RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 C1orf167Q5SNV9 1468 aa14.4□□□□□ -0.1
TMEM39A-210ENST00000490099 POTEAQ6S8J7 498 aa14.4□□□□□ -0.1
TMEM39A-210ENST00000490099 NALCNQ8IZF0 1738 aa14.4□□□□□ -0.1
TMEM39A-210ENST00000490099 LRRC59Q96AG4 307 aaKnown RBP14.38□□□□□ -0.11
TMEM39A-210ENST00000490099 LAMC1P11047 1609 aa14.37□□□□□ -0.11
TMEM39A-210ENST00000490099 DCAF8L1A6NGE4 600 aa14.37□□□□□ -0.11
TMEM39A-210ENST00000490099 TMEM132EQ6IEE7 984 aa14.37□□□□□ -0.11
TMEM39A-210ENST00000490099 SOS2Q07890 1332 aaPredicted RBP14.37□□□□□ -0.11
TMEM39A-210ENST00000490099 MYOM2P54296 1465 aa14.37□□□□□ -0.11
TMEM39A-210ENST00000490099 LRP6O75581 1613 aa14.37□□□□□ -0.11
TMEM39A-210ENST00000490099 NHSL1Q5SYE7 1610 aa14.37□□□□□ -0.11
TMEM39A-210ENST00000490099 SHPRHQ149N8 1683 aa14.36□□□□□ -0.11
TMEM39A-210ENST00000490099 WAPLQ7Z5K2 1190 aa14.35□□□□□ -0.11
TMEM39A-210ENST00000490099 DDX17Q92841 729 aaKnown RBP14.35□□□□□ -0.11
TMEM39A-210ENST00000490099 STAC3Q96MF2 364 aa14.35□□□□□ -0.11
TMEM39A-210ENST00000490099 ORAI2Q96SN7 254 aa14.35□□□□□ -0.11
TMEM39A-210ENST00000490099 YTHDC2Q9H6S0 1430 aaKnown RBP14.34□□□□□ -0.11
TMEM39A-210ENST00000490099 CFAP70Q5T0N1 1121 aa14.34□□□□□ -0.11
TMEM39A-210ENST00000490099 STK26Q9P289 416 aa14.34□□□□□ -0.11
TMEM39A-210ENST00000490099 CDC42BPGQ6DT37 1551 aa14.33□□□□□ -0.12
TMEM39A-210ENST00000490099 PNPLA6Q8IY17 1366 aa14.33□□□□□ -0.12
TMEM39A-210ENST00000490099 PLEKHH1Q9ULM0 1364 aa14.33□□□□□ -0.12
TMEM39A-210ENST00000490099 KNDC1Q76NI1 1749 aa14.31□□□□□ -0.12
TMEM39A-210ENST00000490099 DHX57Q6P158 1386 aaKnown RBP14.31□□□□□ -0.12
TMEM39A-210ENST00000490099 ZNF772Q68DY9 489 aaPredicted RBP14.3□□□□□ -0.12
TMEM39A-210ENST00000490099 ADGRB1O14514 1584 aa14.28□□□□□ -0.12
TMEM39A-210ENST00000490099 DLC1Q96QB1 1528 aa14.27□□□□□ -0.12
TMEM39A-210ENST00000490099 NPHP3Q7Z494 1330 aa14.27□□□□□ -0.12
TMEM39A-210ENST00000490099 ESCO1Q5FWF5 840 aa14.27□□□□□ -0.13
TMEM39A-210ENST00000490099 PXDNQ92626 1479 aa14.26□□□□□ -0.13
TMEM39A-210ENST00000490099 NUTM2BA6NNL0 878 aaPredicted RBP14.26□□□□□ -0.13
TMEM39A-210ENST00000490099 NUTM2EB1AL46 878 aaPredicted RBP14.26□□□□□ -0.13
TMEM39A-210ENST00000490099 FOXO3O43524 673 aa14.26□□□□□ -0.13
TMEM39A-210ENST00000490099 MEX3CQ5U5Q3 659 aaKnown RBP14.26□□□□□ -0.13
TMEM39A-210ENST00000490099 NUTM2AQ8IVF1 878 aaPredicted RBP14.26□□□□□ -0.13
TMEM39A-210ENST00000490099 DCAF11Q8TEB1 546 aa14.26□□□□□ -0.13
TMEM39A-210ENST00000490099 PRAM1Q96QH2 718 aa14.25□□□□□ -0.13
TMEM39A-210ENST00000490099 AFF2P51816 1311 aa14.23□□□□□ -0.13
TMEM39A-210ENST00000490099 FMN2Q9NZ56 1722 aa14.22□□□□□ -0.13
TMEM39A-210ENST00000490099 FNBP4Q8N3X1 1017 aaPredicted RBP14.22□□□□□ -0.13
TMEM39A-210ENST00000490099 KDM2AQ9Y2K7 1162 aa14.22□□□□□ -0.13
TMEM39A-210ENST00000490099 COL22A1Q8NFW1 1626 aaPredicted RBP14.22□□□□□ -0.13
TMEM39A-210ENST00000490099 CDK12Q9NYV4 1490 aaPredicted RBP14.21□□□□□ -0.13
TMEM39A-210ENST00000490099 NUTM2FA1L443 756 aa14.21□□□□□ -0.13
TMEM39A-210ENST00000490099 RXRBP28702 533 aa14.21□□□□□ -0.13
TMEM39A-210ENST00000490099 SPATA31A3Q5VYP0 1347 aa14.2□□□□□ -0.14
TMEM39A-210ENST00000490099 C8orf37Q96NL8 207 aa14.2□□□□□ -0.14
TMEM39A-210ENST00000490099 PHF8Q9UPP1 1060 aa14.2□□□□□ -0.14
TMEM39A-210ENST00000490099 TRAK1Q9UPV9 953 aa14.2□□□□□ -0.14
TMEM39A-210ENST00000490099 ANKARQ7Z5J8 1434 aa14.19□□□□□ -0.14
TMEM39A-210ENST00000490099 ADAMTS2O95450 1211 aa14.19□□□□□ -0.14
TMEM39A-210ENST00000490099 XPCQ01831 940 aaPredicted RBP14.19□□□□□ -0.14
TMEM39A-210ENST00000490099 POGKQ9P215 609 aa14.19□□□□□ -0.14
TMEM39A-210ENST00000490099 ADGRB2O60241 1585 aa14.18□□□□□ -0.14
TMEM39A-210ENST00000490099 SLC4A2P04920 1241 aa14.18□□□□□ -0.14
TMEM39A-210ENST00000490099 KRT28Q7Z3Y7 464 aa14.18□□□□□ -0.14
TMEM39A-210ENST00000490099 NGLY1Q96IV0 654 aa14.18□□□□□ -0.14
TMEM39A-210ENST00000490099 QTRT2Q9H974 415 aaKnown RBP14.18□□□□□ -0.14
TMEM39A-210ENST00000490099 RBM6P78332 1123 aaKnown RBP14.17□□□□□ -0.14
TMEM39A-210ENST00000490099 SAFB2Q14151 953 aaKnown RBP eCLIP14.17□□□□□ -0.14
TMEM39A-210ENST00000490099 KIF1AQ12756 1690 aa14.17□□□□□ -0.14
TMEM39A-210ENST00000490099 WASLO00401 505 aaPredicted RBP14.16□□□□□ -0.14
TMEM39A-210ENST00000490099 SBNO1A3KN83 1393 aa14.16□□□□□ -0.14
TMEM39A-210ENST00000490099 PRR36Q9H6K5 1346 aa14.15□□□□□ -0.14
TMEM39A-210ENST00000490099 USP32Q8NFA0 1604 aa14.15□□□□□ -0.14
TMEM39A-210ENST00000490099 BCL9LQ86UU0 1499 aa14.14□□□□□ -0.15
TMEM39A-210ENST00000490099 PSME1Q06323 249 aa14.14□□□□□ -0.15
TMEM39A-210ENST00000490099 USP21Q9UK80 565 aa14.14□□□□□ -0.15
TMEM39A-210ENST00000490099 RGPD8O14715 1765 aaPredicted RBP14.14□□□□□ -0.15
TMEM39A-210ENST00000490099 MINK1Q8N4C8 1332 aaPredicted RBP14.14□□□□□ -0.15
TMEM39A-210ENST00000490099 EIF3AQ14152 1382 aaKnown RBP14.13□□□□□ -0.15
TMEM39A-210ENST00000490099 NBPF1Q3BBV0 1214 aa14.13□□□□□ -0.15
TMEM39A-210ENST00000490099 UPF1Q92900 1129 aaKnown RBP eCLIP14.13□□□□□ -0.15
TMEM39A-210ENST00000490099 HIRIP3Q9BW71 556 aaPredicted RBP14.13□□□□□ -0.15
TMEM39A-210ENST00000490099 TRPC5Q9UL62 973 aaPredicted RBP14.13□□□□□ -0.15
TMEM39A-210ENST00000490099 ATRNO75882 1429 aa14.12□□□□□ -0.15
TMEM39A-210ENST00000490099 TNS3Q68CZ2 1445 aa14.12□□□□□ -0.15
TMEM39A-210ENST00000490099 KIAA1210Q9ULL0 1709 aa14.12□□□□□ -0.15
TMEM39A-210ENST00000490099 L3MBTL2Q969R5 705 aa14.11□□□□□ -0.15
TMEM39A-210ENST00000490099 TULP4Q9NRJ4 1543 aa14.1□□□□□ -0.15
TMEM39A-210ENST00000490099 RGS12O14924 1447 aa14.1□□□□□ -0.15
TMEM39A-210ENST00000490099 PMFBP1Q8TBY8 1022 aa14.1□□□□□ -0.15
TMEM39A-210ENST00000490099 SLIT2O94813 1529 aa14.1□□□□□ -0.15
TMEM39A-210ENST00000490099 ARHGEF10O15013 1369 aa14.09□□□□□ -0.15
TMEM39A-210ENST00000490099 ARHGEF28Q8N1W1 1705 aaKnown RBP14.09□□□□□ -0.15
TMEM39A-210ENST00000490099 NUDT16Q96DE0 195 aaKnown RBP14.08□□□□□ -0.16
TMEM39A-210ENST00000490099 SIN3AQ96ST3 1273 aa14.08□□□□□ -0.16
TMEM39A-210ENST00000490099 CDK19Q9BWU1 502 aa14.08□□□□□ -0.16
TMEM39A-210ENST00000490099 MARF1Q9Y4F3 1742 aaKnown RBP14.07□□□□□ -0.16
TMEM39A-210ENST00000490099 ZBTB22O15209 634 aa14.07□□□□□ -0.16
TMEM39A-210ENST00000490099 UNC5CLQ8IV45 518 aa14.07□□□□□ -0.16
TMEM39A-210ENST00000490099 CABLES1Q8TDN4 633 aa14.07□□□□□ -0.16
TMEM39A-210ENST00000490099 GJD4Q96KN9 370 aaPredicted RBP14.07□□□□□ -0.16
TMEM39A-210ENST00000490099 GPRASP1Q5JY77 1395 aa14.07□□□□□ -0.16
TMEM39A-210ENST00000490099 ATP7BP35670 1465 aa14.06□□□□□ -0.16
TMEM39A-210ENST00000490099 PLEKHG3A1L390 1219 aa14.06□□□□□ -0.16
TMEM39A-210ENST00000490099 CCDC61Q9Y6R9 512 aa14.06□□□□□ -0.16
TMEM39A-210ENST00000490099 TRPM3Q9HCF6 1732 aaPredicted RBP14.06□□□□□ -0.16
TMEM39A-210ENST00000490099 FAM83GA6ND36 823 aa14.05□□□□□ -0.16
TMEM39A-210ENST00000490099 POLR3AO14802 1390 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms