00000490111 FOXD4L4Q8WXT5 416 aaPredicted RBP6.68□□□□□ -1.34
RTN1-207ENST00000490111 C19orf44Q9H6X5 657 aa6.68□□□□□ -1.34
RTN1-207ENST00000490111 ZBTB47Q9UFB7 747 aaPredicted RBP6.68□□□□□ -1.34
RTN1-207ENST00000490111 ATRNO75882 1429 aa6.67□□□□□ -1.34
RTN1-207ENST00000490111 A6NJR5 290 aa6.67□□□□□ -1.34
RTN1-207ENST00000490111 AEBP1Q8IUX7 1158 aa6.67□□□□□ -1.34
RTN1-207ENST00000490111 FNBP4Q8N3X1 1017 aaPredicted RBP6.67□□□□□ -1.34
RTN1-207ENST00000490111 ZNF784Q8NCA9 323 aaPredicted RBP6.67□□□□□ -1.34
RTN1-207ENST00000490111 MAST1Q9Y2H9 1570 aa6.66□□□□□ -1.34
RTN1-207ENST00000490111 MROH1Q8NDA8 1641 aa6.66□□□□□ -1.34
RTN1-207ENST00000490111 VGFO15240 615 aaPredicted RBP6.66□□□□□ -1.34
RTN1-207ENST00000490111 TRAK2O60296 914 aa6.66□□□□□ -1.34
RTN1-207ENST00000490111 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.66□□□□□ -1.34
RTN1-207ENST00000490111 PNPLA6Q8IY17 1366 aa6.66□□□□□ -1.34
RTN1-207ENST00000490111 CAMSAP2Q08AD1 1489 aa6.66□□□□□ -1.34
RTN1-207ENST00000490111 CHD2O14647 1828 aaKnown RBP6.65□□□□□ -1.34
RTN1-207ENST00000490111 ONECUT3O60422 494 aaPredicted RBP6.65□□□□□ -1.34
RTN1-207ENST00000490111 GSE1Q14687 1217 aa6.65□□□□□ -1.34
RTN1-207ENST00000490111 EEA1Q15075 1411 aa6.65□□□□□ -1.35
RTN1-207ENST00000490111 MBD5Q9P267 1494 aa6.65□□□□□ -1.35
RTN1-207ENST00000490111 R3HDM1Q15032 1099 aaKnown RBP6.64□□□□□ -1.35
RTN1-207ENST00000490111 GJD4Q96KN9 370 aaPredicted RBP6.64□□□□□ -1.35
RTN1-207ENST00000490111 SGIP1Q9BQI5 828 aa6.64□□□□□ -1.35
RTN1-207ENST00000490111 ZNF644Q9H582 1327 aaPredicted RBP6.64□□□□□ -1.35
RTN1-207ENST00000490111 CCDC18Q5T9S5 1454 aa6.64□□□□□ -1.35
RTN1-207ENST00000490111 ASXL1Q8IXJ9 1541 aa6.64□□□□□ -1.35
RTN1-207ENST00000490111 UNC13BO14795 1591 aa6.64□□□□□ -1.35
RTN1-207ENST00000490111 PIK3C2BO00750 1634 aa6.64□□□□□ -1.35
RTN1-207ENST00000490111 BAG6P46379 1132 aa6.63□□□□□ -1.35
RTN1-207ENST00000490111 CFAP65Q6ZU64 1925 aaKnown RBP6.63□□□□□ -1.35
RTN1-207ENST00000490111 CCNB3Q8WWL7 1395 aa6.63□□□□□ -1.35
RTN1-207ENST00000490111 GZF1Q9H116 711 aaPredicted RBP6.63□□□□□ -1.35
RTN1-207ENST00000490111 EFCAB6Q5THR3 1501 aa6.62□□□□□ -1.35
RTN1-207ENST00000490111 PTCH1Q13635 1447 aa6.62□□□□□ -1.35
RTN1-207ENST00000490111 CLUAP1Q96AJ1 413 aa6.62□□□□□ -1.35
RTN1-207ENST00000490111 BCL11BQ9C0K0 894 aaPredicted RBP6.62□□□□□ -1.35
RTN1-207ENST00000490111 E9PSI1 815 aa6.61□□□□□ -1.35
RTN1-207ENST00000490111 DDX17Q92841 729 aaKnown RBP6.61□□□□□ -1.35
RTN1-207ENST00000490111 STK24Q9Y6E0 443 aa6.61□□□□□ -1.35
RTN1-207ENST00000490111 SPHKAPQ2M3C7 1700 aa6.61□□□□□ -1.35
RTN1-207ENST00000490111 CEP152O94986 1710 aa6.6□□□□□ -1.35
RTN1-207ENST00000490111 PPP1R15AO75807 674 aaPredicted RBP6.6□□□□□ -1.35
RTN1-207ENST00000490111 PDE4DQ08499 809 aa6.6□□□□□ -1.35
RTN1-207ENST00000490111 BRWD3Q6RI45 1802 aa6.6□□□□□ -1.35
RTN1-207ENST00000490111 CASKIN1Q8WXD9 1431 aa6.59□□□□□ -1.35
RTN1-207ENST00000490111 TRIM66O15016 1216 aa6.59□□□□□ -1.35
RTN1-207ENST00000490111 EN1Q05925 392 aaPredicted RBP6.59□□□□□ -1.35
RTN1-207ENST00000490111 IDI1Q13907 227 aa6.59□□□□□ -1.35
RTN1-207ENST00000490111 RSPH4AQ5TD94 716 aa6.59□□□□□ -1.35
RTN1-207ENST00000490111 PPP1R1BQ9UD71 204 aaPredicted RBP6.59□□□□□ -1.35
RTN1-207ENST00000490111 TBX22Q9Y458 520 aa6.59□□□□□ -1.35
RTN1-207ENST00000490111 DCCP43146 1447 aa6.59□□□□□ -1.36
RTN1-207ENST00000490111 MST1RQ04912 1400 aa6.59□□□□□ -1.36
RTN1-207ENST00000490111 ARHGAP31Q2M1Z3 1444 aa6.59□□□□□ -1.36
RTN1-207ENST00000490111 EP400Q96L91 3159 aa6.58□□□□□ -1.36
RTN1-207ENST00000490111 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.58□□□□□ -1.36
RTN1-207ENST00000490111 ZNF316A6NFI3 1004 aaPredicted RBP6.58□□□□□ -1.36
RTN1-207ENST00000490111 E2F4Q16254 413 aa6.58□□□□□ -1.36
RTN1-207ENST00000490111 SMYD5Q6GMV2 418 aa6.58□□□□□ -1.36
RTN1-207ENST00000490111 SEPT12Q8IYM1 358 aa6.58□□□□□ -1.36
RTN1-207ENST00000490111 RETREG2Q8NC44 543 aa6.58□□□□□ -1.36
RTN1-207ENST00000490111 ZFP91Q96JP5 570 aaPredicted RBP6.58□□□□□ -1.36
RTN1-207ENST00000490111 FAM117AQ9C073 453 aa6.58□□□□□ -1.36
RTN1-207ENST00000490111 CCDC141Q6ZP82 1450 aa6.58□□□□□ -1.36
RTN1-207ENST00000490111 RALGAPBQ86X10 1494 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms