RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 LRRC59Q96AG4 307 aaKnown RBP26.04■■□□□ 1.76
SRM-206ENST00000490101 ADGRF5Q8IZF2 1346 aa26.03■■□□□ 1.76
SRM-206ENST00000490101 PRAG1Q86YV5 1406 aa26■■□□□ 1.75
SRM-206ENST00000490101 ORAI2Q96SN7 254 aa26■■□□□ 1.75
SRM-206ENST00000490101 SPATA31E1Q6ZUB1 1445 aa25.99■■□□□ 1.75
SRM-206ENST00000490101 PNPLA6Q8IY17 1366 aa25.98■■□□□ 1.75
SRM-206ENST00000490101 AFF2P51816 1311 aa25.97■■□□□ 1.75
SRM-206ENST00000490101 STK26Q9P289 416 aa25.97■■□□□ 1.75
SRM-206ENST00000490101 IFT172Q9UG01 1749 aa25.97■■□□□ 1.75
SRM-206ENST00000490101 C8orf37Q96NL8 207 aa25.94■■□□□ 1.74
SRM-206ENST00000490101 RXRBP28702 533 aa25.92■■□□□ 1.74
SRM-206ENST00000490101 LAMC1P11047 1609 aa25.92■■□□□ 1.74
SRM-206ENST00000490101 CDC42BPGQ6DT37 1551 aa25.91■■□□□ 1.74
SRM-206ENST00000490101 TMEM132EQ6IEE7 984 aa25.91■■□□□ 1.74
SRM-206ENST00000490101 WAPLQ7Z5K2 1190 aa25.91■■□□□ 1.74
SRM-206ENST00000490101 ADAMTS2O95450 1211 aa25.9■■□□□ 1.74
SRM-206ENST00000490101 SOS2Q07890 1332 aaPredicted RBP25.89■■□□□ 1.74
SRM-206ENST00000490101 ESCO1Q5FWF5 840 aa25.89■■□□□ 1.74
SRM-206ENST00000490101 LRPPRCP42704 1394 aaKnown RBP25.89■■□□□ 1.74
SRM-206ENST00000490101 PIK3C2GO75747 1445 aa25.88■■□□□ 1.73
SRM-206ENST00000490101 NUTM2FA1L443 756 aa25.88■■□□□ 1.73
SRM-206ENST00000490101 STAC3Q96MF2 364 aa25.88■■□□□ 1.73
SRM-206ENST00000490101 TECPR2O15040 1411 aa25.88■■□□□ 1.73
SRM-206ENST00000490101 DCAF11Q8TEB1 546 aa25.87■■□□□ 1.73
SRM-206ENST00000490101 PLEKHH1Q9ULM0 1364 aa25.85■■□□□ 1.73
SRM-206ENST00000490101 NGLY1Q96IV0 654 aa25.85■■□□□ 1.73
SRM-206ENST00000490101 KNDC1Q76NI1 1749 aa25.85■■□□□ 1.73
SRM-206ENST00000490101 ABCC11Q96J66 1382 aa25.83■■□□□ 1.73
SRM-206ENST00000490101 YTHDC2Q9H6S0 1430 aaKnown RBP25.83■■□□□ 1.73
SRM-206ENST00000490101 QTRT2Q9H974 415 aaKnown RBP25.83■■□□□ 1.73
SRM-206ENST00000490101 NPHP3Q7Z494 1330 aa25.83■■□□□ 1.73
SRM-206ENST00000490101 XPCQ01831 940 aaPredicted RBP25.82■■□□□ 1.72
SRM-206ENST00000490101 NBPF8Q3BBV2 869 aa25.82■■□□□ 1.72
SRM-206ENST00000490101 CDK12Q9NYV4 1490 aaPredicted RBP25.81■■□□□ 1.72
SRM-206ENST00000490101 KDM2AQ9Y2K7 1162 aa25.81■■□□□ 1.72
SRM-206ENST00000490101 FOXO3O43524 673 aa25.8■■□□□ 1.72
SRM-206ENST00000490101 UPF1Q92900 1129 aaKnown RBP eCLIP25.8■■□□□ 1.72
SRM-206ENST00000490101 PXDNQ92626 1479 aa25.79■■□□□ 1.72
SRM-206ENST00000490101 RBM6P78332 1123 aaKnown RBP25.78■■□□□ 1.72
SRM-206ENST00000490101 CFAP70Q5T0N1 1121 aa25.78■■□□□ 1.72
SRM-206ENST00000490101 COL22A1Q8NFW1 1626 aaPredicted RBP25.77■■□□□ 1.72
SRM-206ENST00000490101 C14orf93Q9H972 538 aaKnown RBP25.77■■□□□ 1.72
SRM-206ENST00000490101 RGS12O14924 1447 aa25.77■■□□□ 1.72
SRM-206ENST00000490101 MYOM2P54296 1465 aa25.77■■□□□ 1.72
SRM-206ENST00000490101 FMN2Q9NZ56 1722 aa25.77■■□□□ 1.72
SRM-206ENST00000490101 NRXN1Q9ULB1 1477 aa25.76■■□□□ 1.71
SRM-206ENST00000490101 USP21Q9UK80 565 aa25.75■■□□□ 1.71
SRM-206ENST00000490101 SAFB2Q14151 953 aaKnown RBP eCLIP25.72■■□□□ 1.71
SRM-206ENST00000490101 RALGAPBQ86X10 1494 aa25.71■■□□□ 1.71
SRM-206ENST00000490101 SIRT1Q96EB6 747 aa25.7■■□□□ 1.7
SRM-206ENST00000490101 PRAM1Q96QH2 718 aa25.7■■□□□ 1.7
SRM-206ENST00000490101 KIF1AQ12756 1690 aa25.7■■□□□ 1.7
SRM-206ENST00000490101 FNBP4Q8N3X1 1017 aaPredicted RBP25.68■■□□□ 1.7
SRM-206ENST00000490101 TRPC5Q9UL62 973 aaPredicted RBP25.68■■□□□ 1.7
SRM-206ENST00000490101 RGPD8O14715 1765 aaPredicted RBP25.67■■□□□ 1.7
SRM-206ENST00000490101 POGKQ9P215 609 aa25.66■■□□□ 1.7
SRM-206ENST00000490101 TRPM1Q7Z4N2 1603 aa25.66■■□□□ 1.7
SRM-206ENST00000490101 MARF1Q9Y4F3 1742 aaKnown RBP25.66■■□□□ 1.7
SRM-206ENST00000490101 KRT28Q7Z3Y7 464 aa25.65■■□□□ 1.7
SRM-206ENST00000490101 ATRNO75882 1429 aa25.64■■□□□ 1.7
SRM-206ENST00000490101 PHF8Q9UPP1 1060 aa25.64■■□□□ 1.7
SRM-206ENST00000490101 SPATA31A3Q5VYP0 1347 aa25.63■■□□□ 1.69
SRM-206ENST00000490101 GPRASP1Q5JY77 1395 aa25.62■■□□□ 1.69
SRM-206ENST00000490101 PLEKHG5O94827 1062 aa25.62■■□□□ 1.69
SRM-206ENST00000490101 KIAA1210Q9ULL0 1709 aa25.62■■□□□ 1.69
SRM-206ENST00000490101 DLC1Q96QB1 1528 aa25.62■■□□□ 1.69
SRM-206ENST00000490101 TRAK1Q9UPV9 953 aa25.61■■□□□ 1.69
SRM-206ENST00000490101 ADGRB1O14514 1584 aa25.61■■□□□ 1.69
SRM-206ENST00000490101 BCL9LQ86UU0 1499 aa25.6■■□□□ 1.69
SRM-206ENST00000490101 ROCK2O75116 1388 aaKnown RBP25.58■■□□□ 1.69
SRM-206ENST00000490101 TNS3Q68CZ2 1445 aa25.58■■□□□ 1.69
SRM-206ENST00000490101 ZNF316A6NFI3 1004 aaPredicted RBP25.58■■□□□ 1.69
SRM-206ENST00000490101 HAP1P54257 671 aaPredicted RBP25.58■■□□□ 1.69
SRM-206ENST00000490101 PSME1Q06323 249 aa25.58■■□□□ 1.69
SRM-206ENST00000490101 HIRIP3Q9BW71 556 aaPredicted RBP25.58■■□□□ 1.69
SRM-206ENST00000490101 NBPF1Q3BBV0 1214 aa25.57■■□□□ 1.68
SRM-206ENST00000490101 LMOD2Q6P5Q4 547 aa25.57■■□□□ 1.68
SRM-206ENST00000490101 PMFBP1Q8TBY8 1022 aa25.57■■□□□ 1.68
SRM-206ENST00000490101 ATAD2Q6PL18 1390 aa25.56■■□□□ 1.68
SRM-206ENST00000490101 EIF4G2P78344 907 aaKnown RBP eCLIP25.56■■□□□ 1.68
SRM-206ENST00000490101 CARD11Q9BXL7 1154 aa25.56■■□□□ 1.68
SRM-206ENST00000490101 MINK1Q8N4C8 1332 aaPredicted RBP25.56■■□□□ 1.68
SRM-206ENST00000490101 USP32Q8NFA0 1604 aa25.55■■□□□ 1.68
SRM-206ENST00000490101 CABLES1Q8TDN4 633 aa25.55■■□□□ 1.68
SRM-206ENST00000490101 ADGRB2O60241 1585 aa25.55■■□□□ 1.68
SRM-206ENST00000490101 ANKARQ7Z5J8 1434 aa25.54■■□□□ 1.68
SRM-206ENST00000490101 GJD4Q96KN9 370 aaPredicted RBP25.52■■□□□ 1.68
SRM-206ENST00000490101 EP400Q96L91 3159 aa25.52■■□□□ 1.68
SRM-206ENST00000490101 HSPA5P11021 654 aaKnown RBP25.51■■□□□ 1.67
SRM-206ENST00000490101 UNC5CLQ8IV45 518 aa25.51■■□□□ 1.67
SRM-206ENST00000490101 SBNO1A3KN83 1393 aa25.51■■□□□ 1.67
SRM-206ENST00000490101 SLIT2O94813 1529 aa25.51■■□□□ 1.67
SRM-206ENST00000490101 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.51■■□□□ 1.67
SRM-206ENST00000490101 USP47Q96K76 1375 aa25.49■■□□□ 1.67
SRM-206ENST00000490101 ARHGEF10O15013 1369 aa25.48■■□□□ 1.67
SRM-206ENST00000490101 ABCA3Q99758 1704 aa25.47■■□□□ 1.67
SRM-206ENST00000490101 EIF3AQ14152 1382 aaKnown RBP25.46■■□□□ 1.67
SRM-206ENST00000490101 PRR36Q9H6K5 1346 aa25.46■■□□□ 1.67
SRM-206ENST00000490101 GLI3P10071 1580 aa25.46■■□□□ 1.67
SRM-206ENST00000490101 TULP4Q9NRJ4 1543 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms